data_6VX3 # _model_server_result.job_id 0MQaGkxHcnk9ofR3xiDqRg _model_server_result.datetime_utc '2024-11-21 13:50:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vx3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 6VX3 # _exptl.entry_id 6VX3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OE1 GLN 178 C GLN 178 1_555 E C32 POV . C POV 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? covale ? covale2 B OE1 GLN 178 A GLN 178 1_555 G C32 POV . A POV 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? covale ? covale3 C OE1 GLN 178 B GLN 178 1_555 I C32 POV . B POV 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? covale ? covale4 D OE1 GLN 178 D GLN 178 1_555 K C32 POV . D POV 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # _atom_sites.entry_id 6VX3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 POV C 1 301 1 POV POV . F 2 POV C 1 302 2 POV POV . G 2 POV A 1 301 3 POV POV . H 2 POV A 1 302 4 POV POV . I 2 POV B 1 301 5 POV POV . J 2 POV B 1 302 6 POV POV . K 2 POV D 1 301 7 POV POV . L 2 POV D 1 302 8 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . I 2 160.371 108.901 109.375 1 89.9 ? N POV 301 B 1 HETATM 2 P P POV . . . I 2 157.004 111.794 109.145 1 89.9 ? P POV 301 B 1 HETATM 3 C C1 POV . . . I 2 157.902 111.344 111.582 1 89.9 ? C1 POV 301 B 1 HETATM 4 C C2 POV . . . I 2 157.045 112.163 112.537 1 89.9 ? C2 POV 301 B 1 HETATM 5 C C3 POV . . . I 2 157.123 113.634 112.149 1 89.9 ? C3 POV 301 B 1 HETATM 6 C C210 POV . . . I 2 153.555 111.127 124.413 1 89.9 ? C210 POV 301 B 1 HETATM 7 C C310 POV . . . I 2 151.32 114.938 122.528 1 89.9 ? C310 POV 301 B 1 HETATM 8 C C11 POV . . . I 2 159.199 110.698 108.167 1 89.9 ? C11 POV 301 B 1 HETATM 9 O O11 POV . . . I 2 157.107 110.906 110.482 1 89.9 ? O11 POV 301 B 1 HETATM 10 C C211 POV . . . I 2 152.65 110.592 125.497 1 89.9 ? C211 POV 301 B 1 HETATM 11 C C311 POV . . . I 2 150.49 115.941 123.318 1 89.9 ? C311 POV 301 B 1 HETATM 12 C C12 POV . . . I 2 159.075 109.574 109.19 1 89.9 ? C12 POV 301 B 1 HETATM 13 O O12 POV . . . I 2 158.532 111.864 108.647 1 89.9 ? O12 POV 301 B 1 HETATM 14 C C212 POV . . . I 2 152.022 111.747 126.269 1 89.9 ? C212 POV 301 B 1 HETATM 15 C C312 POV . . . I 2 150.87 115.921 124.794 1 89.9 ? C312 POV 301 B 1 HETATM 16 C C13 POV . . . I 2 161.113 108.882 108.107 1 89.9 ? C13 POV 301 B 1 HETATM 17 O O13 POV . . . I 2 156.569 113.183 109.541 1 89.9 ? O13 POV 301 B 1 HETATM 18 C C213 POV . . . I 2 150.71 111.332 126.927 1 89.9 ? C213 POV 301 B 1 HETATM 19 C C313 POV . . . I 2 150.074 116.953 125.584 1 89.9 ? C313 POV 301 B 1 HETATM 20 C C14 POV . . . I 2 161.157 109.616 110.39 1 89.9 ? C14 POV 301 B 1 HETATM 21 O O14 POV . . . I 2 156.209 111.019 108.123 1 89.9 ? O14 POV 301 B 1 HETATM 22 C C214 POV . . . I 2 150.492 112.083 128.236 1 89.9 ? C214 POV 301 B 1 HETATM 23 C C314 POV . . . I 2 149.245 117.838 124.664 1 89.9 ? C314 POV 301 B 1 HETATM 24 C C15 POV . . . I 2 160.146 107.521 109.823 1 89.9 ? C15 POV 301 B 1 HETATM 25 C C215 POV . . . I 2 149.966 111.146 129.317 1 89.9 ? C215 POV 301 B 1 HETATM 26 C C315 POV . . . I 2 148.494 118.896 125.462 1 89.9 ? C315 POV 301 B 1 HETATM 27 C C216 POV . . . I 2 150.49 111.529 130.696 1 89.9 ? C216 POV 301 B 1 HETATM 28 C C316 POV . . . I 2 149.466 119.849 126.118 1 89.9 ? C316 POV 301 B 1 HETATM 29 C C217 POV . . . I 2 150.449 110.334 131.643 1 89.9 ? C217 POV 301 B 1 HETATM 30 C C218 POV . . . I 2 150.507 110.775 133.089 1 89.9 ? C218 POV 301 B 1 HETATM 31 C C21 POV . . . I 2 157.204 110.691 114.414 1 89.9 ? C21 POV 301 B 1 HETATM 32 O O21 POV . . . I 2 157.527 111.999 113.869 1 89.9 ? O21 POV 301 B 1 HETATM 33 C C22 POV . . . I 2 157.156 110.479 115.91 1 89.9 ? C22 POV 301 B 1 HETATM 34 O O22 POV . . . I 2 156.977 109.77 113.649 1 89.9 ? O22 POV 301 B 1 HETATM 35 C C23 POV . . . I 2 155.734 110.702 116.413 1 89.9 ? C23 POV 301 B 1 HETATM 36 C C24 POV . . . I 2 155.66 110.578 117.931 1 89.9 ? C24 POV 301 B 1 HETATM 37 C C25 POV . . . I 2 154.333 111.107 118.462 1 89.9 ? C25 POV 301 B 1 HETATM 38 C C26 POV . . . I 2 153.94 110.39 119.746 1 89.9 ? C26 POV 301 B 1 HETATM 39 C C27 POV . . . I 2 153.62 111.383 120.856 1 89.9 ? C27 POV 301 B 1 HETATM 40 C C28 POV . . . I 2 154.439 111.096 122.11 1 89.9 ? C28 POV 301 B 1 HETATM 41 C C29 POV . . . I 2 153.538 110.572 123.204 1 89.9 ? C29 POV 301 B 1 HETATM 42 C C31 POV . . . I 2 156.411 114.723 114.277 1 89.9 ? C31 POV 301 B 1 HETATM 43 O O31 POV . . . I 2 156.154 114.37 112.891 1 89.9 ? O31 POV 301 B 1 HETATM 44 C C32 POV . . . I 2 155.397 115.506 115.071 1 89.9 ? C32 POV 301 B 1 HETATM 45 O O32 POV . . . I 2 157.46 114.378 114.792 1 89.9 ? O32 POV 301 B 1 HETATM 46 C C33 POV . . . I 2 156.004 115.859 116.422 1 89.9 ? C33 POV 301 B 1 HETATM 47 C C34 POV . . . I 2 155.121 115.365 117.559 1 89.9 ? C34 POV 301 B 1 HETATM 48 C C35 POV . . . I 2 153.942 116.302 117.768 1 89.9 ? C35 POV 301 B 1 HETATM 49 C C36 POV . . . I 2 153.411 116.17 119.185 1 89.9 ? C36 POV 301 B 1 HETATM 50 C C37 POV . . . I 2 153.755 114.802 119.752 1 89.9 ? C37 POV 301 B 1 HETATM 51 C C38 POV . . . I 2 153.466 114.762 121.244 1 89.9 ? C38 POV 301 B 1 HETATM 52 C C39 POV . . . I 2 152.274 115.65 121.577 1 89.9 ? C39 POV 301 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 52 #