data_6VV9 # _model_server_result.job_id VMWx7qNXnF122FeGY81fSw _model_server_result.datetime_utc '2025-06-20 22:29:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":304}' # _entry.id 6VV9 # _exptl.entry_id 6VV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.42 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[4-(1H-indol-3-yl)butoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VV9 _cell.length_a 61.18 _cell.length_b 70.873 _cell.length_c 72.081 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,N 1 1 B,G,H,I,J,K,L,M,O 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 40 A HIS 38 1_555 G CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 N O HOH . A HOH 312 1_555 G CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc3 N O HOH . A HOH 334 1_555 I CO CO . B CO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc4 B NE2 HIS 40 B HIS 38 1_555 I CO CO . B CO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc5 B NE2 HIS 159 B HIS 157 1_555 G CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? metalc ? metalc6 G CO CO . B CO 301 1_555 O O HOH . B HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc7 G CO CO . B CO 301 1_555 O O HOH . B HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc8 I CO CO . B CO 303 1_555 O O HOH . B HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc9 I CO CO . B CO 303 1_555 O O HOH . B HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula 'C22 H21 N3 O3' _chem_comp.formula_weight 375.42 _chem_comp.id RQ1 _chem_comp.mon_nstd_flag . _chem_comp.name '5-[4-(1H-indol-3-yl)butoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N22 C21 RQ1 sing 363 n y N22 C23 RQ1 sing 364 n y C21 C20 RQ1 doub 365 n y C23 C24 RQ1 doub 366 n y C23 C28 RQ1 sing 367 n y C24 C25 RQ1 sing 368 n y C20 C28 RQ1 sing 369 n y C20 C19 RQ1 sing 370 n n C28 C27 RQ1 doub 371 n y C19 C18 RQ1 sing 372 n n C18 C17 RQ1 sing 373 n n C17 C16 RQ1 sing 374 n n C25 C26 RQ1 doub 375 n y O03 C02 RQ1 doub 376 n n C27 C26 RQ1 sing 377 n y C16 O15 RQ1 sing 378 n n C02 O01 RQ1 sing 379 n n C02 C04 RQ1 sing 380 n n O15 C14 RQ1 sing 381 n n C04 C14 RQ1 doub 382 n y C04 C05 RQ1 sing 383 n y C14 N07 RQ1 sing 384 n y C09 C10 RQ1 doub 385 n y C09 C08 RQ1 sing 386 n y C05 N06 RQ1 doub 387 n y N07 N06 RQ1 sing 388 n y N07 C08 RQ1 sing 389 n n C10 C11 RQ1 sing 390 n y C08 C13 RQ1 doub 391 n y C11 C12 RQ1 doub 392 n y C13 C12 RQ1 sing 393 n y C10 H1 RQ1 sing 394 n n C13 H2 RQ1 sing 395 n n C17 H3 RQ1 sing 396 n n C17 H4 RQ1 sing 397 n n C21 H5 RQ1 sing 398 n n C24 H6 RQ1 sing 399 n n C26 H7 RQ1 sing 400 n n C05 H8 RQ1 sing 401 n n C09 H9 RQ1 sing 402 n n C11 H10 RQ1 sing 403 n n C12 H11 RQ1 sing 404 n n C16 H12 RQ1 sing 405 n n C16 H13 RQ1 sing 406 n n C18 H14 RQ1 sing 407 n n C18 H15 RQ1 sing 408 n n C19 H16 RQ1 sing 409 n n C19 H17 RQ1 sing 410 n n C25 H18 RQ1 sing 411 n n C27 H19 RQ1 sing 412 n n N22 H20 RQ1 sing 413 n n O01 H21 RQ1 sing 414 n n # _atom_sites.entry_id 6VV9 _atom_sites.fract_transf_matrix[1][1] 0.016345 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01411 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 201 201 NDP NDP . D 3 RQ1 A 1 202 401 RQ1 LIG . E 4 PO4 A 1 203 2 PO4 PO4 . F 4 PO4 A 1 204 4 PO4 PO4 . G 5 CO B 1 301 301 CO CO . H 2 NDP B 1 302 201 NDP NDP . I 5 CO B 1 303 301 CO CO . J 3 RQ1 B 1 304 401 RQ1 LIG . K 4 PO4 B 1 305 1 PO4 PO4 . L 4 PO4 B 1 306 3 PO4 PO4 . M 4 PO4 B 1 307 5 PO4 PO4 . N 6 HOH A 1 301 57 HOH HOH . N 6 HOH A 2 302 44 HOH HOH . N 6 HOH A 3 303 79 HOH HOH . N 6 HOH A 4 304 64 HOH HOH . N 6 HOH A 5 305 54 HOH HOH . N 6 HOH A 6 306 76 HOH HOH . N 6 HOH A 7 307 87 HOH HOH . N 6 HOH A 8 308 78 HOH HOH . N 6 HOH A 9 309 69 HOH HOH . N 6 HOH A 10 310 77 HOH HOH . N 6 HOH A 11 311 55 HOH HOH . N 6 HOH A 12 312 74 HOH HOH . N 6 HOH A 13 313 53 HOH HOH . N 6 HOH A 14 314 10 HOH HOH . N 6 HOH A 15 315 61 HOH HOH . N 6 HOH A 16 316 12 HOH HOH . N 6 HOH A 17 317 28 HOH HOH . N 6 HOH A 18 318 35 HOH HOH . N 6 HOH A 19 319 4 HOH HOH . N 6 HOH A 20 320 8 HOH HOH . N 6 HOH A 21 321 86 HOH HOH . N 6 HOH A 22 322 41 HOH HOH . N 6 HOH A 23 323 14 HOH HOH . N 6 HOH A 24 324 58 HOH HOH . N 6 HOH A 25 325 85 HOH HOH . N 6 HOH A 26 326 45 HOH HOH . N 6 HOH A 27 327 62 HOH HOH . N 6 HOH A 28 328 38 HOH HOH . N 6 HOH A 29 329 63 HOH HOH . N 6 HOH A 30 330 21 HOH HOH . N 6 HOH A 31 331 3 HOH HOH . N 6 HOH A 32 332 6 HOH HOH . N 6 HOH A 33 333 1 HOH HOH . N 6 HOH A 34 334 2 HOH HOH . N 6 HOH A 35 335 29 HOH HOH . N 6 HOH A 36 336 56 HOH HOH . N 6 HOH A 37 337 43 HOH HOH . N 6 HOH A 38 338 36 HOH HOH . N 6 HOH A 39 339 66 HOH HOH . N 6 HOH A 40 340 46 HOH HOH . N 6 HOH A 41 341 37 HOH HOH . N 6 HOH A 42 342 67 HOH HOH . N 6 HOH A 43 343 65 HOH HOH . N 6 HOH A 44 344 59 HOH HOH . N 6 HOH A 45 345 30 HOH HOH . N 6 HOH A 46 346 39 HOH HOH . N 6 HOH A 47 347 81 HOH HOH . N 6 HOH A 48 348 71 HOH HOH . N 6 HOH A 49 349 72 HOH HOH . N 6 HOH A 50 350 52 HOH HOH . N 6 HOH A 51 351 68 HOH HOH . O 6 HOH B 1 401 82 HOH HOH . O 6 HOH B 2 402 13 HOH HOH . O 6 HOH B 3 403 83 HOH HOH . O 6 HOH B 4 404 40 HOH HOH . O 6 HOH B 5 405 75 HOH HOH . O 6 HOH B 6 406 60 HOH HOH . O 6 HOH B 7 407 42 HOH HOH . O 6 HOH B 8 408 50 HOH HOH . O 6 HOH B 9 409 5 HOH HOH . O 6 HOH B 10 410 23 HOH HOH . O 6 HOH B 11 411 70 HOH HOH . O 6 HOH B 12 412 16 HOH HOH . O 6 HOH B 13 413 51 HOH HOH . O 6 HOH B 14 414 32 HOH HOH . O 6 HOH B 15 415 19 HOH HOH . O 6 HOH B 16 416 11 HOH HOH . O 6 HOH B 17 417 15 HOH HOH . O 6 HOH B 18 418 26 HOH HOH . O 6 HOH B 19 419 27 HOH HOH . O 6 HOH B 20 420 20 HOH HOH . O 6 HOH B 21 421 22 HOH HOH . O 6 HOH B 22 422 34 HOH HOH . O 6 HOH B 23 423 9 HOH HOH . O 6 HOH B 24 424 18 HOH HOH . O 6 HOH B 25 425 25 HOH HOH . O 6 HOH B 26 426 24 HOH HOH . O 6 HOH B 27 427 48 HOH HOH . O 6 HOH B 28 428 7 HOH HOH . O 6 HOH B 29 429 31 HOH HOH . O 6 HOH B 30 430 17 HOH HOH . O 6 HOH B 31 431 49 HOH HOH . O 6 HOH B 32 432 33 HOH HOH . O 6 HOH B 33 433 80 HOH HOH . O 6 HOH B 34 434 47 HOH HOH . O 6 HOH B 35 435 84 HOH HOH . O 6 HOH B 36 436 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 RQ1 . . . J 3 36.004 -15.253 6.89 0.94 108.69 ? C10 RQ1 304 B 1 HETATM 2 C C13 RQ1 . . . J 3 36.201 -13.214 5.048 0.94 107.8 ? C13 RQ1 304 B 1 HETATM 3 C C17 RQ1 . . . J 3 34.711 -9.939 9.327 0.94 101.86 ? C17 RQ1 304 B 1 HETATM 4 C C20 RQ1 . . . J 3 36.444 -8.5 11.392 0.94 97.16 ? C20 RQ1 304 B 1 HETATM 5 C C21 RQ1 . . . J 3 36.26 -7.498 12.337 0.94 96.25 ? C21 RQ1 304 B 1 HETATM 6 C C24 RQ1 . . . J 3 37.702 -5.668 9.64 0.94 97.03 ? C24 RQ1 304 B 1 HETATM 7 C C26 RQ1 . . . J 3 37.981 -7.483 8.095 0.94 96.27 ? C26 RQ1 304 B 1 HETATM 8 C C28 RQ1 . . . J 3 37.026 -7.878 10.278 0.94 96.48 ? C28 RQ1 304 B 1 HETATM 9 C C02 RQ1 . . . J 3 31.851 -9.58 5.442 0.94 103.21 ? C02 RQ1 304 B 1 HETATM 10 C C04 RQ1 . . . J 3 32.632 -10.877 5.346 0.94 103.98 ? C04 RQ1 304 B 1 HETATM 11 C C05 RQ1 . . . J 3 32.241 -11.891 4.5 0.94 104.28 ? C05 RQ1 304 B 1 HETATM 12 C C08 RQ1 . . . J 3 35.046 -13.347 5.798 0.94 107.95 ? C08 RQ1 304 B 1 HETATM 13 C C09 RQ1 . . . J 3 34.937 -14.386 6.708 0.94 107.5 ? C09 RQ1 304 B 1 HETATM 14 C C11 RQ1 . . . J 3 37.169 -15.105 6.156 0.94 109.23 ? C11 RQ1 304 B 1 HETATM 15 C C12 RQ1 . . . J 3 37.262 -14.081 5.232 0.94 109.88 ? C12 RQ1 304 B 1 HETATM 16 C C14 RQ1 . . . J 3 33.802 -11.278 5.994 0.94 103.17 ? C14 RQ1 304 B 1 HETATM 17 C C16 RQ1 . . . J 3 34.128 -10.872 8.259 0.94 101.63 ? C16 RQ1 304 B 1 HETATM 18 C C18 RQ1 . . . J 3 34.896 -10.507 10.744 0.94 100.89 ? C18 RQ1 304 B 1 HETATM 19 C C19 RQ1 . . . J 3 36.114 -9.991 11.529 0.94 98.92 ? C19 RQ1 304 B 1 HETATM 20 C C23 RQ1 . . . J 3 37.151 -6.546 10.585 0.94 96.42 ? C23 RQ1 304 B 1 HETATM 21 C C25 RQ1 . . . J 3 38.115 -6.139 8.403 0.94 96.81 ? C25 RQ1 304 B 1 HETATM 22 C C27 RQ1 . . . J 3 37.448 -8.348 9.029 0.94 96.1 ? C27 RQ1 304 B 1 HETATM 23 N N06 RQ1 . . . J 3 33.109 -12.861 4.629 0.94 105.42 ? N06 RQ1 304 B 1 HETATM 24 N N07 RQ1 . . . J 3 34.056 -12.51 5.544 0.94 105.03 ? N07 RQ1 304 B 1 HETATM 25 N N22 RQ1 . . . J 3 36.684 -6.35 11.827 0.94 95.66 ? N22 RQ1 304 B 1 HETATM 26 O O01 RQ1 . . . J 3 32.019 -8.775 6.384 0.94 102.99 ? O01 RQ1 304 B 1 HETATM 27 O O03 RQ1 . . . J 3 31.029 -9.322 4.529 0.94 103.45 -1 O03 RQ1 304 B 1 HETATM 28 O O15 RQ1 . . . J 3 34.523 -10.533 6.953 0.94 100.38 ? O15 RQ1 304 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #