data_6VTR # _model_server_result.job_id L7Lj57xQ36wbgwvz7Dr36Q _model_server_result.datetime_utc '2024-10-19 17:34:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vtr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6VTR # _exptl.entry_id 6VTR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VTR _cell.length_a 54.01 _cell.length_b 66.7 _cell.length_c 71.43 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VTR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 328 n n C C2 TRS sing 329 n n C C3 TRS sing 330 n n C N TRS sing 331 n n C1 O1 TRS sing 332 n n C1 H11 TRS sing 333 n n C1 H12 TRS sing 334 n n C2 O2 TRS sing 335 n n C2 H21 TRS sing 336 n n C2 H22 TRS sing 337 n n C3 O3 TRS sing 338 n n C3 H31 TRS sing 339 n n C3 H32 TRS sing 340 n n N HN1 TRS sing 341 n n N HN2 TRS sing 342 n n N HN3 TRS sing 343 n n O1 HO1 TRS sing 344 n n O2 HO2 TRS sing 345 n n O3 HO3 TRS sing 346 n n # _atom_sites.entry_id 6VTR _atom_sites.fract_transf_matrix[1][1] 0.018515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRS A 1 201 1 TRS TRS . D 3 GOL B 1 201 4 GOL GOL . E 4 HOH A 1 301 100 HOH HOH . E 4 HOH A 2 302 48 HOH HOH . E 4 HOH A 3 303 12 HOH HOH . E 4 HOH A 4 304 222 HOH HOH . E 4 HOH A 5 305 7 HOH HOH . E 4 HOH A 6 306 220 HOH HOH . E 4 HOH A 7 307 10 HOH HOH . E 4 HOH A 8 308 3 HOH HOH . E 4 HOH A 9 309 40 HOH HOH . E 4 HOH A 10 310 5 HOH HOH . E 4 HOH A 11 311 134 HOH HOH . E 4 HOH A 12 312 103 HOH HOH . E 4 HOH A 13 313 14 HOH HOH . E 4 HOH A 14 314 121 HOH HOH . E 4 HOH A 15 315 24 HOH HOH . E 4 HOH A 16 316 18 HOH HOH . E 4 HOH A 17 317 11 HOH HOH . E 4 HOH A 18 318 31 HOH HOH . E 4 HOH A 19 319 219 HOH HOH . E 4 HOH A 20 320 140 HOH HOH . E 4 HOH A 21 321 4 HOH HOH . E 4 HOH A 22 322 30 HOH HOH . E 4 HOH A 23 323 16 HOH HOH . E 4 HOH A 24 324 25 HOH HOH . E 4 HOH A 25 325 42 HOH HOH . E 4 HOH A 26 326 163 HOH HOH . E 4 HOH A 27 327 161 HOH HOH . E 4 HOH A 28 328 15 HOH HOH . E 4 HOH A 29 329 164 HOH HOH . E 4 HOH A 30 330 6 HOH HOH . E 4 HOH A 31 331 183 HOH HOH . E 4 HOH A 32 332 20 HOH HOH . E 4 HOH A 33 333 8 HOH HOH . E 4 HOH A 34 334 144 HOH HOH . E 4 HOH A 35 335 13 HOH HOH . E 4 HOH A 36 336 141 HOH HOH . E 4 HOH A 37 337 152 HOH HOH . E 4 HOH A 38 338 57 HOH HOH . E 4 HOH A 39 339 22 HOH HOH . E 4 HOH A 40 340 209 HOH HOH . E 4 HOH A 41 341 165 HOH HOH . E 4 HOH A 42 342 56 HOH HOH . E 4 HOH A 43 343 96 HOH HOH . F 4 HOH B 1 301 23 HOH HOH . F 4 HOH B 2 302 178 HOH HOH . F 4 HOH B 3 303 45 HOH HOH . F 4 HOH B 4 304 54 HOH HOH . F 4 HOH B 5 305 143 HOH HOH . F 4 HOH B 6 306 160 HOH HOH . F 4 HOH B 7 307 195 HOH HOH . F 4 HOH B 8 308 196 HOH HOH . F 4 HOH B 9 309 108 HOH HOH . F 4 HOH B 10 310 117 HOH HOH . F 4 HOH B 11 311 168 HOH HOH . F 4 HOH B 12 312 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 2 9.008 -11.845 -0.166 1 31.74 ? C TRS 201 A 1 HETATM 2 C C1 TRS . . . C 2 10.485 -12.089 -0.45 1 43.57 ? C1 TRS 201 A 1 HETATM 3 C C2 TRS . . . C 2 8.349 -11.193 -1.375 1 44.03 ? C2 TRS 201 A 1 HETATM 4 C C3 TRS . . . C 2 8.831 -10.955 1.058 1 41.9 ? C3 TRS 201 A 1 HETATM 5 N N TRS . . . C 2 8.36 -13.131 0.09 1 35.62 ? N TRS 201 A 1 HETATM 6 O O1 TRS . . . C 2 11.097 -12.773 0.624 1 52.9 ? O1 TRS 201 A 1 HETATM 7 O O2 TRS . . . C 2 8.497 -12.023 -2.506 1 34.84 ? O2 TRS 201 A 1 HETATM 8 O O3 TRS . . . C 2 9.342 -11.597 2.205 1 58.4 ? O3 TRS 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #