data_6VSO # _model_server_result.job_id KjnR2d-9e7SlwKPFFHJUPQ _model_server_result.datetime_utc '2024-11-08 05:47:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vso # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":201}' # _entry.id 6VSO # _exptl.entry_id 6VSO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6VSO _cell.length_a 142 _cell.length_b 142 _cell.length_c 67 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,M,DA 1 1 C,D,N,O,P,Q,R,EA 2 1 E,F,S,T,U,V,W,X,Y,Z,AA,BA,CA,FA,GA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 Z N N ? 2 AA N N ? 2 BA N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 201 n n N O2 NO3 sing 202 n n N O3 NO3 sing 203 n n # _atom_sites.entry_id 6VSO _atom_sites.fract_transf_matrix[1][1] 0.007042 _atom_sites.fract_transf_matrix[1][2] 0.004066 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 NO3 A 1 201 151 NO3 NO3 . H 2 NO3 A 1 202 152 NO3 NO3 . I 2 NO3 A 1 203 153 NO3 NO3 . J 2 NO3 A 1 204 154 NO3 NO3 . K 2 NO3 A 1 205 158 NO3 NO3 . L 2 NO3 B 1 201 151 NO3 NO3 . M 2 NO3 B 1 202 157 NO3 NO3 . N 2 NO3 C 1 201 156 NO3 NO3 . O 2 NO3 C 1 202 151 NO3 NO3 . P 2 NO3 C 1 203 158 NO3 NO3 . Q 2 NO3 D 1 201 151 NO3 NO3 . R 2 NO3 D 1 202 154 NO3 NO3 . S 2 NO3 E 1 201 151 NO3 NO3 . T 2 NO3 E 1 202 152 NO3 NO3 . U 2 NO3 E 1 203 153 NO3 NO3 . V 2 NO3 E 1 204 154 NO3 NO3 . W 2 NO3 E 1 205 158 NO3 NO3 . X 3 GOL E 1 206 1 GOL GOL . Y 3 GOL E 1 207 3 GOL GOL . Z 2 NO3 F 1 201 151 NO3 NO3 . AA 2 NO3 F 1 202 155 NO3 NO3 . BA 2 NO3 F 1 203 157 NO3 NO3 . CA 3 GOL F 1 204 2 GOL GOL . DA 4 HOH A 1 301 10 HOH HOH . DA 4 HOH A 2 302 2 HOH HOH . EA 4 HOH C 1 301 11 HOH HOH . EA 4 HOH C 2 302 9 HOH HOH . EA 4 HOH C 3 303 4 HOH HOH . EA 4 HOH C 4 304 8 HOH HOH . EA 4 HOH C 5 305 6 HOH HOH . FA 4 HOH E 1 301 7 HOH HOH . FA 4 HOH E 2 302 5 HOH HOH . GA 4 HOH F 1 301 1 HOH HOH . GA 4 HOH F 2 302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . S 2 39.03 56.078 34.062 1 44.81 ? N NO3 201 E 1 HETATM 2 O O1 NO3 . . . S 2 39.583 54.941 34.117 1 44.44 ? O1 NO3 201 E 1 HETATM 3 O O2 NO3 . . . S 2 37.766 56.18 34.068 1 44.17 ? O2 NO3 201 E 1 HETATM 4 O O3 NO3 . . . S 2 39.754 57.111 34.003 1 43.29 ? O3 NO3 201 E 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #