data_6VRE
#
_model_server_result.job_id            p9mOplTtK4opGj43KRM5mA 
_model_server_result.datetime_utc      '2025-07-06 15:43:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vre 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    6VRE 
#
_exptl.entry_id    6VRE 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6VRE 
_cell.length_a            77.05 
_cell.length_b            77.05 
_cell.length_c            419.38 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6VRE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
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loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6VRE 
_atom_sites.fract_transf_matrix[1][1]    0.012979 
_atom_sites.fract_transf_matrix[1][2]    0.007493 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014986 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002384 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DMS A 1 1001 1001 DMS DMS . 
D 3 RFG A 1 1002 1 RFG DRG . 
E 3 RFG B 1 1001 2 RFG DRG . 
F 4 HOH A 1 1101 58 HOH HOH . 
F 4 HOH A 2 1102 53 HOH HOH . 
F 4 HOH A 3 1103 1 HOH HOH . 
F 4 HOH A 4 1104 17 HOH HOH . 
F 4 HOH A 5 1105 33 HOH HOH . 
F 4 HOH A 6 1106 12 HOH HOH . 
F 4 HOH A 7 1107 6 HOH HOH . 
F 4 HOH A 8 1108 11 HOH HOH . 
F 4 HOH A 9 1109 62 HOH HOH . 
F 4 HOH A 10 1110 30 HOH HOH . 
F 4 HOH A 11 1111 47 HOH HOH . 
F 4 HOH A 12 1112 65 HOH HOH . 
F 4 HOH A 13 1113 34 HOH HOH . 
F 4 HOH A 14 1114 27 HOH HOH . 
F 4 HOH A 15 1115 25 HOH HOH . 
F 4 HOH A 16 1116 16 HOH HOH . 
F 4 HOH A 17 1117 22 HOH HOH . 
F 4 HOH A 18 1118 29 HOH HOH . 
F 4 HOH A 19 1119 26 HOH HOH . 
F 4 HOH A 20 1120 15 HOH HOH . 
F 4 HOH A 21 1121 20 HOH HOH . 
F 4 HOH A 22 1122 10 HOH HOH . 
F 4 HOH A 23 1123 36 HOH HOH . 
F 4 HOH A 24 1124 13 HOH HOH . 
F 4 HOH A 25 1125 7 HOH HOH . 
F 4 HOH A 26 1126 73 HOH HOH . 
F 4 HOH A 27 1127 3 HOH HOH . 
F 4 HOH A 28 1128 48 HOH HOH . 
F 4 HOH A 29 1129 46 HOH HOH . 
F 4 HOH A 30 1130 18 HOH HOH . 
F 4 HOH A 31 1131 19 HOH HOH . 
F 4 HOH A 32 1132 28 HOH HOH . 
F 4 HOH A 33 1133 38 HOH HOH . 
F 4 HOH A 34 1134 74 HOH HOH . 
F 4 HOH A 35 1135 9 HOH HOH . 
F 4 HOH A 36 1136 41 HOH HOH . 
F 4 HOH A 37 1137 39 HOH HOH . 
F 4 HOH A 38 1138 5 HOH HOH . 
F 4 HOH A 39 1139 23 HOH HOH . 
F 4 HOH A 40 1140 8 HOH HOH . 
F 4 HOH A 41 1141 70 HOH HOH . 
F 4 HOH A 42 1142 56 HOH HOH . 
F 4 HOH A 43 1143 60 HOH HOH . 
F 4 HOH A 44 1144 54 HOH HOH . 
F 4 HOH A 45 1145 72 HOH HOH . 
F 4 HOH A 46 1146 75 HOH HOH . 
F 4 HOH A 47 1147 4 HOH HOH . 
F 4 HOH A 48 1148 61 HOH HOH . 
F 4 HOH A 49 1149 67 HOH HOH . 
F 4 HOH A 50 1150 76 HOH HOH . 
F 4 HOH A 51 1151 49 HOH HOH . 
G 4 HOH B 1 1101 45 HOH HOH . 
G 4 HOH B 2 1102 66 HOH HOH . 
G 4 HOH B 3 1103 59 HOH HOH . 
G 4 HOH B 4 1104 42 HOH HOH . 
G 4 HOH B 5 1105 68 HOH HOH . 
G 4 HOH B 6 1106 40 HOH HOH . 
G 4 HOH B 7 1107 24 HOH HOH . 
G 4 HOH B 8 1108 43 HOH HOH . 
G 4 HOH B 9 1109 37 HOH HOH . 
G 4 HOH B 10 1110 64 HOH HOH . 
G 4 HOH B 11 1111 44 HOH HOH . 
G 4 HOH B 12 1112 32 HOH HOH . 
G 4 HOH B 13 1113 14 HOH HOH . 
G 4 HOH B 14 1114 51 HOH HOH . 
G 4 HOH B 15 1115 57 HOH HOH . 
G 4 HOH B 16 1116 52 HOH HOH . 
G 4 HOH B 17 1117 55 HOH HOH . 
G 4 HOH B 18 1118 71 HOH HOH . 
G 4 HOH B 19 1119 35 HOH HOH . 
G 4 HOH B 20 1120 21 HOH HOH . 
G 4 HOH B 21 1121 31 HOH HOH . 
G 4 HOH B 22 1122 69 HOH HOH . 
G 4 HOH B 23 1123 2 HOH HOH . 
G 4 HOH B 24 1124 77 HOH HOH . 
G 4 HOH B 25 1125 63 HOH HOH . 
G 4 HOH B 26 1126 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . C 2 7.875 -6.154 -13.763 1 100.33 ? S DMS 1001 A 1 
HETATM 2 O O DMS . . . C 2 6.457 -6.64 -13.682 1 95.5 ? O DMS 1001 A 1 
HETATM 3 C C1 DMS . . . C 2 8.108 -4.886 -15.044 1 96.46 ? C1 DMS 1001 A 1 
HETATM 4 C C2 DMS . . . C 2 8.897 -7.49 -14.475 1 99.81 ? C2 DMS 1001 A 1 
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_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
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