data_6VQR
#
_model_server_result.job_id            Ysp32EVbNFy5gZushgX-Kg 
_model_server_result.datetime_utc      '2025-03-06 08:39:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vqr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":401}' 
#
_entry.id    6VQR 
#
_exptl.entry_id    6VQR 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              312.189 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R)-2-hydroxy-7-methoxy-2-(pentafluoroethyl)-2,3-dihydro-4H-1-benzopyran-4-one 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VQR 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VQR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'C12 H9 F5 O4' 
_chem_comp.formula_weight    312.189 
_chem_comp.id                R7M 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R)-2-hydroxy-7-methoxy-2-(pentafluoroethyl)-2,3-dihydro-4H-1-benzopyran-4-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F03 C16 R7M sing 275 n n 
F04 C16 R7M sing 276 n n 
C16 F05 R7M sing 277 n n 
C16 C12 R7M sing 278 n n 
O06 C10 R7M sing 279 n n 
O06 C15 R7M sing 280 n n 
O07 C10 R7M sing 281 n n 
O09 C21 R7M sing 282 n n 
O09 C19 R7M sing 283 n n 
C17 C15 R7M doub 284 n y 
C17 C19 R7M sing 285 n y 
C12 C10 R7M sing 286 n n 
C12 F01 R7M sing 287 n n 
C12 F02 R7M sing 288 n n 
C10 C11 R7M sing 289 n n 
C15 C14 R7M sing 290 n y 
C19 C20 R7M doub 291 n y 
C20 C18 R7M sing 292 n y 
C14 C18 R7M doub 293 n y 
C14 C13 R7M sing 294 n n 
C11 C13 R7M sing 295 n n 
C13 O08 R7M doub 296 n n 
C17 H1 R7M sing 297 n n 
C20 H2 R7M sing 298 n n 
C21 H3 R7M sing 299 n n 
C21 H4 R7M sing 300 n n 
C21 H5 R7M sing 301 n n 
C11 H6 R7M sing 302 n n 
C11 H7 R7M sing 303 n n 
C18 H8 R7M sing 304 n n 
O07 H9 R7M sing 305 n n 
#
_atom_sites.entry_id                     6VQR 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 R7M A 1 401 2 R7M LIG . 
G 2 R7M B 1 401 5 R7M LIG . 
H 2 R7M C 1 401 3 R7M LIG . 
I 2 R7M D 1 401 1 R7M LIG . 
J 2 R7M E 1 401 4 R7M LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 R7M . . . J 2 156.62 173.629 143.371 1 83.08 ? C10 R7M 401 E 1 
HETATM 2 C C13 R7M . . . J 2 155.347 173.481 141.202 1 83.08 ? C13 R7M 401 E 1 
HETATM 3 C C15 R7M . . . J 2 154.13 173.618 143.193 1 83.08 ? C15 R7M 401 E 1 
HETATM 4 C C17 R7M . . . J 2 152.786 173.732 143.659 1 83.08 ? C17 R7M 401 E 1 
HETATM 5 C C20 R7M . . . J 2 151.827 173.758 141.737 1 83.08 ? C20 R7M 401 E 1 
HETATM 6 C C21 R7M . . . J 2 149.884 175.023 143.1 1 83.08 ? C21 R7M 401 E 1 
HETATM 7 C C11 R7M . . . J 2 156.548 173.002 141.846 1 83.08 ? C11 R7M 401 E 1 
HETATM 8 C C12 R7M . . . J 2 157.548 172.93 144.075 1 83.08 ? C12 R7M 401 E 1 
HETATM 9 C C14 R7M . . . J 2 154.341 173.575 141.844 1 83.08 ? C14 R7M 401 E 1 
HETATM 10 C C16 R7M . . . J 2 158.95 173.231 143.551 1 83.08 ? C16 R7M 401 E 1 
HETATM 11 C C18 R7M . . . J 2 152.98 173.655 141.08 1 83.08 ? C18 R7M 401 E 1 
HETATM 12 C C19 R7M . . . J 2 151.87 173.782 142.875 1 83.08 ? C19 R7M 401 E 1 
HETATM 13 F F01 R7M . . . J 2 157.487 173.266 145.39 1 83.08 ? F01 R7M 401 E 1 
HETATM 14 F F02 R7M . . . J 2 157.304 171.598 143.946 1 83.08 ? F02 R7M 401 E 1 
HETATM 15 F F03 R7M . . . J 2 159.895 172.795 144.433 1 83.08 ? F03 R7M 401 E 1 
HETATM 16 F F04 R7M . . . J 2 159.133 172.623 142.344 1 83.08 ? F04 R7M 401 E 1 
HETATM 17 F F05 R7M . . . J 2 159.081 174.578 143.403 1 83.08 ? F05 R7M 401 E 1 
HETATM 18 O O06 R7M . . . J 2 155.222 173.553 144.078 1 83.08 ? O06 R7M 401 E 1 
HETATM 19 O O07 R7M . . . J 2 156.992 174.974 143.289 1 83.08 ? O07 R7M 401 E 1 
HETATM 20 O O08 R7M . . . J 2 155.407 173.781 140.067 1 83.08 ? O08 R7M 401 E 1 
HETATM 21 O O09 R7M . . . J 2 150.617 173.89 143.493 1 83.08 ? O09 R7M 401 E 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           21 
#