data_6VRU
#
_model_server_result.job_id            I5yO_bxWo1Zgi8aLp_bQtA 
_model_server_result.datetime_utc      '2024-12-23 07:34:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vru 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6VRU 
#
_exptl.entry_id    6VRU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6VRU 
_cell.length_a            98.555 
_cell.length_b            98.555 
_cell.length_c            81.009 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VRU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 179 n y 
N1 C5 IMD sing 180 n y 
N1 HN1 IMD sing 181 n n 
C2 N3 IMD doub 182 n y 
C2 H2 IMD sing 183 n n 
N3 C4 IMD sing 184 n y 
N3 HN3 IMD sing 185 n n 
C4 C5 IMD doub 186 n y 
C4 H4 IMD sing 187 n n 
C5 H5 IMD sing 188 n n 
#
_atom_sites.entry_id                     6VRU 
_atom_sites.fract_transf_matrix[1][1]    0.010147 
_atom_sites.fract_transf_matrix[1][2]    0.005858 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011716 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012344 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IMD A 1 401 500 IMD IMD . 
C 3 ROY A 1 402 1 ROY INH . 
D 4 ACT A 1 403 1 ACT ACT . 
E 5 HOH A 1 501 68 HOH HOH . 
E 5 HOH A 2 502 38 HOH HOH . 
E 5 HOH A 3 503 106 HOH HOH . 
E 5 HOH A 4 504 1 HOH HOH . 
E 5 HOH A 5 505 238 HOH HOH . 
E 5 HOH A 6 506 109 HOH HOH . 
E 5 HOH A 7 507 236 HOH HOH . 
E 5 HOH A 8 508 233 HOH HOH . 
E 5 HOH A 9 509 6 HOH HOH . 
E 5 HOH A 10 510 3 HOH HOH . 
E 5 HOH A 11 511 61 HOH HOH . 
E 5 HOH A 12 512 246 HOH HOH . 
E 5 HOH A 13 513 153 HOH HOH . 
E 5 HOH A 14 514 84 HOH HOH . 
E 5 HOH A 15 515 207 HOH HOH . 
E 5 HOH A 16 516 63 HOH HOH . 
E 5 HOH A 17 517 75 HOH HOH . 
E 5 HOH A 18 518 36 HOH HOH . 
E 5 HOH A 19 519 132 HOH HOH . 
E 5 HOH A 20 520 99 HOH HOH . 
E 5 HOH A 21 521 115 HOH HOH . 
E 5 HOH A 22 522 149 HOH HOH . 
E 5 HOH A 23 523 40 HOH HOH . 
E 5 HOH A 24 524 169 HOH HOH . 
E 5 HOH A 25 525 10 HOH HOH . 
E 5 HOH A 26 526 129 HOH HOH . 
E 5 HOH A 27 527 226 HOH HOH . 
E 5 HOH A 28 528 179 HOH HOH . 
E 5 HOH A 29 529 193 HOH HOH . 
E 5 HOH A 30 530 192 HOH HOH . 
E 5 HOH A 31 531 59 HOH HOH . 
E 5 HOH A 32 532 72 HOH HOH . 
E 5 HOH A 33 533 22 HOH HOH . 
E 5 HOH A 34 534 172 HOH HOH . 
E 5 HOH A 35 535 37 HOH HOH . 
E 5 HOH A 36 536 165 HOH HOH . 
E 5 HOH A 37 537 55 HOH HOH . 
E 5 HOH A 38 538 13 HOH HOH . 
E 5 HOH A 39 539 135 HOH HOH . 
E 5 HOH A 40 540 32 HOH HOH . 
E 5 HOH A 41 541 262 HOH HOH . 
E 5 HOH A 42 542 2 HOH HOH . 
E 5 HOH A 43 543 56 HOH HOH . 
E 5 HOH A 44 544 168 HOH HOH . 
E 5 HOH A 45 545 47 HOH HOH . 
E 5 HOH A 46 546 48 HOH HOH . 
E 5 HOH A 47 547 16 HOH HOH . 
E 5 HOH A 48 548 201 HOH HOH . 
E 5 HOH A 49 549 67 HOH HOH . 
E 5 HOH A 50 550 220 HOH HOH . 
E 5 HOH A 51 551 137 HOH HOH . 
E 5 HOH A 52 552 206 HOH HOH . 
E 5 HOH A 53 553 92 HOH HOH . 
E 5 HOH A 54 554 100 HOH HOH . 
E 5 HOH A 55 555 27 HOH HOH . 
E 5 HOH A 56 556 235 HOH HOH . 
E 5 HOH A 57 557 76 HOH HOH . 
E 5 HOH A 58 558 124 HOH HOH . 
E 5 HOH A 59 559 229 HOH HOH . 
E 5 HOH A 60 560 118 HOH HOH . 
E 5 HOH A 61 561 91 HOH HOH . 
E 5 HOH A 62 562 34 HOH HOH . 
E 5 HOH A 63 563 237 HOH HOH . 
E 5 HOH A 64 564 116 HOH HOH . 
E 5 HOH A 65 565 150 HOH HOH . 
E 5 HOH A 66 566 185 HOH HOH . 
E 5 HOH A 67 567 11 HOH HOH . 
E 5 HOH A 68 568 138 HOH HOH . 
E 5 HOH A 69 569 139 HOH HOH . 
E 5 HOH A 70 570 66 HOH HOH . 
E 5 HOH A 71 571 25 HOH HOH . 
E 5 HOH A 72 572 102 HOH HOH . 
E 5 HOH A 73 573 18 HOH HOH . 
E 5 HOH A 74 574 108 HOH HOH . 
E 5 HOH A 75 575 98 HOH HOH . 
E 5 HOH A 76 576 125 HOH HOH . 
E 5 HOH A 77 577 191 HOH HOH . 
E 5 HOH A 78 578 163 HOH HOH . 
E 5 HOH A 79 579 64 HOH HOH . 
E 5 HOH A 80 580 259 HOH HOH . 
E 5 HOH A 81 581 87 HOH HOH . 
E 5 HOH A 82 582 134 HOH HOH . 
E 5 HOH A 83 583 244 HOH HOH . 
E 5 HOH A 84 584 23 HOH HOH . 
E 5 HOH A 85 585 12 HOH HOH . 
E 5 HOH A 86 586 177 HOH HOH . 
E 5 HOH A 87 587 73 HOH HOH . 
E 5 HOH A 88 588 232 HOH HOH . 
E 5 HOH A 89 589 45 HOH HOH . 
E 5 HOH A 90 590 41 HOH HOH . 
E 5 HOH A 91 591 42 HOH HOH . 
E 5 HOH A 92 592 104 HOH HOH . 
E 5 HOH A 93 593 60 HOH HOH . 
E 5 HOH A 94 594 24 HOH HOH . 
E 5 HOH A 95 595 26 HOH HOH . 
E 5 HOH A 96 596 7 HOH HOH . 
E 5 HOH A 97 597 69 HOH HOH . 
E 5 HOH A 98 598 190 HOH HOH . 
E 5 HOH A 99 599 167 HOH HOH . 
E 5 HOH A 100 600 93 HOH HOH . 
E 5 HOH A 101 601 155 HOH HOH . 
E 5 HOH A 102 602 20 HOH HOH . 
E 5 HOH A 103 603 239 HOH HOH . 
E 5 HOH A 104 604 50 HOH HOH . 
E 5 HOH A 105 605 39 HOH HOH . 
E 5 HOH A 106 606 77 HOH HOH . 
E 5 HOH A 107 607 15 HOH HOH . 
E 5 HOH A 108 608 141 HOH HOH . 
E 5 HOH A 109 609 74 HOH HOH . 
E 5 HOH A 110 610 31 HOH HOH . 
E 5 HOH A 111 611 251 HOH HOH . 
E 5 HOH A 112 612 28 HOH HOH . 
E 5 HOH A 113 613 257 HOH HOH . 
E 5 HOH A 114 614 101 HOH HOH . 
E 5 HOH A 115 615 158 HOH HOH . 
E 5 HOH A 116 616 4 HOH HOH . 
E 5 HOH A 117 617 53 HOH HOH . 
E 5 HOH A 118 618 120 HOH HOH . 
E 5 HOH A 119 619 89 HOH HOH . 
E 5 HOH A 120 620 103 HOH HOH . 
E 5 HOH A 121 621 95 HOH HOH . 
E 5 HOH A 122 622 199 HOH HOH . 
E 5 HOH A 123 623 128 HOH HOH . 
E 5 HOH A 124 624 154 HOH HOH . 
E 5 HOH A 125 625 80 HOH HOH . 
E 5 HOH A 126 626 166 HOH HOH . 
E 5 HOH A 127 627 174 HOH HOH . 
E 5 HOH A 128 628 202 HOH HOH . 
E 5 HOH A 129 629 96 HOH HOH . 
E 5 HOH A 130 630 122 HOH HOH . 
E 5 HOH A 131 631 189 HOH HOH . 
E 5 HOH A 132 632 114 HOH HOH . 
E 5 HOH A 133 633 85 HOH HOH . 
E 5 HOH A 134 634 65 HOH HOH . 
E 5 HOH A 135 635 181 HOH HOH . 
E 5 HOH A 136 636 86 HOH HOH . 
E 5 HOH A 137 637 127 HOH HOH . 
E 5 HOH A 138 638 94 HOH HOH . 
E 5 HOH A 139 639 208 HOH HOH . 
E 5 HOH A 140 640 79 HOH HOH . 
E 5 HOH A 141 641 17 HOH HOH . 
E 5 HOH A 142 642 71 HOH HOH . 
E 5 HOH A 143 643 83 HOH HOH . 
E 5 HOH A 144 644 21 HOH HOH . 
E 5 HOH A 145 645 49 HOH HOH . 
E 5 HOH A 146 646 58 HOH HOH . 
E 5 HOH A 147 647 33 HOH HOH . 
E 5 HOH A 148 648 19 HOH HOH . 
E 5 HOH A 149 649 160 HOH HOH . 
E 5 HOH A 150 650 198 HOH HOH . 
E 5 HOH A 151 651 234 HOH HOH . 
E 5 HOH A 152 652 243 HOH HOH . 
E 5 HOH A 153 653 231 HOH HOH . 
E 5 HOH A 154 654 173 HOH HOH . 
E 5 HOH A 155 655 82 HOH HOH . 
E 5 HOH A 156 656 184 HOH HOH . 
E 5 HOH A 157 657 30 HOH HOH . 
E 5 HOH A 158 658 263 HOH HOH . 
E 5 HOH A 159 659 213 HOH HOH . 
E 5 HOH A 160 660 107 HOH HOH . 
E 5 HOH A 161 661 197 HOH HOH . 
E 5 HOH A 162 662 51 HOH HOH . 
E 5 HOH A 163 663 247 HOH HOH . 
E 5 HOH A 164 664 35 HOH HOH . 
E 5 HOH A 165 665 44 HOH HOH . 
E 5 HOH A 166 666 240 HOH HOH . 
E 5 HOH A 167 667 90 HOH HOH . 
E 5 HOH A 168 668 113 HOH HOH . 
E 5 HOH A 169 669 46 HOH HOH . 
E 5 HOH A 170 670 225 HOH HOH . 
E 5 HOH A 171 671 29 HOH HOH . 
E 5 HOH A 172 672 54 HOH HOH . 
E 5 HOH A 173 673 170 HOH HOH . 
E 5 HOH A 174 674 230 HOH HOH . 
E 5 HOH A 175 675 81 HOH HOH . 
E 5 HOH A 176 676 147 HOH HOH . 
E 5 HOH A 177 677 224 HOH HOH . 
E 5 HOH A 178 678 52 HOH HOH . 
E 5 HOH A 179 679 78 HOH HOH . 
E 5 HOH A 180 680 142 HOH HOH . 
E 5 HOH A 181 681 121 HOH HOH . 
E 5 HOH A 182 682 8 HOH HOH . 
E 5 HOH A 183 683 140 HOH HOH . 
E 5 HOH A 184 684 164 HOH HOH . 
E 5 HOH A 185 685 131 HOH HOH . 
E 5 HOH A 186 686 110 HOH HOH . 
E 5 HOH A 187 687 57 HOH HOH . 
E 5 HOH A 188 688 123 HOH HOH . 
E 5 HOH A 189 689 248 HOH HOH . 
E 5 HOH A 190 690 264 HOH HOH . 
E 5 HOH A 191 691 250 HOH HOH . 
E 5 HOH A 192 692 253 HOH HOH . 
E 5 HOH A 193 693 205 HOH HOH . 
E 5 HOH A 194 694 14 HOH HOH . 
E 5 HOH A 195 695 261 HOH HOH . 
E 5 HOH A 196 696 188 HOH HOH . 
E 5 HOH A 197 697 171 HOH HOH . 
E 5 HOH A 198 698 195 HOH HOH . 
E 5 HOH A 199 699 145 HOH HOH . 
E 5 HOH A 200 700 221 HOH HOH . 
E 5 HOH A 201 701 156 HOH HOH . 
E 5 HOH A 202 702 126 HOH HOH . 
E 5 HOH A 203 703 227 HOH HOH . 
E 5 HOH A 204 704 143 HOH HOH . 
E 5 HOH A 205 705 211 HOH HOH . 
E 5 HOH A 206 706 200 HOH HOH . 
E 5 HOH A 207 707 212 HOH HOH . 
E 5 HOH A 208 708 151 HOH HOH . 
E 5 HOH A 209 709 216 HOH HOH . 
E 5 HOH A 210 710 182 HOH HOH . 
E 5 HOH A 211 711 133 HOH HOH . 
E 5 HOH A 212 712 117 HOH HOH . 
E 5 HOH A 213 713 255 HOH HOH . 
E 5 HOH A 214 714 186 HOH HOH . 
E 5 HOH A 215 715 249 HOH HOH . 
E 5 HOH A 216 716 254 HOH HOH . 
E 5 HOH A 217 717 112 HOH HOH . 
E 5 HOH A 218 718 119 HOH HOH . 
E 5 HOH A 219 719 187 HOH HOH . 
E 5 HOH A 220 720 204 HOH HOH . 
E 5 HOH A 221 721 260 HOH HOH . 
E 5 HOH A 222 722 9 HOH HOH . 
E 5 HOH A 223 723 146 HOH HOH . 
E 5 HOH A 224 724 241 HOH HOH . 
E 5 HOH A 225 725 157 HOH HOH . 
E 5 HOH A 226 726 222 HOH HOH . 
E 5 HOH A 227 727 242 HOH HOH . 
E 5 HOH A 228 728 97 HOH HOH . 
E 5 HOH A 229 729 62 HOH HOH . 
E 5 HOH A 230 730 183 HOH HOH . 
E 5 HOH A 231 731 196 HOH HOH . 
E 5 HOH A 232 732 217 HOH HOH . 
E 5 HOH A 233 733 136 HOH HOH . 
E 5 HOH A 234 734 219 HOH HOH . 
E 5 HOH A 235 735 144 HOH HOH . 
E 5 HOH A 236 736 70 HOH HOH . 
E 5 HOH A 237 737 210 HOH HOH . 
E 5 HOH A 238 738 228 HOH HOH . 
E 5 HOH A 239 739 258 HOH HOH . 
E 5 HOH A 240 740 180 HOH HOH . 
E 5 HOH A 241 741 252 HOH HOH . 
E 5 HOH A 242 742 105 HOH HOH . 
E 5 HOH A 243 743 178 HOH HOH . 
E 5 HOH A 244 744 209 HOH HOH . 
E 5 HOH A 245 745 245 HOH HOH . 
E 5 HOH A 246 746 43 HOH HOH . 
E 5 HOH A 247 747 214 HOH HOH . 
E 5 HOH A 248 748 194 HOH HOH . 
E 5 HOH A 249 749 175 HOH HOH . 
E 5 HOH A 250 750 5 HOH HOH . 
E 5 HOH A 251 751 152 HOH HOH . 
E 5 HOH A 252 752 176 HOH HOH . 
E 5 HOH A 253 753 203 HOH HOH . 
E 5 HOH A 254 754 159 HOH HOH . 
E 5 HOH A 255 755 256 HOH HOH . 
E 5 HOH A 256 756 215 HOH HOH . 
E 5 HOH A 257 757 88 HOH HOH . 
E 5 HOH A 258 758 111 HOH HOH . 
E 5 HOH A 259 759 223 HOH HOH . 
E 5 HOH A 260 760 218 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . B 2 66.103 29.331 12.533 1 42.31 ? N1 IMD 401 A 1 
HETATM 2 C C2 IMD . . . B 2 66.376 30.608 12.753 1 43.04 ? C2 IMD 401 A 1 
HETATM 3 N N3 IMD . . . B 2 66.476 30.808 14.057 1 41.93 ? N3 IMD 401 A 1 
HETATM 4 C C4 IMD . . . B 2 66.262 29.631 14.682 1 42.43 ? C4 IMD 401 A 1 
HETATM 5 C C5 IMD . . . B 2 66.029 28.707 13.729 1 42.85 ? C5 IMD 401 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#