data_6VYE # _model_server_result.job_id 5nkHjOoxPkPM-e8PJfPaHA _model_server_result.datetime_utc '2024-11-23 01:46:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vye # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6VYE # _exptl.entry_id 6VYE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.91 _cell.angle_gamma 90 _cell.entry_id 6VYE _cell.length_a 71.77 _cell.length_b 63.39 _cell.length_c 79.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VYE _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 6VYE _atom_sites.fract_transf_matrix[1][1] 0.013933 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001197 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 301 1 PO4 PO4 . D 2 PO4 A 1 302 2 PO4 PO4 . E 3 GOL A 1 303 4 GOL GOL . F 3 GOL A 1 304 6 GOL GOL . G 2 PO4 B 1 301 3 PO4 PO4 . H 3 GOL B 1 302 5 GOL GOL . I 4 HOH A 1 401 172 HOH HOH . I 4 HOH A 2 402 10 HOH HOH . I 4 HOH A 3 403 25 HOH HOH . I 4 HOH A 4 404 88 HOH HOH . I 4 HOH A 5 405 89 HOH HOH . I 4 HOH A 6 406 186 HOH HOH . I 4 HOH A 7 407 44 HOH HOH . I 4 HOH A 8 408 207 HOH HOH . I 4 HOH A 9 409 65 HOH HOH . I 4 HOH A 10 410 173 HOH HOH . I 4 HOH A 11 411 23 HOH HOH . I 4 HOH A 12 412 197 HOH HOH . I 4 HOH A 13 413 36 HOH HOH . I 4 HOH A 14 414 159 HOH HOH . I 4 HOH A 15 415 211 HOH HOH . I 4 HOH A 16 416 169 HOH HOH . I 4 HOH A 17 417 67 HOH HOH . I 4 HOH A 18 418 150 HOH HOH . I 4 HOH A 19 419 118 HOH HOH . I 4 HOH A 20 420 145 HOH HOH . I 4 HOH A 21 421 3 HOH HOH . I 4 HOH A 22 422 90 HOH HOH . I 4 HOH A 23 423 53 HOH HOH . I 4 HOH A 24 424 124 HOH HOH . I 4 HOH A 25 425 41 HOH HOH . I 4 HOH A 26 426 193 HOH HOH . I 4 HOH A 27 427 179 HOH HOH . I 4 HOH A 28 428 51 HOH HOH . I 4 HOH A 29 429 177 HOH HOH . I 4 HOH A 30 430 182 HOH HOH . I 4 HOH A 31 431 180 HOH HOH . I 4 HOH A 32 432 153 HOH HOH . I 4 HOH A 33 433 122 HOH HOH . I 4 HOH A 34 434 104 HOH HOH . I 4 HOH A 35 435 42 HOH HOH . I 4 HOH A 36 436 60 HOH HOH . I 4 HOH A 37 437 229 HOH HOH . I 4 HOH A 38 438 47 HOH HOH . I 4 HOH A 39 439 198 HOH HOH . I 4 HOH A 40 440 111 HOH HOH . I 4 HOH A 41 441 35 HOH HOH . I 4 HOH A 42 442 19 HOH HOH . I 4 HOH A 43 443 2 HOH HOH . I 4 HOH A 44 444 167 HOH HOH . I 4 HOH A 45 445 154 HOH HOH . I 4 HOH A 46 446 30 HOH HOH . I 4 HOH A 47 447 16 HOH HOH . I 4 HOH A 48 448 5 HOH HOH . I 4 HOH A 49 449 117 HOH HOH . I 4 HOH A 50 450 18 HOH HOH . I 4 HOH A 51 451 148 HOH HOH . I 4 HOH A 52 452 231 HOH HOH . I 4 HOH A 53 453 189 HOH HOH . I 4 HOH A 54 454 175 HOH HOH . I 4 HOH A 55 455 190 HOH HOH . I 4 HOH A 56 456 92 HOH HOH . I 4 HOH A 57 457 219 HOH HOH . I 4 HOH A 58 458 206 HOH HOH . I 4 HOH A 59 459 7 HOH HOH . I 4 HOH A 60 460 83 HOH HOH . I 4 HOH A 61 461 27 HOH HOH . I 4 HOH A 62 462 225 HOH HOH . I 4 HOH A 63 463 209 HOH HOH . I 4 HOH A 64 464 57 HOH HOH . I 4 HOH A 65 465 63 HOH HOH . I 4 HOH A 66 466 70 HOH HOH . I 4 HOH A 67 467 130 HOH HOH . I 4 HOH A 68 468 95 HOH HOH . I 4 HOH A 69 469 77 HOH HOH . I 4 HOH A 70 470 202 HOH HOH . I 4 HOH A 71 471 39 HOH HOH . I 4 HOH A 72 472 142 HOH HOH . I 4 HOH A 73 473 49 HOH HOH . I 4 HOH A 74 474 43 HOH HOH . I 4 HOH A 75 475 9 HOH HOH . I 4 HOH A 76 476 28 HOH HOH . I 4 HOH A 77 477 50 HOH HOH . I 4 HOH A 78 478 106 HOH HOH . I 4 HOH A 79 479 144 HOH HOH . I 4 HOH A 80 480 162 HOH HOH . I 4 HOH A 81 481 210 HOH HOH . I 4 HOH A 82 482 110 HOH HOH . I 4 HOH A 83 483 151 HOH HOH . I 4 HOH A 84 484 113 HOH HOH . I 4 HOH A 85 485 132 HOH HOH . I 4 HOH A 86 486 126 HOH HOH . I 4 HOH A 87 487 239 HOH HOH . I 4 HOH A 88 488 55 HOH HOH . I 4 HOH A 89 489 26 HOH HOH . I 4 HOH A 90 490 24 HOH HOH . I 4 HOH A 91 491 13 HOH HOH . I 4 HOH A 92 492 108 HOH HOH . I 4 HOH A 93 493 40 HOH HOH . I 4 HOH A 94 494 149 HOH HOH . I 4 HOH A 95 495 52 HOH HOH . I 4 HOH A 96 496 78 HOH HOH . I 4 HOH A 97 497 129 HOH HOH . I 4 HOH A 98 498 176 HOH HOH . I 4 HOH A 99 499 222 HOH HOH . I 4 HOH A 100 500 204 HOH HOH . I 4 HOH A 101 501 147 HOH HOH . I 4 HOH A 102 502 56 HOH HOH . I 4 HOH A 103 503 100 HOH HOH . I 4 HOH A 104 504 208 HOH HOH . I 4 HOH A 105 505 76 HOH HOH . I 4 HOH A 106 506 146 HOH HOH . I 4 HOH A 107 507 75 HOH HOH . I 4 HOH A 108 508 74 HOH HOH . I 4 HOH A 109 509 194 HOH HOH . I 4 HOH A 110 510 235 HOH HOH . I 4 HOH A 111 511 164 HOH HOH . I 4 HOH A 112 512 161 HOH HOH . I 4 HOH A 113 513 234 HOH HOH . J 4 HOH B 1 401 213 HOH HOH . J 4 HOH B 2 402 217 HOH HOH . J 4 HOH B 3 403 185 HOH HOH . J 4 HOH B 4 404 228 HOH HOH . J 4 HOH B 5 405 34 HOH HOH . J 4 HOH B 6 406 119 HOH HOH . J 4 HOH B 7 407 215 HOH HOH . J 4 HOH B 8 408 54 HOH HOH . J 4 HOH B 9 409 93 HOH HOH . J 4 HOH B 10 410 79 HOH HOH . J 4 HOH B 11 411 73 HOH HOH . J 4 HOH B 12 412 178 HOH HOH . J 4 HOH B 13 413 125 HOH HOH . J 4 HOH B 14 414 226 HOH HOH . J 4 HOH B 15 415 37 HOH HOH . J 4 HOH B 16 416 171 HOH HOH . J 4 HOH B 17 417 158 HOH HOH . J 4 HOH B 18 418 224 HOH HOH . J 4 HOH B 19 419 123 HOH HOH . J 4 HOH B 20 420 114 HOH HOH . J 4 HOH B 21 421 221 HOH HOH . J 4 HOH B 22 422 133 HOH HOH . J 4 HOH B 23 423 61 HOH HOH . J 4 HOH B 24 424 238 HOH HOH . J 4 HOH B 25 425 131 HOH HOH . J 4 HOH B 26 426 94 HOH HOH . J 4 HOH B 27 427 31 HOH HOH . J 4 HOH B 28 428 11 HOH HOH . J 4 HOH B 29 429 6 HOH HOH . J 4 HOH B 30 430 240 HOH HOH . J 4 HOH B 31 431 22 HOH HOH . J 4 HOH B 32 432 4 HOH HOH . J 4 HOH B 33 433 82 HOH HOH . J 4 HOH B 34 434 181 HOH HOH . J 4 HOH B 35 435 68 HOH HOH . J 4 HOH B 36 436 109 HOH HOH . J 4 HOH B 37 437 236 HOH HOH . J 4 HOH B 38 438 81 HOH HOH . J 4 HOH B 39 439 230 HOH HOH . J 4 HOH B 40 440 187 HOH HOH . J 4 HOH B 41 441 183 HOH HOH . J 4 HOH B 42 442 101 HOH HOH . J 4 HOH B 43 443 138 HOH HOH . J 4 HOH B 44 444 45 HOH HOH . J 4 HOH B 45 445 220 HOH HOH . J 4 HOH B 46 446 33 HOH HOH . J 4 HOH B 47 447 62 HOH HOH . J 4 HOH B 48 448 69 HOH HOH . J 4 HOH B 49 449 14 HOH HOH . J 4 HOH B 50 450 58 HOH HOH . J 4 HOH B 51 451 32 HOH HOH . J 4 HOH B 52 452 163 HOH HOH . J 4 HOH B 53 453 127 HOH HOH . J 4 HOH B 54 454 96 HOH HOH . J 4 HOH B 55 455 165 HOH HOH . J 4 HOH B 56 456 12 HOH HOH . J 4 HOH B 57 457 17 HOH HOH . J 4 HOH B 58 458 46 HOH HOH . J 4 HOH B 59 459 91 HOH HOH . J 4 HOH B 60 460 115 HOH HOH . J 4 HOH B 61 461 15 HOH HOH . J 4 HOH B 62 462 152 HOH HOH . J 4 HOH B 63 463 21 HOH HOH . J 4 HOH B 64 464 218 HOH HOH . J 4 HOH B 65 465 98 HOH HOH . J 4 HOH B 66 466 97 HOH HOH . J 4 HOH B 67 467 87 HOH HOH . J 4 HOH B 68 468 29 HOH HOH . J 4 HOH B 69 469 80 HOH HOH . J 4 HOH B 70 470 188 HOH HOH . J 4 HOH B 71 471 192 HOH HOH . J 4 HOH B 72 472 160 HOH HOH . J 4 HOH B 73 473 20 HOH HOH . J 4 HOH B 74 474 184 HOH HOH . J 4 HOH B 75 475 141 HOH HOH . J 4 HOH B 76 476 107 HOH HOH . J 4 HOH B 77 477 216 HOH HOH . J 4 HOH B 78 478 212 HOH HOH . J 4 HOH B 79 479 166 HOH HOH . J 4 HOH B 80 480 134 HOH HOH . J 4 HOH B 81 481 237 HOH HOH . J 4 HOH B 82 482 8 HOH HOH . J 4 HOH B 83 483 59 HOH HOH . J 4 HOH B 84 484 1 HOH HOH . J 4 HOH B 85 485 102 HOH HOH . J 4 HOH B 86 486 200 HOH HOH . J 4 HOH B 87 487 191 HOH HOH . J 4 HOH B 88 488 85 HOH HOH . J 4 HOH B 89 489 232 HOH HOH . J 4 HOH B 90 490 71 HOH HOH . J 4 HOH B 91 491 128 HOH HOH . J 4 HOH B 92 492 227 HOH HOH . J 4 HOH B 93 493 38 HOH HOH . J 4 HOH B 94 494 66 HOH HOH . J 4 HOH B 95 495 203 HOH HOH . J 4 HOH B 96 496 139 HOH HOH . J 4 HOH B 97 497 205 HOH HOH . J 4 HOH B 98 498 223 HOH HOH . J 4 HOH B 99 499 170 HOH HOH . J 4 HOH B 100 500 168 HOH HOH . J 4 HOH B 101 501 199 HOH HOH . J 4 HOH B 102 502 233 HOH HOH . J 4 HOH B 103 503 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 35.886 14.884 -0.002 0.5 19.84 ? P PO4 301 A 1 HETATM 2 O O1 PO4 . . . C 2 37.209 15.188 -0.73 0.5 23.03 ? O1 PO4 301 A 1 HETATM 3 O O2 PO4 . . . C 2 34.902 15.952 -0.371 0.5 19.68 ? O2 PO4 301 A 1 HETATM 4 O O3 PO4 . . . C 2 35.379 13.57 -0.518 0.5 22.1 ? O3 PO4 301 A 1 HETATM 5 O O4 PO4 . . . C 2 36.178 14.832 1.444 0.5 19.87 ? O4 PO4 301 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #