data_6VX1
#
_model_server_result.job_id            QqnuxgDD4gV5pOYo3rhfIw 
_model_server_result.datetime_utc      '2024-10-20 01:20:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vx1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":701}' 
#
_entry.id    6VX1 
#
_exptl.entry_id    6VX1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.64 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IRON/SULFUR CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VX1 
_cell.length_a            65.61 
_cell.length_b            112.12 
_cell.length_c            194.43 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VX1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 51 A CYS 51 1_555 C FE1 SF4 . A SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc2 A SG CYS 54 A CYS 54 1_555 C FE4 SF4 . A SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc3 A SG CYS 59 A CYS 59 1_555 C FE2 SF4 . A SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc4 A SG CYS 74 A CYS 74 1_555 C FE3 SF4 . A SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc5 A NE2 HIS 266 A HIS 266 1_555 D NI CUV . A CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc6 A SG CYS 302 A CYS 302 1_555 D NI CUV . A CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc7 A SG CYS 340 A CYS 340 1_555 D FE1 CUV . A CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc8 A SG CYS 448 A CYS 448 1_555 D FE3 CUV . A CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc9 A SG CYS 478 A CYS 478 1_555 D FE4 CUV . A CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc10 B SG CYS 51 B CYS 51 1_555 E FE1 SF4 . B SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc11 B SG CYS 54 B CYS 54 1_555 E FE4 SF4 . B SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc12 B SG CYS 59 B CYS 59 1_555 E FE2 SF4 . B SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc13 B SG CYS 74 B CYS 74 1_555 E FE3 SF4 . B SF4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc14 B NE2 HIS 266 B HIS 266 1_555 F NI CUV . B CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc15 B SG CYS 302 B CYS 302 1_555 F NI CUV . B CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc16 B SG CYS 340 B CYS 340 1_555 F FE1 CUV . B CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc17 B SG CYS 448 B CYS 448 1_555 F FE3 CUV . B CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc18 B SG CYS 478 B CYS 478 1_555 F FE4 CUV . B CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc19 B NZ LYS 556 B LYS 556 1_555 F NI CUV . B CUV 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? 
#
_chem_comp.formula           'Fe4 S4' 
_chem_comp.formula_weight    351.64 
_chem_comp.id                SF4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IRON/SULFUR CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S2 SF4 sing 300 n n 
FE1 S3 SF4 sing 301 n n 
FE1 S4 SF4 sing 302 n n 
FE2 S1 SF4 sing 303 n n 
FE2 S3 SF4 sing 304 n n 
FE2 S4 SF4 sing 305 n n 
FE3 S1 SF4 sing 306 n n 
FE3 S2 SF4 sing 307 n n 
FE3 S4 SF4 sing 308 n n 
FE4 S1 SF4 sing 309 n n 
FE4 S2 SF4 sing 310 n n 
FE4 S3 SF4 sing 311 n n 
#
_atom_sites.entry_id                     6VX1 
_atom_sites.fract_transf_matrix[1][1]    0.015242 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008919 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005143 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SF4 A 1 701 700 SF4 SF4 . 
D 3 CUV A 1 702 800 CUV ZCC . 
E 2 SF4 B 1 701 700 SF4 SF4 . 
F 3 CUV B 1 702 800 CUV ZCC . 
G 4 HOH A 1 801 52 HOH HOH . 
G 4 HOH A 2 802 8 HOH HOH . 
G 4 HOH A 3 803 22 HOH HOH . 
G 4 HOH A 4 804 24 HOH HOH . 
G 4 HOH A 5 805 88 HOH HOH . 
G 4 HOH A 6 806 40 HOH HOH . 
G 4 HOH A 7 807 113 HOH HOH . 
G 4 HOH A 8 808 13 HOH HOH . 
G 4 HOH A 9 809 51 HOH HOH . 
G 4 HOH A 10 810 58 HOH HOH . 
G 4 HOH A 11 811 108 HOH HOH . 
G 4 HOH A 12 812 30 HOH HOH . 
G 4 HOH A 13 813 9 HOH HOH . 
G 4 HOH A 14 814 34 HOH HOH . 
G 4 HOH A 15 815 35 HOH HOH . 
G 4 HOH A 16 816 112 HOH HOH . 
G 4 HOH A 17 817 1 HOH HOH . 
G 4 HOH A 18 818 57 HOH HOH . 
G 4 HOH A 19 819 107 HOH HOH . 
G 4 HOH A 20 820 62 HOH HOH . 
G 4 HOH A 21 821 53 HOH HOH . 
G 4 HOH A 22 822 69 HOH HOH . 
G 4 HOH A 23 823 29 HOH HOH . 
G 4 HOH A 24 824 23 HOH HOH . 
G 4 HOH A 25 825 6 HOH HOH . 
G 4 HOH A 26 826 114 HOH HOH . 
G 4 HOH A 27 827 18 HOH HOH . 
G 4 HOH A 28 828 3 HOH HOH . 
G 4 HOH A 29 829 15 HOH HOH . 
G 4 HOH A 30 830 55 HOH HOH . 
G 4 HOH A 31 831 31 HOH HOH . 
G 4 HOH A 32 832 42 HOH HOH . 
G 4 HOH A 33 833 37 HOH HOH . 
G 4 HOH A 34 834 68 HOH HOH . 
G 4 HOH A 35 835 25 HOH HOH . 
G 4 HOH A 36 836 94 HOH HOH . 
G 4 HOH A 37 837 46 HOH HOH . 
G 4 HOH A 38 838 60 HOH HOH . 
G 4 HOH A 39 839 79 HOH HOH . 
G 4 HOH A 40 840 118 HOH HOH . 
G 4 HOH A 41 841 91 HOH HOH . 
G 4 HOH A 42 842 81 HOH HOH . 
G 4 HOH A 43 843 63 HOH HOH . 
G 4 HOH A 44 844 44 HOH HOH . 
G 4 HOH A 45 845 21 HOH HOH . 
G 4 HOH A 46 846 86 HOH HOH . 
G 4 HOH A 47 847 49 HOH HOH . 
G 4 HOH A 48 848 83 HOH HOH . 
G 4 HOH A 49 849 82 HOH HOH . 
G 4 HOH A 50 850 87 HOH HOH . 
G 4 HOH A 51 851 92 HOH HOH . 
G 4 HOH A 52 852 117 HOH HOH . 
G 4 HOH A 53 853 95 HOH HOH . 
G 4 HOH A 54 854 75 HOH HOH . 
G 4 HOH A 55 855 93 HOH HOH . 
G 4 HOH A 56 856 73 HOH HOH . 
G 4 HOH A 57 857 64 HOH HOH . 
G 4 HOH A 58 858 77 HOH HOH . 
G 4 HOH A 59 859 61 HOH HOH . 
G 4 HOH A 60 860 66 HOH HOH . 
G 4 HOH A 61 861 106 HOH HOH . 
G 4 HOH A 62 862 74 HOH HOH . 
H 4 HOH B 1 801 84 HOH HOH . 
H 4 HOH B 2 802 104 HOH HOH . 
H 4 HOH B 3 803 10 HOH HOH . 
H 4 HOH B 4 804 17 HOH HOH . 
H 4 HOH B 5 805 4 HOH HOH . 
H 4 HOH B 6 806 85 HOH HOH . 
H 4 HOH B 7 807 7 HOH HOH . 
H 4 HOH B 8 808 90 HOH HOH . 
H 4 HOH B 9 809 26 HOH HOH . 
H 4 HOH B 10 810 98 HOH HOH . 
H 4 HOH B 11 811 71 HOH HOH . 
H 4 HOH B 12 812 50 HOH HOH . 
H 4 HOH B 13 813 47 HOH HOH . 
H 4 HOH B 14 814 5 HOH HOH . 
H 4 HOH B 15 815 45 HOH HOH . 
H 4 HOH B 16 816 78 HOH HOH . 
H 4 HOH B 17 817 39 HOH HOH . 
H 4 HOH B 18 818 27 HOH HOH . 
H 4 HOH B 19 819 2 HOH HOH . 
H 4 HOH B 20 820 70 HOH HOH . 
H 4 HOH B 21 821 14 HOH HOH . 
H 4 HOH B 22 822 99 HOH HOH . 
H 4 HOH B 23 823 12 HOH HOH . 
H 4 HOH B 24 824 20 HOH HOH . 
H 4 HOH B 25 825 11 HOH HOH . 
H 4 HOH B 26 826 19 HOH HOH . 
H 4 HOH B 27 827 116 HOH HOH . 
H 4 HOH B 28 828 54 HOH HOH . 
H 4 HOH B 29 829 48 HOH HOH . 
H 4 HOH B 30 830 32 HOH HOH . 
H 4 HOH B 31 831 41 HOH HOH . 
H 4 HOH B 32 832 103 HOH HOH . 
H 4 HOH B 33 833 16 HOH HOH . 
H 4 HOH B 34 834 105 HOH HOH . 
H 4 HOH B 35 835 76 HOH HOH . 
H 4 HOH B 36 836 38 HOH HOH . 
H 4 HOH B 37 837 115 HOH HOH . 
H 4 HOH B 38 838 28 HOH HOH . 
H 4 HOH B 39 839 89 HOH HOH . 
H 4 HOH B 40 840 101 HOH HOH . 
H 4 HOH B 41 841 67 HOH HOH . 
H 4 HOH B 42 842 36 HOH HOH . 
H 4 HOH B 43 843 59 HOH HOH . 
H 4 HOH B 44 844 110 HOH HOH . 
H 4 HOH B 45 845 56 HOH HOH . 
H 4 HOH B 46 846 109 HOH HOH . 
H 4 HOH B 47 847 72 HOH HOH . 
H 4 HOH B 48 848 65 HOH HOH . 
H 4 HOH B 49 849 100 HOH HOH . 
H 4 HOH B 50 850 43 HOH HOH . 
H 4 HOH B 51 851 80 HOH HOH . 
H 4 HOH B 52 852 96 HOH HOH . 
H 4 HOH B 53 853 33 HOH HOH . 
H 4 HOH B 54 854 111 HOH HOH . 
H 4 HOH B 55 855 97 HOH HOH . 
H 4 HOH B 56 856 102 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 SF4 . . . E 2 -20.893 -10.982 17.259 1 49.41 ? FE1 SF4 701 B 1 
HETATM 2 FE FE2 SF4 . . . E 2 -21.699 -13.601 17.097 1 44.53 ? FE2 SF4 701 B 1 
HETATM 3 FE FE3 SF4 . . . E 2 -20.55 -12.38 14.926 1 41.53 ? FE3 SF4 701 B 1 
HETATM 4 FE FE4 SF4 . . . E 2 -23.074 -11.649 15.74 1 43.43 ? FE4 SF4 701 B 1 
HETATM 5 S S1 SF4 . . . E 2 -22.424 -13.692 14.94 1 45.1 ? S1 SF4 701 B 1 
HETATM 6 S S2 SF4 . . . E 2 -21.361 -10.252 15.154 1 44.3 ? S2 SF4 701 B 1 
HETATM 7 S S3 SF4 . . . E 2 -22.872 -11.859 18.001 1 41.67 ? S3 SF4 701 B 1 
HETATM 8 S S4 SF4 . . . E 2 -19.559 -12.81 16.929 1 43.66 ? S4 SF4 701 B 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#