data_6VXN
#
_model_server_result.job_id            gFtwdTyJVG3N0U6XxVl_-w 
_model_server_result.datetime_utc      '2024-11-04 22:33:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vxn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":1102}' 
#
_entry.id    6VXN 
#
_exptl.entry_id    6VXN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              170.335 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECANE 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VXN 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VXN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
#
_chem_comp.formula           'C12 H26' 
_chem_comp.formula_weight    170.335 
_chem_comp.id                D12 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 D12 sing 83 n n 
C1 H11 D12 sing 84 n n 
C1 H12 D12 sing 85 n n 
C1 H13 D12 sing 86 n n 
C2 C3 D12 sing 87 n n 
C2 H21 D12 sing 88 n n 
C2 H22 D12 sing 89 n n 
C3 C4 D12 sing 90 n n 
C3 H31 D12 sing 91 n n 
C3 H32 D12 sing 92 n n 
C4 C5 D12 sing 93 n n 
C4 H41 D12 sing 94 n n 
C4 H42 D12 sing 95 n n 
C5 C6 D12 sing 96 n n 
C5 H51 D12 sing 97 n n 
C5 H52 D12 sing 98 n n 
C6 C7 D12 sing 99 n n 
C6 H61 D12 sing 100 n n 
C6 H62 D12 sing 101 n n 
C7 C8 D12 sing 102 n n 
C7 H71 D12 sing 103 n n 
C7 H72 D12 sing 104 n n 
C8 C9 D12 sing 105 n n 
C8 H81 D12 sing 106 n n 
C8 H82 D12 sing 107 n n 
C9 C10 D12 sing 108 n n 
C9 H91 D12 sing 109 n n 
C9 H92 D12 sing 110 n n 
C10 C11 D12 sing 111 n n 
C10 H101 D12 sing 112 n n 
C10 H102 D12 sing 113 n n 
C11 C12 D12 sing 114 n n 
C11 H111 D12 sing 115 n n 
C11 H112 D12 sing 116 n n 
C12 H121 D12 sing 117 n n 
C12 H122 D12 sing 118 n n 
C12 H123 D12 sing 119 n n 
#
_atom_sites.entry_id                     6VXN 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 D12 B 1 1101 1101 D12 LIG . 
I 2 D12 C 1 1101 1101 D12 LIG . 
J 2 D12 C 1 1102 1101 D12 LIG . 
K 2 D12 D 1 1101 1101 D12 LIG . 
L 2 D12 F 1 1101 1101 D12 LIG . 
M 2 D12 G 1 1101 1101 D12 LIG . 
N 2 D12 G 1 1102 1101 D12 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 D12 . . . N 2 123.857 158.913 132.986 1 110.97 ? C1 D12 1102 G 1 
HETATM 2 C C2 D12 . . . N 2 124.385 158.529 134.205 1 110.97 ? C2 D12 1102 G 1 
HETATM 3 C C3 D12 . . . N 2 124.608 157.193 134.479 1 110.97 ? C3 D12 1102 G 1 
HETATM 4 C C4 D12 . . . N 2 125.899 156.705 134.498 1 110.97 ? C4 D12 1102 G 1 
HETATM 5 C C5 D12 . . . N 2 126.449 156.266 135.682 1 110.97 ? C5 D12 1102 G 1 
HETATM 6 C C6 D12 . . . N 2 127.372 155.245 135.66 1 110.97 ? C6 D12 1102 G 1 
HETATM 7 C C7 D12 . . . N 2 128.52 155.369 136.409 1 110.97 ? C7 D12 1102 G 1 
HETATM 8 C C8 D12 . . . N 2 129.686 154.797 135.951 1 110.97 ? C8 D12 1102 G 1 
HETATM 9 C C9 D12 . . . N 2 130.895 155.151 136.518 1 110.97 ? C9 D12 1102 G 1 
HETATM 10 C C10 D12 . . . N 2 131.365 154.443 137.605 1 110.97 ? C10 D12 1102 G 1 
HETATM 11 C C11 D12 . . . N 2 132.433 153.586 137.441 1 110.97 ? C11 D12 1102 G 1 
HETATM 12 C C12 D12 . . . N 2 133.452 153.937 136.577 1 110.97 ? C12 D12 1102 G 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           12 
#