data_6VVQ # _model_server_result.job_id isu2NTj0HCaBElxdHrjZ7A _model_server_result.datetime_utc '2025-02-05 06:44:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6VVQ # _exptl.entry_id 6VVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.133 _cell.angle_gamma 90 _cell.entry_id 6VVQ _cell.length_a 65.082 _cell.length_b 70.984 _cell.length_c 127.224 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 B,G 2 1 C,E 3 1 D 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 237 n n C1 O2 MYR sing 238 n n C1 C2 MYR sing 239 n n O2 HO2 MYR sing 240 n n C2 C3 MYR sing 241 n n C2 H21 MYR sing 242 n n C2 H22 MYR sing 243 n n C3 C4 MYR sing 244 n n C3 H31 MYR sing 245 n n C3 H32 MYR sing 246 n n C4 C5 MYR sing 247 n n C4 H41 MYR sing 248 n n C4 H42 MYR sing 249 n n C5 C6 MYR sing 250 n n C5 H51 MYR sing 251 n n C5 H52 MYR sing 252 n n C6 C7 MYR sing 253 n n C6 H61 MYR sing 254 n n C6 H62 MYR sing 255 n n C7 C8 MYR sing 256 n n C7 H71 MYR sing 257 n n C7 H72 MYR sing 258 n n C8 C9 MYR sing 259 n n C8 H81 MYR sing 260 n n C8 H82 MYR sing 261 n n C9 C10 MYR sing 262 n n C9 H91 MYR sing 263 n n C9 H92 MYR sing 264 n n C10 C11 MYR sing 265 n n C10 H101 MYR sing 266 n n C10 H102 MYR sing 267 n n C11 C12 MYR sing 268 n n C11 H111 MYR sing 269 n n C11 H112 MYR sing 270 n n C12 C13 MYR sing 271 n n C12 H121 MYR sing 272 n n C12 H122 MYR sing 273 n n C13 C14 MYR sing 274 n n C13 H131 MYR sing 275 n n C13 H132 MYR sing 276 n n C14 H141 MYR sing 277 n n C14 H142 MYR sing 278 n n C14 H143 MYR sing 279 n n # _atom_sites.entry_id 6VVQ _atom_sites.fract_transf_matrix[1][1] 0.015365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001651 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MYR C 1 601 601 MYR MYR . F 3 HOH A 1 601 9 HOH HOH . F 3 HOH A 2 602 4 HOH HOH . F 3 HOH A 3 603 3 HOH HOH . F 3 HOH A 4 604 2 HOH HOH . G 3 HOH B 1 601 8 HOH HOH . G 3 HOH B 2 602 1 HOH HOH . G 3 HOH B 3 603 5 HOH HOH . G 3 HOH B 4 604 7 HOH HOH . G 3 HOH B 5 605 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . E 2 -34.113 3.139 -52.643 1 101.28 ? C1 MYR 601 C 1 HETATM 2 O O1 MYR . . . E 2 -34.324 3.735 -53.721 1 114.82 ? O1 MYR 601 C 1 HETATM 3 O O2 MYR . . . E 2 -32.958 3.135 -52.162 1 96.99 ? O2 MYR 601 C 1 HETATM 4 C C2 MYR . . . E 2 -35.239 2.431 -51.928 1 90.74 ? C2 MYR 601 C 1 HETATM 5 C C3 MYR . . . E 2 -36.142 1.721 -52.935 1 100.01 ? C3 MYR 601 C 1 HETATM 6 C C4 MYR . . . E 2 -35.386 0.694 -53.775 1 101.66 ? C4 MYR 601 C 1 HETATM 7 C C5 MYR . . . E 2 -35.906 -0.728 -53.586 1 111.02 ? C5 MYR 601 C 1 HETATM 8 C C6 MYR . . . E 2 -34.988 -1.535 -52.675 1 104.01 ? C6 MYR 601 C 1 HETATM 9 C C7 MYR . . . E 2 -34.986 -0.995 -51.249 1 100.07 ? C7 MYR 601 C 1 HETATM 10 C C8 MYR . . . E 2 -35.098 -2.142 -50.252 1 88.27 ? C8 MYR 601 C 1 HETATM 11 C C9 MYR . . . E 2 -34.791 -1.689 -48.829 1 72.39 ? C9 MYR 601 C 1 HETATM 12 C C10 MYR . . . E 2 -33.305 -1.394 -48.64 1 68.67 ? C10 MYR 601 C 1 HETATM 13 C C11 MYR . . . E 2 -32.782 -2.01 -47.346 1 81.08 ? C11 MYR 601 C 1 HETATM 14 C C12 MYR . . . E 2 -31.822 -1.091 -46.595 1 72.48 ? C12 MYR 601 C 1 HETATM 15 C C13 MYR . . . E 2 -30.519 -0.882 -47.357 1 69.9 ? C13 MYR 601 C 1 HETATM 16 C C14 MYR . . . E 2 -29.382 -0.532 -46.402 1 66.34 ? C14 MYR 601 C 1 HETATM 17 H H21 MYR . . . E 2 -35.822 3.153 -51.357 1 109.07 ? H21 MYR 601 C 1 HETATM 18 H H22 MYR . . . E 2 -34.828 1.703 -51.228 1 109.07 ? H22 MYR 601 C 1 HETATM 19 H H31 MYR . . . E 2 -36.948 1.22 -52.399 1 120.2 ? H31 MYR 601 C 1 HETATM 20 H H32 MYR . . . E 2 -36.59 2.463 -53.596 1 120.2 ? H32 MYR 601 C 1 HETATM 21 H H41 MYR . . . E 2 -35.471 0.966 -54.827 1 122.18 ? H41 MYR 601 C 1 HETATM 22 H H42 MYR . . . E 2 -34.331 0.724 -53.505 1 122.18 ? H42 MYR 601 C 1 HETATM 23 H H51 MYR . . . E 2 -36.906 -0.694 -53.154 1 133.4 ? H51 MYR 601 C 1 HETATM 24 H H52 MYR . . . E 2 -35.977 -1.22 -54.556 1 133.4 ? H52 MYR 601 C 1 HETATM 25 H H61 MYR . . . E 2 -35.315 -2.575 -52.665 1 125 ? H61 MYR 601 C 1 HETATM 26 H H62 MYR . . . E 2 -33.973 -1.506 -53.071 1 125 ? H62 MYR 601 C 1 HETATM 27 H H71 MYR . . . E 2 -34.066 -0.44 -51.068 1 120.27 ? H71 MYR 601 C 1 HETATM 28 H H72 MYR . . . E 2 -35.823 -0.309 -51.115 1 120.27 ? H72 MYR 601 C 1 HETATM 29 H H81 MYR . . . E 2 -36.107 -2.553 -50.288 1 106.1 ? H81 MYR 601 C 1 HETATM 30 H H82 MYR . . . E 2 -34.403 -2.933 -50.535 1 106.1 ? H82 MYR 601 C 1 HETATM 31 H H91 MYR . . . E 2 -35.368 -0.792 -48.604 1 87.05 ? H91 MYR 601 C 1 HETATM 32 H H92 MYR . . . E 2 -35.095 -2.467 -48.13 1 87.05 ? H92 MYR 601 C 1 HETATM 33 H H101 MYR . . . E 2 -33.149 -0.315 -48.618 1 82.59 ? H101 MYR 601 C 1 HETATM 34 H H102 MYR . . . E 2 -32.745 -1.795 -49.485 1 82.59 ? H102 MYR 601 C 1 HETATM 35 H H111 MYR . . . E 2 -33.627 -2.244 -46.698 1 97.48 ? H111 MYR 601 C 1 HETATM 36 H H112 MYR . . . E 2 -32.27 -2.943 -47.579 1 97.48 ? H112 MYR 601 C 1 HETATM 37 H H121 MYR . . . E 2 -32.301 -0.125 -46.434 1 87.16 ? H121 MYR 601 C 1 HETATM 38 H H122 MYR . . . E 2 -31.602 -1.523 -45.619 1 87.16 ? H122 MYR 601 C 1 HETATM 39 H H131 MYR . . . E 2 -30.267 -1.791 -47.904 1 84.06 ? H131 MYR 601 C 1 HETATM 40 H H132 MYR . . . E 2 -30.646 -0.079 -48.082 1 84.06 ? H132 MYR 601 C 1 HETATM 41 H H141 MYR . . . E 2 -29.793 -0.287 -45.423 1 79.79 ? H141 MYR 601 C 1 HETATM 42 H H142 MYR . . . E 2 -28.834 0.326 -46.79 1 79.79 ? H142 MYR 601 C 1 HETATM 43 H H143 MYR . . . E 2 -28.708 -1.383 -46.311 1 79.79 ? H143 MYR 601 C 1 # _model_server_stats.io_time_ms 165 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 43 #