data_6VZ0 # _model_server_result.job_id rBnlzIoLKfXVGz1hQRgUxw _model_server_result.datetime_utc '2024-11-05 08:36:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 6VZ0 # _exptl.entry_id 6VZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VZ0 _cell.length_a 38.396 _cell.length_b 58.36 _cell.length_c 64.673 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf2 A SG CYS 8 A CYS 8 1_555 A SG CYS 66 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf3 A SG CYS 31 A CYS 31 1_555 A SG CYS 41 A CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? disulf ? disulf4 B SG CYS 5 B CYS 5 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf5 B SG CYS 8 B CYS 8 1_555 B SG CYS 66 B CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf6 B SG CYS 31 B CYS 31 1_555 B SG CYS 41 B CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc1 A OD1 ASP 2 A ASP 2 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc2 A OD2 ASP 2 A ASP 2 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc3 A NE2 HIS 6 A HIS 6 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc4 C ZN ZN . A ZN 101 2_574 B OD1 ASP 2 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc5 C ZN ZN . A ZN 101 2_574 B NE2 HIS 6 B HIS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc6 C ZN ZN . A ZN 101 1_555 E O HOH . B HOH 101 2_575 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6VZ0 _atom_sites.fract_transf_matrix[1][1] 0.026044 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017135 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 101 1 ZN ZN . D 3 HOH A 1 201 77 HOH HOH . D 3 HOH A 2 202 49 HOH HOH . D 3 HOH A 3 203 79 HOH HOH . D 3 HOH A 4 204 84 HOH HOH . D 3 HOH A 5 205 120 HOH HOH . D 3 HOH A 6 206 11 HOH HOH . D 3 HOH A 7 207 20 HOH HOH . D 3 HOH A 8 208 36 HOH HOH . D 3 HOH A 9 209 107 HOH HOH . D 3 HOH A 10 210 2 HOH HOH . D 3 HOH A 11 211 121 HOH HOH . D 3 HOH A 12 212 87 HOH HOH . D 3 HOH A 13 213 1 HOH HOH . D 3 HOH A 14 214 74 HOH HOH . D 3 HOH A 15 215 26 HOH HOH . D 3 HOH A 16 216 3 HOH HOH . D 3 HOH A 17 217 32 HOH HOH . D 3 HOH A 18 218 19 HOH HOH . D 3 HOH A 19 219 38 HOH HOH . D 3 HOH A 20 220 14 HOH HOH . D 3 HOH A 21 221 54 HOH HOH . D 3 HOH A 22 222 6 HOH HOH . D 3 HOH A 23 223 69 HOH HOH . D 3 HOH A 24 224 85 HOH HOH . D 3 HOH A 25 225 65 HOH HOH . D 3 HOH A 26 226 94 HOH HOH . D 3 HOH A 27 227 8 HOH HOH . D 3 HOH A 28 228 24 HOH HOH . D 3 HOH A 29 229 29 HOH HOH . D 3 HOH A 30 230 28 HOH HOH . D 3 HOH A 31 231 22 HOH HOH . D 3 HOH A 32 232 73 HOH HOH . D 3 HOH A 33 233 61 HOH HOH . D 3 HOH A 34 234 88 HOH HOH . D 3 HOH A 35 235 102 HOH HOH . D 3 HOH A 36 236 110 HOH HOH . D 3 HOH A 37 237 100 HOH HOH . D 3 HOH A 38 238 39 HOH HOH . D 3 HOH A 39 239 44 HOH HOH . D 3 HOH A 40 240 41 HOH HOH . D 3 HOH A 41 241 119 HOH HOH . D 3 HOH A 42 242 99 HOH HOH . D 3 HOH A 43 243 62 HOH HOH . D 3 HOH A 44 244 118 HOH HOH . D 3 HOH A 45 245 89 HOH HOH . D 3 HOH A 46 246 46 HOH HOH . D 3 HOH A 47 247 114 HOH HOH . D 3 HOH A 48 248 64 HOH HOH . D 3 HOH A 49 249 63 HOH HOH . D 3 HOH A 50 250 81 HOH HOH . D 3 HOH A 51 251 56 HOH HOH . D 3 HOH A 52 252 48 HOH HOH . D 3 HOH A 53 253 34 HOH HOH . D 3 HOH A 54 254 101 HOH HOH . E 3 HOH B 1 101 86 HOH HOH . E 3 HOH B 2 102 78 HOH HOH . E 3 HOH B 3 103 52 HOH HOH . E 3 HOH B 4 104 12 HOH HOH . E 3 HOH B 5 105 112 HOH HOH . E 3 HOH B 6 106 42 HOH HOH . E 3 HOH B 7 107 72 HOH HOH . E 3 HOH B 8 108 33 HOH HOH . E 3 HOH B 9 109 15 HOH HOH . E 3 HOH B 10 110 55 HOH HOH . E 3 HOH B 11 111 60 HOH HOH . E 3 HOH B 12 112 7 HOH HOH . E 3 HOH B 13 113 80 HOH HOH . E 3 HOH B 14 114 106 HOH HOH . E 3 HOH B 15 115 21 HOH HOH . E 3 HOH B 16 116 116 HOH HOH . E 3 HOH B 17 117 5 HOH HOH . E 3 HOH B 18 118 17 HOH HOH . E 3 HOH B 19 119 18 HOH HOH . E 3 HOH B 20 120 10 HOH HOH . E 3 HOH B 21 121 4 HOH HOH . E 3 HOH B 22 122 40 HOH HOH . E 3 HOH B 23 123 25 HOH HOH . E 3 HOH B 24 124 47 HOH HOH . E 3 HOH B 25 125 16 HOH HOH . E 3 HOH B 26 126 104 HOH HOH . E 3 HOH B 27 127 23 HOH HOH . E 3 HOH B 28 128 9 HOH HOH . E 3 HOH B 29 129 71 HOH HOH . E 3 HOH B 30 130 111 HOH HOH . E 3 HOH B 31 131 13 HOH HOH . E 3 HOH B 32 132 30 HOH HOH . E 3 HOH B 33 133 53 HOH HOH . E 3 HOH B 34 134 67 HOH HOH . E 3 HOH B 35 135 93 HOH HOH . E 3 HOH B 36 136 66 HOH HOH . E 3 HOH B 37 137 31 HOH HOH . E 3 HOH B 38 138 58 HOH HOH . E 3 HOH B 39 139 27 HOH HOH . E 3 HOH B 40 140 57 HOH HOH . E 3 HOH B 41 141 91 HOH HOH . E 3 HOH B 42 142 59 HOH HOH . E 3 HOH B 43 143 115 HOH HOH . E 3 HOH B 44 144 68 HOH HOH . E 3 HOH B 45 145 105 HOH HOH . E 3 HOH B 46 146 51 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.477 _atom_site.Cartn_y 58.996 _atom_site.Cartn_z 49.609 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #