data_6VS0 # _model_server_result.job_id rxDecxhXdQ4PHw3DrchkcA _model_server_result.datetime_utc '2025-08-21 11:48:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vs0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6VS0 # _exptl.entry_id 6VS0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.129 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHLORAMPHENICOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.85 _cell.angle_gamma 90 _cell.entry_id 6VS0 _cell.length_a 95.795 _cell.length_b 63.433 _cell.length_c 109.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 194 A GLU 207 1_555 D PR PR . A PR 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc2 A OD1 ASP 198 A ASP 211 1_555 C PR PR . A PR 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.048 ? metalc ? metalc3 A OD2 ASP 198 A ASP 211 1_555 C PR PR . A PR 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc4 D PR PR . A PR 503 1_555 E O HOH . A HOH 617 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 3.335 ? metalc ? metalc5 D PR PR . A PR 503 1_555 E O HOH . A HOH 625 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? # _chem_comp.formula 'C11 H12 Cl2 N2 O5' _chem_comp.formula_weight 323.129 _chem_comp.id CLM _chem_comp.mon_nstd_flag . _chem_comp.name CHLORAMPHENICOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CL1 CLM sing 70 n n C1 CL2 CLM sing 71 n n C1 C2 CLM sing 72 n n C1 H1 CLM sing 73 n n C2 O2 CLM doub 74 n n C2 N2 CLM sing 75 n n N2 C3 CLM sing 76 n n N2 HN2 CLM sing 77 n n C3 C4 CLM sing 78 n n C3 C5 CLM sing 79 n n C3 H3 CLM sing 80 n n C4 O4 CLM sing 81 n n C4 H41 CLM sing 82 n n C4 H42 CLM sing 83 n n O4 HO4 CLM sing 84 n n C5 O5 CLM sing 85 n n C5 C6 CLM sing 86 n n C5 H5 CLM sing 87 n n O5 HO5 CLM sing 88 n n C6 C7 CLM doub 89 n y C6 C11 CLM sing 90 n y C7 C8 CLM sing 91 n y C7 H7 CLM sing 92 n n C8 C9 CLM doub 93 n y C8 H8 CLM sing 94 n n C9 N9 CLM sing 95 n n C9 C10 CLM sing 96 n y N9 O9A CLM sing 97 n n N9 O9B CLM doub 98 n n C10 C11 CLM doub 99 n y C10 H10 CLM sing 100 n n C11 H11 CLM sing 101 n n # _atom_sites.entry_id 6VS0 _atom_sites.fract_transf_matrix[1][1] 0.010439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003564 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009668 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CLM A 1 501 500 CLM CLM . C 3 PR A 1 502 601 PR PR . D 3 PR A 1 503 602 PR PR . E 4 HOH A 1 601 703 HOH HOH . E 4 HOH A 2 602 701 HOH HOH . E 4 HOH A 3 603 733 HOH HOH . E 4 HOH A 4 604 778 HOH HOH . E 4 HOH A 5 605 750 HOH HOH . E 4 HOH A 6 606 727 HOH HOH . E 4 HOH A 7 607 705 HOH HOH . E 4 HOH A 8 608 704 HOH HOH . E 4 HOH A 9 609 711 HOH HOH . E 4 HOH A 10 610 708 HOH HOH . E 4 HOH A 11 611 706 HOH HOH . E 4 HOH A 12 612 710 HOH HOH . E 4 HOH A 13 613 731 HOH HOH . E 4 HOH A 14 614 732 HOH HOH . E 4 HOH A 15 615 707 HOH HOH . E 4 HOH A 16 616 729 HOH HOH . E 4 HOH A 17 617 772 HOH HOH . E 4 HOH A 18 618 720 HOH HOH . E 4 HOH A 19 619 717 HOH HOH . E 4 HOH A 20 620 723 HOH HOH . E 4 HOH A 21 621 738 HOH HOH . E 4 HOH A 22 622 726 HOH HOH . E 4 HOH A 23 623 713 HOH HOH . E 4 HOH A 24 624 779 HOH HOH . E 4 HOH A 25 625 745 HOH HOH . E 4 HOH A 26 626 728 HOH HOH . E 4 HOH A 27 627 716 HOH HOH . E 4 HOH A 28 628 730 HOH HOH . E 4 HOH A 29 629 702 HOH HOH . E 4 HOH A 30 630 721 HOH HOH . E 4 HOH A 31 631 734 HOH HOH . E 4 HOH A 32 632 752 HOH HOH . E 4 HOH A 33 633 751 HOH HOH . E 4 HOH A 34 634 715 HOH HOH . E 4 HOH A 35 635 774 HOH HOH . E 4 HOH A 36 636 736 HOH HOH . E 4 HOH A 37 637 714 HOH HOH . E 4 HOH A 38 638 769 HOH HOH . E 4 HOH A 39 639 770 HOH HOH . E 4 HOH A 40 640 765 HOH HOH . E 4 HOH A 41 641 773 HOH HOH . E 4 HOH A 42 642 754 HOH HOH . E 4 HOH A 43 643 756 HOH HOH . E 4 HOH A 44 644 749 HOH HOH . E 4 HOH A 45 645 777 HOH HOH . E 4 HOH A 46 646 760 HOH HOH . E 4 HOH A 47 647 762 HOH HOH . E 4 HOH A 48 648 766 HOH HOH . E 4 HOH A 49 649 759 HOH HOH . E 4 HOH A 50 650 740 HOH HOH . E 4 HOH A 51 651 768 HOH HOH . E 4 HOH A 52 652 763 HOH HOH . E 4 HOH A 53 653 748 HOH HOH . E 4 HOH A 54 654 780 HOH HOH . E 4 HOH A 55 655 771 HOH HOH . E 4 HOH A 56 656 725 HOH HOH . E 4 HOH A 57 657 718 HOH HOH . E 4 HOH A 58 658 757 HOH HOH . E 4 HOH A 59 659 719 HOH HOH . E 4 HOH A 60 660 741 HOH HOH . E 4 HOH A 61 661 735 HOH HOH . E 4 HOH A 62 662 722 HOH HOH . E 4 HOH A 63 663 742 HOH HOH . E 4 HOH A 64 664 739 HOH HOH . E 4 HOH A 65 665 747 HOH HOH . E 4 HOH A 66 666 775 HOH HOH . E 4 HOH A 67 667 776 HOH HOH . E 4 HOH A 68 668 712 HOH HOH . E 4 HOH A 69 669 753 HOH HOH . E 4 HOH A 70 670 746 HOH HOH . E 4 HOH A 71 671 755 HOH HOH . E 4 HOH A 72 672 743 HOH HOH . E 4 HOH A 73 673 767 HOH HOH . E 4 HOH A 74 674 744 HOH HOH . E 4 HOH A 75 675 758 HOH HOH . E 4 HOH A 76 676 737 HOH HOH . E 4 HOH A 77 677 724 HOH HOH . E 4 HOH A 78 678 764 HOH HOH . E 4 HOH A 79 679 709 HOH HOH . E 4 HOH A 80 680 761 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLM . . . B 2 -17.557 16.554 30.752 1 55.3 ? C1 CLM 501 A 1 HETATM 2 CL CL1 CLM . . . B 2 -16.243 16.962 31.902 1 62.4 ? CL1 CLM 501 A 1 HETATM 3 CL CL2 CLM . . . B 2 -17.05 16.911 29.067 1 64.47 ? CL2 CLM 501 A 1 HETATM 4 C C2 CLM . . . B 2 -17.961 15.111 30.96 1 55.27 ? C2 CLM 501 A 1 HETATM 5 O O2 CLM . . . B 2 -18.462 14.771 32.04 1 55.3 ? O2 CLM 501 A 1 HETATM 6 N N2 CLM . . . B 2 -17.763 14.242 29.958 1 64.97 ? N2 CLM 501 A 1 HETATM 7 C C3 CLM . . . B 2 -16.792 13.154 30.049 1 60.03 ? C3 CLM 501 A 1 HETATM 8 C C4 CLM . . . B 2 -16.077 13.002 28.704 1 58.15 ? C4 CLM 501 A 1 HETATM 9 O O4 CLM . . . B 2 -15.202 14.196 28.486 1 60.47 ? O4 CLM 501 A 1 HETATM 10 C C5 CLM . . . B 2 -17.41 11.837 30.569 1 57.04 ? C5 CLM 501 A 1 HETATM 11 O O5 CLM . . . B 2 -16.406 10.802 30.623 1 56.27 ? O5 CLM 501 A 1 HETATM 12 C C6 CLM . . . B 2 -18.601 11.372 29.797 1 64.7 ? C6 CLM 501 A 1 HETATM 13 C C7 CLM . . . B 2 -19.87 11.822 30.17 1 64.7 ? C7 CLM 501 A 1 HETATM 14 C C8 CLM . . . B 2 -21.001 11.401 29.471 1 62.45 ? C8 CLM 501 A 1 HETATM 15 C C9 CLM . . . B 2 -20.873 10.513 28.399 1 60.81 ? C9 CLM 501 A 1 HETATM 16 N N9 CLM . . . B 2 -22.021 10.099 27.704 1 60.9 ? N9 CLM 501 A 1 HETATM 17 O O9A CLM . . . B 2 -21.965 9.85 26.329 1 60.28 ? O9A CLM 501 A 1 HETATM 18 O O9B CLM . . . B 2 -23.086 9.961 28.288 1 63.2 ? O9B CLM 501 A 1 HETATM 19 C C10 CLM . . . B 2 -19.608 10.049 28.025 1 59.2 ? C10 CLM 501 A 1 HETATM 20 C C11 CLM . . . B 2 -18.476 10.474 28.725 1 63.68 ? C11 CLM 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 20 #