data_6VS1 # _model_server_result.job_id XERmvw-mLCykwtL53e-DlQ _model_server_result.datetime_utc '2025-08-21 10:17:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vs1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6VS1 # _exptl.entry_id 6VS1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.572 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.29 _cell.angle_gamma 90 _cell.entry_id 6VS1 _cell.length_a 94.728 _cell.length_b 70.405 _cell.length_c 112.898 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VS1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OD1 _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 198 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 211 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id PR _struct_conn.ptnr2_label_comp_id PR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PR _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 3.468 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H40 O4' _chem_comp.formula_weight 392.572 _chem_comp.id DXC _chem_comp.mon_nstd_flag . _chem_comp.name '(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'DEOXYCHOLIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DXC sing 83 n n C1 C6 DXC sing 84 n n C1 O2 DXC sing 85 n n C1 H1 DXC sing 86 n n C2 C3 DXC sing 87 n n C2 H22 DXC sing 88 n n C2 H21 DXC sing 89 n n C3 C4 DXC sing 90 n n C3 C7 DXC sing 91 n n C3 H3 DXC sing 92 n n C4 C5 DXC sing 93 n n C4 C10 DXC sing 94 n n C4 C18 DXC sing 95 n n C5 C6 DXC sing 96 n n C5 H52 DXC sing 97 n n C5 H51 DXC sing 98 n n C6 H62 DXC sing 99 n n C6 H61 DXC sing 100 n n C7 C8 DXC sing 101 n n C7 H72 DXC sing 102 n n C7 H71 DXC sing 103 n n C8 C9 DXC sing 104 n n C8 H82 DXC sing 105 n n C8 H81 DXC sing 106 n n C9 C10 DXC sing 107 n n C9 C11 DXC sing 108 n n C9 H9 DXC sing 109 n n C10 C14 DXC sing 110 n n C10 H10 DXC sing 111 n n C11 C12 DXC sing 112 n n C11 C15 DXC sing 113 n n C11 H11 DXC sing 114 n n C12 C13 DXC sing 115 n n C12 C17 DXC sing 116 n n C12 C20 DXC sing 117 n n C13 C14 DXC sing 118 n n C13 O1 DXC sing 119 n n C13 H13 DXC sing 120 n n C14 H142 DXC sing 121 n n C14 H141 DXC sing 122 n n C15 C16 DXC sing 123 n n C15 H152 DXC sing 124 n n C15 H151 DXC sing 125 n n C16 C17 DXC sing 126 n n C16 H162 DXC sing 127 n n C16 H161 DXC sing 128 n n C17 C19 DXC sing 129 n n C17 H17 DXC sing 130 n n C18 H183 DXC sing 131 n n C18 H182 DXC sing 132 n n C18 H181 DXC sing 133 n n C19 C21 DXC sing 134 n n C19 C24 DXC sing 135 n n C19 H19 DXC sing 136 n n O1 H1O1 DXC sing 137 n n O2 H2 DXC sing 138 n n C20 H203 DXC sing 139 n n C20 H202 DXC sing 140 n n C20 H201 DXC sing 141 n n C21 C22 DXC sing 142 n n C21 H212 DXC sing 143 n n C21 H211 DXC sing 144 n n C22 C23 DXC sing 145 n n C22 H222 DXC sing 146 n n C22 H221 DXC sing 147 n n C23 O3 DXC doub 148 n n C23 O4 DXC sing 149 n n O4 HO4 DXC sing 150 n n C24 H243 DXC sing 151 n n C24 H242 DXC sing 152 n n C24 H241 DXC sing 153 n n # _atom_sites.entry_id 6VS1 _atom_sites.fract_transf_matrix[1][1] 0.010557 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004327 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009573 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PR A 1 501 1 PR PR . C 3 DXC A 1 502 500 DXC DXC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DXC . . . C 3 -17.66 19.192 30.037 1 119.45 ? C1 DXC 502 A 1 HETATM 2 C C2 DXC . . . C 3 -18.776 18.163 30.185 1 118.16 ? C2 DXC 502 A 1 HETATM 3 C C3 DXC . . . C 3 -18.249 16.885 30.861 1 121.22 ? C3 DXC 502 A 1 HETATM 4 C C4 DXC . . . C 3 -16.948 16.269 30.253 1 117.51 ? C4 DXC 502 A 1 HETATM 5 C C5 DXC . . . C 3 -15.986 17.337 29.685 1 122.28 ? C5 DXC 502 A 1 HETATM 6 C C6 DXC . . . C 3 -16.616 18.603 29.093 1 119.09 ? C6 DXC 502 A 1 HETATM 7 C C7 DXC . . . C 3 -19.434 15.922 31.051 1 118.37 ? C7 DXC 502 A 1 HETATM 8 C C8 DXC . . . C 3 -19.602 14.862 29.959 1 116.04 ? C8 DXC 502 A 1 HETATM 9 C C9 DXC . . . C 3 -18.291 14.148 29.621 1 120.99 ? C9 DXC 502 A 1 HETATM 10 C C10 DXC . . . C 3 -17.225 15.178 29.183 1 117.6 ? C10 DXC 502 A 1 HETATM 11 C C11 DXC . . . C 3 -18.442 13.07 28.527 1 117 ? C11 DXC 502 A 1 HETATM 12 C C12 DXC . . . C 3 -17.162 12.28 28.255 1 120.86 ? C12 DXC 502 A 1 HETATM 13 C C13 DXC . . . C 3 -16.104 13.271 27.742 1 120.74 ? C13 DXC 502 A 1 HETATM 14 C C14 DXC . . . C 3 -15.931 14.511 28.648 1 118.63 ? C14 DXC 502 A 1 HETATM 15 C C15 DXC . . . C 3 -19.587 12.065 28.607 1 122.94 ? C15 DXC 502 A 1 HETATM 16 C C16 DXC . . . C 3 -19.128 10.945 27.668 1 116.47 ? C16 DXC 502 A 1 HETATM 17 C C17 DXC . . . C 3 -17.668 11.227 27.251 1 124.14 ? C17 DXC 502 A 1 HETATM 18 C C18 DXC . . . C 3 -16.184 15.637 31.422 1 119.76 ? C18 DXC 502 A 1 HETATM 19 C C19 DXC . . . C 3 -16.81 9.963 27.013 1 117.92 ? C19 DXC 502 A 1 HETATM 20 O O1 DXC . . . C 3 -16.381 13.693 26.395 1 118.18 ? O1 DXC 502 A 1 HETATM 21 O O2 DXC . . . C 3 -18.179 20.416 29.51 1 118.36 ? O2 DXC 502 A 1 HETATM 22 C C20 DXC . . . C 3 -16.639 11.6 29.532 1 115.46 ? C20 DXC 502 A 1 HETATM 23 C C21 DXC . . . C 3 -17.532 8.941 26.132 1 110.75 ? C21 DXC 502 A 1 HETATM 24 C C22 DXC . . . C 3 -17.699 7.594 26.831 1 114.56 ? C22 DXC 502 A 1 HETATM 25 C C23 DXC . . . C 3 -19.056 7.533 27.492 1 115.55 ? C23 DXC 502 A 1 HETATM 26 O O3 DXC . . . C 3 -19.15 7.794 28.714 1 116.95 ? O3 DXC 502 A 1 HETATM 27 O O4 DXC . . . C 3 -20.037 7.222 26.78 1 122.95 ? O4 DXC 502 A 1 HETATM 28 C C24 DXC . . . C 3 -15.446 10.256 26.384 1 124.34 ? C24 DXC 502 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 28 #