data_6VRZ
#
_model_server_result.job_id            fbJuUspDw1dSSdJgEx6iOw 
_model_server_result.datetime_utc      '2025-08-21 09:35:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vrz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    6VRZ 
#
_exptl.entry_id    6VRZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              140.908 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PRASEODYMIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.32 
_cell.angle_gamma         90 
_cell.entry_id            6VRZ 
_cell.length_a            95.048 
_cell.length_b            65.215 
_cell.length_c            111.462 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VRZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 194 A GLU 207 1_555 D PR PR . A PR 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.312 ? 
metalc ? metalc2 A OD2 ASP 198 A ASP 211 1_555 C PR PR . A PR 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.369 ? 
#
_chem_comp.formula           'Pr 3' 
_chem_comp.formula_weight    140.908 
_chem_comp.id                PR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PRASEODYMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6VRZ 
_atom_sites.fract_transf_matrix[1][1]    0.010521 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004106 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015334 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009631 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CLM A 1 501 500 CLM CLM . 
C 3 PR A 1 502 601 PR PR . 
D 3 PR A 1 503 602 PR PR . 
E 4 HOH A 1 601 710 HOH HOH . 
E 4 HOH A 2 602 703 HOH HOH . 
E 4 HOH A 3 603 799 HOH HOH . 
E 4 HOH A 4 604 758 HOH HOH . 
E 4 HOH A 5 605 701 HOH HOH . 
E 4 HOH A 6 606 786 HOH HOH . 
E 4 HOH A 7 607 704 HOH HOH . 
E 4 HOH A 8 608 750 HOH HOH . 
E 4 HOH A 9 609 709 HOH HOH . 
E 4 HOH A 10 610 733 HOH HOH . 
E 4 HOH A 11 611 706 HOH HOH . 
E 4 HOH A 12 612 727 HOH HOH . 
E 4 HOH A 13 613 705 HOH HOH . 
E 4 HOH A 14 614 731 HOH HOH . 
E 4 HOH A 15 615 757 HOH HOH . 
E 4 HOH A 16 616 793 HOH HOH . 
E 4 HOH A 17 617 732 HOH HOH . 
E 4 HOH A 18 618 807 HOH HOH . 
E 4 HOH A 19 619 809 HOH HOH . 
E 4 HOH A 20 620 702 HOH HOH . 
E 4 HOH A 21 621 781 HOH HOH . 
E 4 HOH A 22 622 772 HOH HOH . 
E 4 HOH A 23 623 778 HOH HOH . 
E 4 HOH A 24 624 798 HOH HOH . 
E 4 HOH A 25 625 726 HOH HOH . 
E 4 HOH A 26 626 738 HOH HOH . 
E 4 HOH A 27 627 711 HOH HOH . 
E 4 HOH A 28 628 745 HOH HOH . 
E 4 HOH A 29 629 771 HOH HOH . 
E 4 HOH A 30 630 780 HOH HOH . 
E 4 HOH A 31 631 795 HOH HOH . 
E 4 HOH A 32 632 715 HOH HOH . 
E 4 HOH A 33 633 720 HOH HOH . 
E 4 HOH A 34 634 721 HOH HOH . 
E 4 HOH A 35 635 729 HOH HOH . 
E 4 HOH A 36 636 713 HOH HOH . 
E 4 HOH A 37 637 752 HOH HOH . 
E 4 HOH A 38 638 730 HOH HOH . 
E 4 HOH A 39 639 777 HOH HOH . 
E 4 HOH A 40 640 773 HOH HOH . 
E 4 HOH A 41 641 769 HOH HOH . 
E 4 HOH A 42 642 790 HOH HOH . 
E 4 HOH A 43 643 707 HOH HOH . 
E 4 HOH A 44 644 724 HOH HOH . 
E 4 HOH A 45 645 734 HOH HOH . 
E 4 HOH A 46 646 801 HOH HOH . 
E 4 HOH A 47 647 764 HOH HOH . 
E 4 HOH A 48 648 746 HOH HOH . 
E 4 HOH A 49 649 749 HOH HOH . 
E 4 HOH A 50 650 770 HOH HOH . 
E 4 HOH A 51 651 760 HOH HOH . 
E 4 HOH A 52 652 736 HOH HOH . 
E 4 HOH A 53 653 802 HOH HOH . 
E 4 HOH A 54 654 796 HOH HOH . 
E 4 HOH A 55 655 810 HOH HOH . 
E 4 HOH A 56 656 756 HOH HOH . 
E 4 HOH A 57 657 735 HOH HOH . 
E 4 HOH A 58 658 762 HOH HOH . 
E 4 HOH A 59 659 716 HOH HOH . 
E 4 HOH A 60 660 765 HOH HOH . 
E 4 HOH A 61 661 806 HOH HOH . 
E 4 HOH A 62 662 718 HOH HOH . 
E 4 HOH A 63 663 714 HOH HOH . 
E 4 HOH A 64 664 768 HOH HOH . 
E 4 HOH A 65 665 779 HOH HOH . 
E 4 HOH A 66 666 791 HOH HOH . 
E 4 HOH A 67 667 761 HOH HOH . 
E 4 HOH A 68 668 742 HOH HOH . 
E 4 HOH A 69 669 719 HOH HOH . 
E 4 HOH A 70 670 748 HOH HOH . 
E 4 HOH A 71 671 755 HOH HOH . 
E 4 HOH A 72 672 754 HOH HOH . 
E 4 HOH A 73 673 751 HOH HOH . 
E 4 HOH A 74 674 753 HOH HOH . 
E 4 HOH A 75 675 774 HOH HOH . 
E 4 HOH A 76 676 722 HOH HOH . 
E 4 HOH A 77 677 712 HOH HOH . 
E 4 HOH A 78 678 717 HOH HOH . 
E 4 HOH A 79 679 739 HOH HOH . 
E 4 HOH A 80 680 794 HOH HOH . 
E 4 HOH A 81 681 783 HOH HOH . 
E 4 HOH A 82 682 763 HOH HOH . 
E 4 HOH A 83 683 784 HOH HOH . 
E 4 HOH A 84 684 725 HOH HOH . 
E 4 HOH A 85 685 789 HOH HOH . 
E 4 HOH A 86 686 785 HOH HOH . 
E 4 HOH A 87 687 747 HOH HOH . 
E 4 HOH A 88 688 788 HOH HOH . 
E 4 HOH A 89 689 759 HOH HOH . 
E 4 HOH A 90 690 776 HOH HOH . 
E 4 HOH A 91 691 737 HOH HOH . 
E 4 HOH A 92 692 775 HOH HOH . 
E 4 HOH A 93 693 743 HOH HOH . 
E 4 HOH A 94 694 767 HOH HOH . 
E 4 HOH A 95 695 811 HOH HOH . 
E 4 HOH A 96 696 803 HOH HOH . 
E 4 HOH A 97 697 797 HOH HOH . 
E 4 HOH A 98 698 766 HOH HOH . 
E 4 HOH A 99 699 723 HOH HOH . 
E 4 HOH A 100 700 805 HOH HOH . 
E 4 HOH A 101 701 787 HOH HOH . 
E 4 HOH A 102 702 740 HOH HOH . 
E 4 HOH A 103 703 800 HOH HOH . 
E 4 HOH A 104 704 792 HOH HOH . 
E 4 HOH A 105 705 808 HOH HOH . 
E 4 HOH A 106 706 728 HOH HOH . 
E 4 HOH A 107 707 744 HOH HOH . 
E 4 HOH A 108 708 804 HOH HOH . 
E 4 HOH A 109 709 708 HOH HOH . 
E 4 HOH A 110 710 782 HOH HOH . 
E 4 HOH A 111 711 741 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           PR 
_atom_site.label_atom_id         PR 
_atom_site.label_comp_id         PR 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -1.111 
_atom_site.Cartn_y               -8.813 
_atom_site.Cartn_z               31.134 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        166.35 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          PR 
_atom_site.auth_comp_id          PR 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#