data_6VTE # _model_server_result.job_id QaP32-c8DFrnCOX4rrkHSw _model_server_result.datetime_utc '2024-12-18 10:19:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6VTE # _exptl.entry_id 6VTE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6VTE _cell.length_a 54.916 _cell.length_b 54.916 _cell.length_c 102.244 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O3P AMP . A AMP 401 1_555 C MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc2 C MN MN . A MN 402 1_555 D O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 C MN MN . A MN 402 1_555 D O HOH . A HOH 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc4 C MN MN . A MN 402 1_555 D O HOH . A HOH 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc5 C MN MN . A MN 402 1_555 D O HOH . A HOH 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc6 C MN MN . A MN 402 1_555 D O HOH . A HOH 662 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6VTE _atom_sites.fract_transf_matrix[1][1] 0.01821 _atom_sites.fract_transf_matrix[1][2] 0.010513 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009781 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMP A 1 401 401 AMP AMP . C 3 MN A 1 402 1 MN MN . D 4 HOH A 1 501 101 HOH HOH . D 4 HOH A 2 502 137 HOH HOH . D 4 HOH A 3 503 174 HOH HOH . D 4 HOH A 4 504 42 HOH HOH . D 4 HOH A 5 505 97 HOH HOH . D 4 HOH A 6 506 185 HOH HOH . D 4 HOH A 7 507 163 HOH HOH . D 4 HOH A 8 508 160 HOH HOH . D 4 HOH A 9 509 158 HOH HOH . D 4 HOH A 10 510 63 HOH HOH . D 4 HOH A 11 511 139 HOH HOH . D 4 HOH A 12 512 40 HOH HOH . D 4 HOH A 13 513 18 HOH HOH . D 4 HOH A 14 514 11 HOH HOH . D 4 HOH A 15 515 142 HOH HOH . D 4 HOH A 16 516 89 HOH HOH . D 4 HOH A 17 517 193 HOH HOH . D 4 HOH A 18 518 49 HOH HOH . D 4 HOH A 19 519 55 HOH HOH . D 4 HOH A 20 520 151 HOH HOH . D 4 HOH A 21 521 87 HOH HOH . D 4 HOH A 22 522 25 HOH HOH . D 4 HOH A 23 523 37 HOH HOH . D 4 HOH A 24 524 38 HOH HOH . D 4 HOH A 25 525 112 HOH HOH . D 4 HOH A 26 526 109 HOH HOH . D 4 HOH A 27 527 96 HOH HOH . D 4 HOH A 28 528 184 HOH HOH . D 4 HOH A 29 529 29 HOH HOH . D 4 HOH A 30 530 144 HOH HOH . D 4 HOH A 31 531 189 HOH HOH . D 4 HOH A 32 532 135 HOH HOH . D 4 HOH A 33 533 60 HOH HOH . D 4 HOH A 34 534 79 HOH HOH . D 4 HOH A 35 535 84 HOH HOH . D 4 HOH A 36 536 161 HOH HOH . D 4 HOH A 37 537 129 HOH HOH . D 4 HOH A 38 538 100 HOH HOH . D 4 HOH A 39 539 103 HOH HOH . D 4 HOH A 40 540 58 HOH HOH . D 4 HOH A 41 541 56 HOH HOH . D 4 HOH A 42 542 106 HOH HOH . D 4 HOH A 43 543 47 HOH HOH . D 4 HOH A 44 544 48 HOH HOH . D 4 HOH A 45 545 192 HOH HOH . D 4 HOH A 46 546 173 HOH HOH . D 4 HOH A 47 547 116 HOH HOH . D 4 HOH A 48 548 14 HOH HOH . D 4 HOH A 49 549 59 HOH HOH . D 4 HOH A 50 550 167 HOH HOH . D 4 HOH A 51 551 83 HOH HOH . D 4 HOH A 52 552 19 HOH HOH . D 4 HOH A 53 553 8 HOH HOH . D 4 HOH A 54 554 115 HOH HOH . D 4 HOH A 55 555 169 HOH HOH . D 4 HOH A 56 556 182 HOH HOH . D 4 HOH A 57 557 74 HOH HOH . D 4 HOH A 58 558 125 HOH HOH . D 4 HOH A 59 559 175 HOH HOH . D 4 HOH A 60 560 3 HOH HOH . D 4 HOH A 61 561 31 HOH HOH . D 4 HOH A 62 562 2 HOH HOH . D 4 HOH A 63 563 24 HOH HOH . D 4 HOH A 64 564 1 HOH HOH . D 4 HOH A 65 565 57 HOH HOH . D 4 HOH A 66 566 44 HOH HOH . D 4 HOH A 67 567 105 HOH HOH . D 4 HOH A 68 568 21 HOH HOH . D 4 HOH A 69 569 6 HOH HOH . D 4 HOH A 70 570 152 HOH HOH . D 4 HOH A 71 571 9 HOH HOH . D 4 HOH A 72 572 62 HOH HOH . D 4 HOH A 73 573 43 HOH HOH . D 4 HOH A 74 574 4 HOH HOH . D 4 HOH A 75 575 26 HOH HOH . D 4 HOH A 76 576 85 HOH HOH . D 4 HOH A 77 577 16 HOH HOH . D 4 HOH A 78 578 5 HOH HOH . D 4 HOH A 79 579 54 HOH HOH . D 4 HOH A 80 580 75 HOH HOH . D 4 HOH A 81 581 171 HOH HOH . D 4 HOH A 82 582 146 HOH HOH . D 4 HOH A 83 583 52 HOH HOH . D 4 HOH A 84 584 34 HOH HOH . D 4 HOH A 85 585 7 HOH HOH . D 4 HOH A 86 586 71 HOH HOH . D 4 HOH A 87 587 136 HOH HOH . D 4 HOH A 88 588 17 HOH HOH . D 4 HOH A 89 589 145 HOH HOH . D 4 HOH A 90 590 187 HOH HOH . D 4 HOH A 91 591 36 HOH HOH . D 4 HOH A 92 592 22 HOH HOH . D 4 HOH A 93 593 30 HOH HOH . D 4 HOH A 94 594 95 HOH HOH . D 4 HOH A 95 595 123 HOH HOH . D 4 HOH A 96 596 114 HOH HOH . D 4 HOH A 97 597 102 HOH HOH . D 4 HOH A 98 598 90 HOH HOH . D 4 HOH A 99 599 67 HOH HOH . D 4 HOH A 100 600 107 HOH HOH . D 4 HOH A 101 601 154 HOH HOH . D 4 HOH A 102 602 78 HOH HOH . D 4 HOH A 103 603 120 HOH HOH . D 4 HOH A 104 604 72 HOH HOH . D 4 HOH A 105 605 86 HOH HOH . D 4 HOH A 106 606 46 HOH HOH . D 4 HOH A 107 607 91 HOH HOH . D 4 HOH A 108 608 13 HOH HOH . D 4 HOH A 109 609 61 HOH HOH . D 4 HOH A 110 610 81 HOH HOH . D 4 HOH A 111 611 94 HOH HOH . D 4 HOH A 112 612 27 HOH HOH . D 4 HOH A 113 613 33 HOH HOH . D 4 HOH A 114 614 132 HOH HOH . D 4 HOH A 115 615 150 HOH HOH . D 4 HOH A 116 616 88 HOH HOH . D 4 HOH A 117 617 51 HOH HOH . D 4 HOH A 118 618 172 HOH HOH . D 4 HOH A 119 619 118 HOH HOH . D 4 HOH A 120 620 12 HOH HOH . D 4 HOH A 121 621 164 HOH HOH . D 4 HOH A 122 622 122 HOH HOH . D 4 HOH A 123 623 45 HOH HOH . D 4 HOH A 124 624 165 HOH HOH . D 4 HOH A 125 625 134 HOH HOH . D 4 HOH A 126 626 155 HOH HOH . D 4 HOH A 127 627 168 HOH HOH . D 4 HOH A 128 628 23 HOH HOH . D 4 HOH A 129 629 77 HOH HOH . D 4 HOH A 130 630 53 HOH HOH . D 4 HOH A 131 631 35 HOH HOH . D 4 HOH A 132 632 98 HOH HOH . D 4 HOH A 133 633 70 HOH HOH . D 4 HOH A 134 634 15 HOH HOH . D 4 HOH A 135 635 180 HOH HOH . D 4 HOH A 136 636 39 HOH HOH . D 4 HOH A 137 637 69 HOH HOH . D 4 HOH A 138 638 181 HOH HOH . D 4 HOH A 139 639 28 HOH HOH . D 4 HOH A 140 640 41 HOH HOH . D 4 HOH A 141 641 162 HOH HOH . D 4 HOH A 142 642 183 HOH HOH . D 4 HOH A 143 643 140 HOH HOH . D 4 HOH A 144 644 32 HOH HOH . D 4 HOH A 145 645 141 HOH HOH . D 4 HOH A 146 646 113 HOH HOH . D 4 HOH A 147 647 179 HOH HOH . D 4 HOH A 148 648 10 HOH HOH . D 4 HOH A 149 649 50 HOH HOH . D 4 HOH A 150 650 188 HOH HOH . D 4 HOH A 151 651 166 HOH HOH . D 4 HOH A 152 652 190 HOH HOH . D 4 HOH A 153 653 127 HOH HOH . D 4 HOH A 154 654 80 HOH HOH . D 4 HOH A 155 655 131 HOH HOH . D 4 HOH A 156 656 65 HOH HOH . D 4 HOH A 157 657 76 HOH HOH . D 4 HOH A 158 658 117 HOH HOH . D 4 HOH A 159 659 148 HOH HOH . D 4 HOH A 160 660 108 HOH HOH . D 4 HOH A 161 661 66 HOH HOH . D 4 HOH A 162 662 73 HOH HOH . D 4 HOH A 163 663 104 HOH HOH . D 4 HOH A 164 664 178 HOH HOH . D 4 HOH A 165 665 111 HOH HOH . D 4 HOH A 166 666 159 HOH HOH . D 4 HOH A 167 667 64 HOH HOH . D 4 HOH A 168 668 170 HOH HOH . D 4 HOH A 169 669 119 HOH HOH . D 4 HOH A 170 670 20 HOH HOH . D 4 HOH A 171 671 121 HOH HOH . D 4 HOH A 172 672 124 HOH HOH . D 4 HOH A 173 673 126 HOH HOH . D 4 HOH A 174 674 157 HOH HOH . D 4 HOH A 175 675 68 HOH HOH . D 4 HOH A 176 676 149 HOH HOH . D 4 HOH A 177 677 128 HOH HOH . D 4 HOH A 178 678 147 HOH HOH . D 4 HOH A 179 679 186 HOH HOH . D 4 HOH A 180 680 156 HOH HOH . D 4 HOH A 181 681 93 HOH HOH . D 4 HOH A 182 682 176 HOH HOH . D 4 HOH A 183 683 82 HOH HOH . D 4 HOH A 184 684 143 HOH HOH . D 4 HOH A 185 685 92 HOH HOH . D 4 HOH A 186 686 194 HOH HOH . D 4 HOH A 187 687 138 HOH HOH . D 4 HOH A 188 688 99 HOH HOH . D 4 HOH A 189 689 110 HOH HOH . D 4 HOH A 190 690 191 HOH HOH . D 4 HOH A 191 691 153 HOH HOH . D 4 HOH A 192 692 130 HOH HOH . D 4 HOH A 193 693 133 HOH HOH . D 4 HOH A 194 694 177 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -12.443 _atom_site.Cartn_y -8.874 _atom_site.Cartn_z -10.893 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 53 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #