data_6VQL # _model_server_result.job_id LAL3b94FAV3ZS-Y6IXEyQg _model_server_result.datetime_utc '2024-12-26 13:42:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vql # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":503}' # _entry.id 6VQL # _exptl.entry_id 6VQL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.2 _cell.angle_gamma 90 _cell.entry_id 6VQL _cell.length_a 135.352 _cell.length_b 140.827 _cell.length_c 86.068 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VQL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 Q N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 189 A MET 344 1_555 A N TPO 190 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C TPO 190 A TPO 345 1_555 A N SEP 191 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? covale ? covale3 A C SEP 191 A SEP 346 1_555 A N ARG 192 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale4 B C MET 189 B MET 344 1_555 B N TPO 190 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale5 B C TPO 190 B TPO 345 1_555 B N SEP 191 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale6 B C SEP 191 B SEP 346 1_555 B N ARG 192 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale7 C C GLN 186 C GLN 341 1_555 C N TPO 187 C TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale8 C C TPO 187 C TPO 342 1_555 C N VAL 188 C VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 C C MET 189 C MET 344 1_555 C N TPO 190 C TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale10 C C TPO 190 C TPO 345 1_555 C N SEP 191 C SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale11 C C SEP 191 C SEP 346 1_555 C N ARG 192 C ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale12 D C GLN 186 D GLN 341 1_555 D N TPO 187 D TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale13 D C TPO 187 D TPO 342 1_555 D N VAL 188 D VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale14 D C MET 189 D MET 344 1_555 D N TPO 190 D TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale15 D C TPO 190 D TPO 345 1_555 D N SEP 191 D SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 D C SEP 191 D SEP 346 1_555 D N ARG 192 D ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 365 n n S O2 SO4 doub 366 n n S O3 SO4 sing 367 n n S O4 SO4 sing 368 n n # _atom_sites.entry_id 6VQL _atom_sites.fract_transf_matrix[1][1] 0.007388 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005407 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007101 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014398 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 R7S A 1 501 4000 R7S Z7A . F 3 SO4 A 1 502 12 SO4 SO4 . G 2 R7S B 1 501 4000 R7S Z7A . H 3 SO4 B 1 502 5 SO4 SO4 . I 3 SO4 B 1 503 9 SO4 SO4 . J 3 SO4 B 1 504 10 SO4 SO4 . K 3 SO4 B 1 505 11 SO4 SO4 . L 2 R7S C 1 501 4000 R7S Z7A . M 3 SO4 C 1 502 1 SO4 SO4 . N 3 SO4 C 1 503 4 SO4 SO4 . O 3 SO4 C 1 504 8 SO4 SO4 . P 2 R7S D 1 501 4000 R7S Z7A . Q 3 SO4 D 1 502 2 SO4 SO4 . R 3 SO4 D 1 503 7 SO4 SO4 . S 4 HOH A 1 601 40 HOH HOH . S 4 HOH A 2 602 47 HOH HOH . S 4 HOH A 3 603 48 HOH HOH . S 4 HOH A 4 604 18 HOH HOH . S 4 HOH A 5 605 42 HOH HOH . S 4 HOH A 6 606 36 HOH HOH . S 4 HOH A 7 607 37 HOH HOH . S 4 HOH A 8 608 13 HOH HOH . S 4 HOH A 9 609 10 HOH HOH . S 4 HOH A 10 610 5 HOH HOH . S 4 HOH A 11 611 12 HOH HOH . T 4 HOH B 1 601 52 HOH HOH . T 4 HOH B 2 602 43 HOH HOH . T 4 HOH B 3 603 39 HOH HOH . T 4 HOH B 4 604 49 HOH HOH . T 4 HOH B 5 605 1 HOH HOH . T 4 HOH B 6 606 32 HOH HOH . T 4 HOH B 7 607 20 HOH HOH . T 4 HOH B 8 608 16 HOH HOH . T 4 HOH B 9 609 44 HOH HOH . T 4 HOH B 10 610 50 HOH HOH . T 4 HOH B 11 611 41 HOH HOH . T 4 HOH B 12 612 34 HOH HOH . T 4 HOH B 13 613 31 HOH HOH . T 4 HOH B 14 614 9 HOH HOH . T 4 HOH B 15 615 27 HOH HOH . T 4 HOH B 16 616 38 HOH HOH . U 4 HOH C 1 601 28 HOH HOH . U 4 HOH C 2 602 46 HOH HOH . U 4 HOH C 3 603 25 HOH HOH . U 4 HOH C 4 604 11 HOH HOH . U 4 HOH C 5 605 4 HOH HOH . U 4 HOH C 6 606 14 HOH HOH . U 4 HOH C 7 607 29 HOH HOH . U 4 HOH C 8 608 19 HOH HOH . U 4 HOH C 9 609 35 HOH HOH . V 4 HOH D 1 601 21 HOH HOH . V 4 HOH D 2 602 22 HOH HOH . V 4 HOH D 3 603 17 HOH HOH . V 4 HOH D 4 604 30 HOH HOH . V 4 HOH D 5 605 15 HOH HOH . V 4 HOH D 6 606 24 HOH HOH . V 4 HOH D 7 607 26 HOH HOH . V 4 HOH D 8 608 6 HOH HOH . V 4 HOH D 9 609 8 HOH HOH . V 4 HOH D 10 610 23 HOH HOH . V 4 HOH D 11 611 51 HOH HOH . V 4 HOH D 12 612 7 HOH HOH . V 4 HOH D 13 613 2 HOH HOH . V 4 HOH D 14 614 3 HOH HOH . V 4 HOH D 15 615 33 HOH HOH . V 4 HOH D 16 616 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . N 3 26.724 -51.154 -14.85 1 88.2 ? S SO4 503 C 1 HETATM 2 O O1 SO4 . . . N 3 27.652 -50.848 -15.945 1 88.18 ? O1 SO4 503 C 1 HETATM 3 O O2 SO4 . . . N 3 25.755 -52.145 -15.327 1 88.27 ? O2 SO4 503 C 1 HETATM 4 O O3 SO4 . . . N 3 26.008 -49.942 -14.431 1 88.33 ? O3 SO4 503 C 1 HETATM 5 O O4 SO4 . . . N 3 27.46 -51.673 -13.702 1 87.97 ? O4 SO4 503 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #