data_6VV7 # _model_server_result.job_id B99xdK91725ekuV-ZisWdg _model_server_result.datetime_utc '2024-11-14 01:35:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":203}' # _entry.id 6VV7 # _exptl.entry_id 6VV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.42 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[3-(5-methyl-1H-indol-3-yl)propoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VV7 _cell.length_a 61.505 _cell.length_b 72.018 _cell.length_c 72.044 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 40 A HIS 38 1_555 D CO CO . A CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc2 D CO CO . A CO 202 1_555 N O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc3 D CO CO . A CO 202 1_555 N O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc4 D CO CO . A CO 202 1_555 N O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc5 D CO CO . A CO 202 1_555 B NE2 HIS 159 B HIS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc6 D CO CO . A CO 202 1_555 O O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc7 B NE2 HIS 40 B HIS 38 1_555 J CO CO . B CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc8 J CO CO . B CO 202 1_555 O O HOH . B HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? # _chem_comp.formula 'C22 H21 N3 O3' _chem_comp.formula_weight 375.42 _chem_comp.id RPM _chem_comp.mon_nstd_flag . _chem_comp.name '5-[3-(5-methyl-1H-indol-3-yl)propoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C03 C04 RPM doub 363 n y C03 C02 RPM sing 364 n y C04 C05 RPM sing 365 n y C01 C02 RPM sing 366 n n C02 C28 RPM doub 367 n y C05 N06 RPM sing 368 n y C05 C27 RPM doub 369 n y N06 C07 RPM sing 370 n y C28 C27 RPM sing 371 n y C27 C08 RPM sing 372 n y C07 C08 RPM doub 373 n y C08 C09 RPM sing 374 n n O16 C15 RPM doub 375 n n C15 O17 RPM sing 376 n n C15 C14 RPM sing 377 n n C09 C10 RPM sing 378 n n O12 C11 RPM sing 379 n n O12 C13 RPM sing 380 n n C10 C11 RPM sing 381 n n C14 C13 RPM doub 382 n y C14 C18 RPM sing 383 n y C13 N20 RPM sing 384 n y C22 C23 RPM doub 385 n y C22 C21 RPM sing 386 n y C18 N19 RPM doub 387 n y C23 C24 RPM sing 388 n y N20 C21 RPM sing 389 n n N20 N19 RPM sing 390 n y C21 C26 RPM doub 391 n y C24 C25 RPM doub 392 n y C26 C25 RPM sing 393 n y C10 H1 RPM sing 394 n n C10 H2 RPM sing 395 n n C22 H3 RPM sing 396 n n C24 H4 RPM sing 397 n n C26 H5 RPM sing 398 n n C28 H6 RPM sing 399 n n C01 H7 RPM sing 400 n n C01 H8 RPM sing 401 n n C01 H9 RPM sing 402 n n C03 H10 RPM sing 403 n n C04 H11 RPM sing 404 n n C07 H12 RPM sing 405 n n C09 H13 RPM sing 406 n n C09 H14 RPM sing 407 n n C11 H15 RPM sing 408 n n C11 H16 RPM sing 409 n n C18 H17 RPM sing 410 n n C23 H18 RPM sing 411 n n C25 H19 RPM sing 412 n n N06 H20 RPM sing 413 n n O17 H21 RPM sing 414 n n # _atom_sites.entry_id 6VV7 _atom_sites.fract_transf_matrix[1][1] 0.016259 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013885 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 201 1 NDP NDP . D 3 CO A 1 202 1 CO CO . E 4 RPM A 1 203 1 RPM LIG . F 5 PO4 A 1 204 1 PO4 PO4 . G 5 PO4 A 1 205 2 PO4 PO4 . H 5 PO4 A 1 206 5 PO4 PO4 . I 2 NDP B 1 201 2 NDP NDP . J 3 CO B 1 202 2 CO CO . K 4 RPM B 1 203 2 RPM LIG . L 5 PO4 B 1 204 4 PO4 PO4 . M 6 SO4 B 1 205 1 SO4 SO4 . N 7 HOH A 1 301 137 HOH HOH . N 7 HOH A 2 302 132 HOH HOH . N 7 HOH A 3 303 58 HOH HOH . N 7 HOH A 4 304 142 HOH HOH . N 7 HOH A 5 305 11 HOH HOH . N 7 HOH A 6 306 135 HOH HOH . N 7 HOH A 7 307 76 HOH HOH . N 7 HOH A 8 308 85 HOH HOH . N 7 HOH A 9 309 35 HOH HOH . N 7 HOH A 10 310 18 HOH HOH . N 7 HOH A 11 311 8 HOH HOH . N 7 HOH A 12 312 91 HOH HOH . N 7 HOH A 13 313 138 HOH HOH . N 7 HOH A 14 314 51 HOH HOH . N 7 HOH A 15 315 101 HOH HOH . N 7 HOH A 16 316 73 HOH HOH . N 7 HOH A 17 317 125 HOH HOH . N 7 HOH A 18 318 106 HOH HOH . N 7 HOH A 19 319 3 HOH HOH . N 7 HOH A 20 320 97 HOH HOH . N 7 HOH A 21 321 10 HOH HOH . N 7 HOH A 22 322 110 HOH HOH . N 7 HOH A 23 323 112 HOH HOH . N 7 HOH A 24 324 55 HOH HOH . N 7 HOH A 25 325 13 HOH HOH . N 7 HOH A 26 326 4 HOH HOH . N 7 HOH A 27 327 70 HOH HOH . N 7 HOH A 28 328 74 HOH HOH . N 7 HOH A 29 329 1 HOH HOH . N 7 HOH A 30 330 86 HOH HOH . N 7 HOH A 31 331 141 HOH HOH . N 7 HOH A 32 332 31 HOH HOH . N 7 HOH A 33 333 22 HOH HOH . N 7 HOH A 34 334 102 HOH HOH . N 7 HOH A 35 335 64 HOH HOH . N 7 HOH A 36 336 130 HOH HOH . N 7 HOH A 37 337 131 HOH HOH . N 7 HOH A 38 338 123 HOH HOH . N 7 HOH A 39 339 139 HOH HOH . N 7 HOH A 40 340 140 HOH HOH . N 7 HOH A 41 341 128 HOH HOH . N 7 HOH A 42 342 107 HOH HOH . N 7 HOH A 43 343 127 HOH HOH . N 7 HOH A 44 344 39 HOH HOH . N 7 HOH A 45 345 21 HOH HOH . N 7 HOH A 46 346 133 HOH HOH . N 7 HOH A 47 347 124 HOH HOH . O 7 HOH B 1 301 148 HOH HOH . O 7 HOH B 2 302 118 HOH HOH . O 7 HOH B 3 303 149 HOH HOH . O 7 HOH B 4 304 94 HOH HOH . O 7 HOH B 5 305 136 HOH HOH . O 7 HOH B 6 306 129 HOH HOH . O 7 HOH B 7 307 143 HOH HOH . O 7 HOH B 8 308 17 HOH HOH . O 7 HOH B 9 309 79 HOH HOH . O 7 HOH B 10 310 75 HOH HOH . O 7 HOH B 11 311 99 HOH HOH . O 7 HOH B 12 312 71 HOH HOH . O 7 HOH B 13 313 144 HOH HOH . O 7 HOH B 14 314 93 HOH HOH . O 7 HOH B 15 315 2 HOH HOH . O 7 HOH B 16 316 116 HOH HOH . O 7 HOH B 17 317 7 HOH HOH . O 7 HOH B 18 318 24 HOH HOH . O 7 HOH B 19 319 14 HOH HOH . O 7 HOH B 20 320 146 HOH HOH . O 7 HOH B 21 321 15 HOH HOH . O 7 HOH B 22 322 122 HOH HOH . O 7 HOH B 23 323 117 HOH HOH . O 7 HOH B 24 324 78 HOH HOH . O 7 HOH B 25 325 36 HOH HOH . O 7 HOH B 26 326 95 HOH HOH . O 7 HOH B 27 327 92 HOH HOH . O 7 HOH B 28 328 151 HOH HOH . O 7 HOH B 29 329 20 HOH HOH . O 7 HOH B 30 330 59 HOH HOH . O 7 HOH B 31 331 90 HOH HOH . O 7 HOH B 32 332 6 HOH HOH . O 7 HOH B 33 333 84 HOH HOH . O 7 HOH B 34 334 147 HOH HOH . O 7 HOH B 35 335 150 HOH HOH . O 7 HOH B 36 336 145 HOH HOH . O 7 HOH B 37 337 38 HOH HOH . O 7 HOH B 38 338 134 HOH HOH . O 7 HOH B 39 339 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 RPM . . . K 4 34.769 -10.192 8.675 1 25.66 ? C10 RPM 203 B 1 HETATM 2 C C13 RPM . . . K 4 33.879 -10.458 5.137 1 24.72 ? C13 RPM 203 B 1 HETATM 3 C C15 RPM . . . K 4 31.498 -9.464 4.598 1 22.8 ? C15 RPM 203 B 1 HETATM 4 C C21 RPM . . . K 4 35.869 -11.77 4.918 1 25.85 ? C21 RPM 203 B 1 HETATM 5 C C22 RPM . . . K 4 36.85 -10.942 5.43 1 25.52 ? C22 RPM 203 B 1 HETATM 6 C C24 RPM . . . K 4 38.294 -12.85 5.751 1 29.4 ? C24 RPM 203 B 1 HETATM 7 C C26 RPM . . . K 4 36.106 -13.132 4.837 1 30.55 ? C26 RPM 203 B 1 HETATM 8 C C28 RPM . . . K 4 35.829 -8.353 11.222 1 21.73 ? C28 RPM 203 B 1 HETATM 9 C C01 RPM . . . K 4 34.999 -7.637 13.505 1 25.21 ? C01 RPM 203 B 1 HETATM 10 C C02 RPM . . . K 4 35.74 -7.371 12.205 1 23.32 ? C02 RPM 203 B 1 HETATM 11 C C03 RPM . . . K 4 36.321 -6.136 11.975 1 21.82 ? C03 RPM 203 B 1 HETATM 12 C C04 RPM . . . K 4 36.982 -5.919 10.778 1 21.32 ? C04 RPM 203 B 1 HETATM 13 C C05 RPM . . . K 4 37.087 -6.897 9.792 1 18.22 ? C05 RPM 203 B 1 HETATM 14 C C07 RPM . . . K 4 37.512 -8.06 7.99 1 23.53 ? C07 RPM 203 B 1 HETATM 15 C C08 RPM . . . K 4 36.784 -8.854 8.868 1 19.66 ? C08 RPM 203 B 1 HETATM 16 C C09 RPM . . . K 4 36.3 -10.279 8.664 1 25.96 ? C09 RPM 203 B 1 HETATM 17 C C11 RPM . . . K 4 34.048 -10.706 7.433 1 28.35 ? C11 RPM 203 B 1 HETATM 18 C C14 RPM . . . K 4 32.734 -10.332 4.346 1 24.86 ? C14 RPM 203 B 1 HETATM 19 C C18 RPM . . . K 4 32.914 -11.156 3.248 1 31.24 ? C18 RPM 203 B 1 HETATM 20 C C23 RPM . . . K 4 38.056 -11.484 5.843 1 26.5 ? C23 RPM 203 B 1 HETATM 21 C C25 RPM . . . K 4 37.314 -13.676 5.246 1 31.61 ? C25 RPM 203 B 1 HETATM 22 C C27 RPM . . . K 4 36.508 -8.105 10.013 1 18.66 ? C27 RPM 203 B 1 HETATM 23 N N06 RPM . . . K 4 37.678 -6.894 8.586 1 21.67 ? N06 RPM 203 B 1 HETATM 24 N N19 RPM . . . K 4 34.084 -11.753 3.369 1 26.8 ? N19 RPM 203 B 1 HETATM 25 N N20 RPM . . . K 4 34.684 -11.327 4.519 1 24.66 ? N20 RPM 203 B 1 HETATM 26 O O12 RPM . . . K 4 34.13 -9.807 6.36 1 27.39 ? O12 RPM 203 B 1 HETATM 27 O O16 RPM . . . K 4 31.503 -8.625 5.541 1 21.51 ? O16 RPM 203 B 1 HETATM 28 O O17 RPM . . . K 4 30.48 -9.588 3.857 1 23.87 -1 O17 RPM 203 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #