data_6VV7
#
_model_server_result.job_id            9tylFHzGnVy5VpwJkV1r2g 
_model_server_result.datetime_utc      '2024-11-27 05:10:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vv7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":203}' 
#
_entry.id    6VV7 
#
_exptl.entry_id    6VV7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              375.42 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-[3-(5-methyl-1H-indol-3-yl)propoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VV7 
_cell.length_a            61.505 
_cell.length_b            72.018 
_cell.length_c            72.044 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VV7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,N 1 1 
B,I,J,K,L,M,O 2 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 40 A HIS 38 1_555 D CO CO . A CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc2 D CO CO . A CO 202 1_555 N O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? 
metalc ? metalc3 D CO CO . A CO 202 1_555 N O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
metalc ? metalc4 D CO CO . A CO 202 1_555 N O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc5 D CO CO . A CO 202 1_555 B NE2 HIS 159 B HIS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
metalc ? metalc6 D CO CO . A CO 202 1_555 O O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc7 B NE2 HIS 40 B HIS 38 1_555 J CO CO . B CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc8 J CO CO . B CO 202 1_555 O O HOH . B HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
#
_chem_comp.formula           'C22 H21 N3 O3' 
_chem_comp.formula_weight    375.42 
_chem_comp.id                RPM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-[3-(5-methyl-1H-indol-3-yl)propoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C03 C04 RPM doub 363 n y 
C03 C02 RPM sing 364 n y 
C04 C05 RPM sing 365 n y 
C01 C02 RPM sing 366 n n 
C02 C28 RPM doub 367 n y 
C05 N06 RPM sing 368 n y 
C05 C27 RPM doub 369 n y 
N06 C07 RPM sing 370 n y 
C28 C27 RPM sing 371 n y 
C27 C08 RPM sing 372 n y 
C07 C08 RPM doub 373 n y 
C08 C09 RPM sing 374 n n 
O16 C15 RPM doub 375 n n 
C15 O17 RPM sing 376 n n 
C15 C14 RPM sing 377 n n 
C09 C10 RPM sing 378 n n 
O12 C11 RPM sing 379 n n 
O12 C13 RPM sing 380 n n 
C10 C11 RPM sing 381 n n 
C14 C13 RPM doub 382 n y 
C14 C18 RPM sing 383 n y 
C13 N20 RPM sing 384 n y 
C22 C23 RPM doub 385 n y 
C22 C21 RPM sing 386 n y 
C18 N19 RPM doub 387 n y 
C23 C24 RPM sing 388 n y 
N20 C21 RPM sing 389 n n 
N20 N19 RPM sing 390 n y 
C21 C26 RPM doub 391 n y 
C24 C25 RPM doub 392 n y 
C26 C25 RPM sing 393 n y 
C10 H1 RPM sing 394 n n 
C10 H2 RPM sing 395 n n 
C22 H3 RPM sing 396 n n 
C24 H4 RPM sing 397 n n 
C26 H5 RPM sing 398 n n 
C28 H6 RPM sing 399 n n 
C01 H7 RPM sing 400 n n 
C01 H8 RPM sing 401 n n 
C01 H9 RPM sing 402 n n 
C03 H10 RPM sing 403 n n 
C04 H11 RPM sing 404 n n 
C07 H12 RPM sing 405 n n 
C09 H13 RPM sing 406 n n 
C09 H14 RPM sing 407 n n 
C11 H15 RPM sing 408 n n 
C11 H16 RPM sing 409 n n 
C18 H17 RPM sing 410 n n 
C23 H18 RPM sing 411 n n 
C25 H19 RPM sing 412 n n 
N06 H20 RPM sing 413 n n 
O17 H21 RPM sing 414 n n 
#
_atom_sites.entry_id                     6VV7 
_atom_sites.fract_transf_matrix[1][1]    0.016259 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013885 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01388 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 201 1 NDP NDP . 
D 3 CO A 1 202 1 CO CO . 
E 4 RPM A 1 203 1 RPM LIG . 
F 5 PO4 A 1 204 1 PO4 PO4 . 
G 5 PO4 A 1 205 2 PO4 PO4 . 
H 5 PO4 A 1 206 5 PO4 PO4 . 
I 2 NDP B 1 201 2 NDP NDP . 
J 3 CO B 1 202 2 CO CO . 
K 4 RPM B 1 203 2 RPM LIG . 
L 5 PO4 B 1 204 4 PO4 PO4 . 
M 6 SO4 B 1 205 1 SO4 SO4 . 
N 7 HOH A 1 301 137 HOH HOH . 
N 7 HOH A 2 302 132 HOH HOH . 
N 7 HOH A 3 303 58 HOH HOH . 
N 7 HOH A 4 304 142 HOH HOH . 
N 7 HOH A 5 305 11 HOH HOH . 
N 7 HOH A 6 306 135 HOH HOH . 
N 7 HOH A 7 307 76 HOH HOH . 
N 7 HOH A 8 308 85 HOH HOH . 
N 7 HOH A 9 309 35 HOH HOH . 
N 7 HOH A 10 310 18 HOH HOH . 
N 7 HOH A 11 311 8 HOH HOH . 
N 7 HOH A 12 312 91 HOH HOH . 
N 7 HOH A 13 313 138 HOH HOH . 
N 7 HOH A 14 314 51 HOH HOH . 
N 7 HOH A 15 315 101 HOH HOH . 
N 7 HOH A 16 316 73 HOH HOH . 
N 7 HOH A 17 317 125 HOH HOH . 
N 7 HOH A 18 318 106 HOH HOH . 
N 7 HOH A 19 319 3 HOH HOH . 
N 7 HOH A 20 320 97 HOH HOH . 
N 7 HOH A 21 321 10 HOH HOH . 
N 7 HOH A 22 322 110 HOH HOH . 
N 7 HOH A 23 323 112 HOH HOH . 
N 7 HOH A 24 324 55 HOH HOH . 
N 7 HOH A 25 325 13 HOH HOH . 
N 7 HOH A 26 326 4 HOH HOH . 
N 7 HOH A 27 327 70 HOH HOH . 
N 7 HOH A 28 328 74 HOH HOH . 
N 7 HOH A 29 329 1 HOH HOH . 
N 7 HOH A 30 330 86 HOH HOH . 
N 7 HOH A 31 331 141 HOH HOH . 
N 7 HOH A 32 332 31 HOH HOH . 
N 7 HOH A 33 333 22 HOH HOH . 
N 7 HOH A 34 334 102 HOH HOH . 
N 7 HOH A 35 335 64 HOH HOH . 
N 7 HOH A 36 336 130 HOH HOH . 
N 7 HOH A 37 337 131 HOH HOH . 
N 7 HOH A 38 338 123 HOH HOH . 
N 7 HOH A 39 339 139 HOH HOH . 
N 7 HOH A 40 340 140 HOH HOH . 
N 7 HOH A 41 341 128 HOH HOH . 
N 7 HOH A 42 342 107 HOH HOH . 
N 7 HOH A 43 343 127 HOH HOH . 
N 7 HOH A 44 344 39 HOH HOH . 
N 7 HOH A 45 345 21 HOH HOH . 
N 7 HOH A 46 346 133 HOH HOH . 
N 7 HOH A 47 347 124 HOH HOH . 
O 7 HOH B 1 301 148 HOH HOH . 
O 7 HOH B 2 302 118 HOH HOH . 
O 7 HOH B 3 303 149 HOH HOH . 
O 7 HOH B 4 304 94 HOH HOH . 
O 7 HOH B 5 305 136 HOH HOH . 
O 7 HOH B 6 306 129 HOH HOH . 
O 7 HOH B 7 307 143 HOH HOH . 
O 7 HOH B 8 308 17 HOH HOH . 
O 7 HOH B 9 309 79 HOH HOH . 
O 7 HOH B 10 310 75 HOH HOH . 
O 7 HOH B 11 311 99 HOH HOH . 
O 7 HOH B 12 312 71 HOH HOH . 
O 7 HOH B 13 313 144 HOH HOH . 
O 7 HOH B 14 314 93 HOH HOH . 
O 7 HOH B 15 315 2 HOH HOH . 
O 7 HOH B 16 316 116 HOH HOH . 
O 7 HOH B 17 317 7 HOH HOH . 
O 7 HOH B 18 318 24 HOH HOH . 
O 7 HOH B 19 319 14 HOH HOH . 
O 7 HOH B 20 320 146 HOH HOH . 
O 7 HOH B 21 321 15 HOH HOH . 
O 7 HOH B 22 322 122 HOH HOH . 
O 7 HOH B 23 323 117 HOH HOH . 
O 7 HOH B 24 324 78 HOH HOH . 
O 7 HOH B 25 325 36 HOH HOH . 
O 7 HOH B 26 326 95 HOH HOH . 
O 7 HOH B 27 327 92 HOH HOH . 
O 7 HOH B 28 328 151 HOH HOH . 
O 7 HOH B 29 329 20 HOH HOH . 
O 7 HOH B 30 330 59 HOH HOH . 
O 7 HOH B 31 331 90 HOH HOH . 
O 7 HOH B 32 332 6 HOH HOH . 
O 7 HOH B 33 333 84 HOH HOH . 
O 7 HOH B 34 334 147 HOH HOH . 
O 7 HOH B 35 335 150 HOH HOH . 
O 7 HOH B 36 336 145 HOH HOH . 
O 7 HOH B 37 337 38 HOH HOH . 
O 7 HOH B 38 338 134 HOH HOH . 
O 7 HOH B 39 339 126 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 RPM . . . K 4 34.769 -10.192 8.675 1 25.66 ? C10 RPM 203 B 1 
HETATM 2 C C13 RPM . . . K 4 33.879 -10.458 5.137 1 24.72 ? C13 RPM 203 B 1 
HETATM 3 C C15 RPM . . . K 4 31.498 -9.464 4.598 1 22.8 ? C15 RPM 203 B 1 
HETATM 4 C C21 RPM . . . K 4 35.869 -11.77 4.918 1 25.85 ? C21 RPM 203 B 1 
HETATM 5 C C22 RPM . . . K 4 36.85 -10.942 5.43 1 25.52 ? C22 RPM 203 B 1 
HETATM 6 C C24 RPM . . . K 4 38.294 -12.85 5.751 1 29.4 ? C24 RPM 203 B 1 
HETATM 7 C C26 RPM . . . K 4 36.106 -13.132 4.837 1 30.55 ? C26 RPM 203 B 1 
HETATM 8 C C28 RPM . . . K 4 35.829 -8.353 11.222 1 21.73 ? C28 RPM 203 B 1 
HETATM 9 C C01 RPM . . . K 4 34.999 -7.637 13.505 1 25.21 ? C01 RPM 203 B 1 
HETATM 10 C C02 RPM . . . K 4 35.74 -7.371 12.205 1 23.32 ? C02 RPM 203 B 1 
HETATM 11 C C03 RPM . . . K 4 36.321 -6.136 11.975 1 21.82 ? C03 RPM 203 B 1 
HETATM 12 C C04 RPM . . . K 4 36.982 -5.919 10.778 1 21.32 ? C04 RPM 203 B 1 
HETATM 13 C C05 RPM . . . K 4 37.087 -6.897 9.792 1 18.22 ? C05 RPM 203 B 1 
HETATM 14 C C07 RPM . . . K 4 37.512 -8.06 7.99 1 23.53 ? C07 RPM 203 B 1 
HETATM 15 C C08 RPM . . . K 4 36.784 -8.854 8.868 1 19.66 ? C08 RPM 203 B 1 
HETATM 16 C C09 RPM . . . K 4 36.3 -10.279 8.664 1 25.96 ? C09 RPM 203 B 1 
HETATM 17 C C11 RPM . . . K 4 34.048 -10.706 7.433 1 28.35 ? C11 RPM 203 B 1 
HETATM 18 C C14 RPM . . . K 4 32.734 -10.332 4.346 1 24.86 ? C14 RPM 203 B 1 
HETATM 19 C C18 RPM . . . K 4 32.914 -11.156 3.248 1 31.24 ? C18 RPM 203 B 1 
HETATM 20 C C23 RPM . . . K 4 38.056 -11.484 5.843 1 26.5 ? C23 RPM 203 B 1 
HETATM 21 C C25 RPM . . . K 4 37.314 -13.676 5.246 1 31.61 ? C25 RPM 203 B 1 
HETATM 22 C C27 RPM . . . K 4 36.508 -8.105 10.013 1 18.66 ? C27 RPM 203 B 1 
HETATM 23 N N06 RPM . . . K 4 37.678 -6.894 8.586 1 21.67 ? N06 RPM 203 B 1 
HETATM 24 N N19 RPM . . . K 4 34.084 -11.753 3.369 1 26.8 ? N19 RPM 203 B 1 
HETATM 25 N N20 RPM . . . K 4 34.684 -11.327 4.519 1 24.66 ? N20 RPM 203 B 1 
HETATM 26 O O12 RPM . . . K 4 34.13 -9.807 6.36 1 27.39 ? O12 RPM 203 B 1 
HETATM 27 O O16 RPM . . . K 4 31.503 -8.625 5.541 1 21.51 ? O16 RPM 203 B 1 
HETATM 28 O O17 RPM . . . K 4 30.48 -9.588 3.857 1 23.87 -1 O17 RPM 203 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           28 
#