data_6VZH
#
_model_server_result.job_id            HVUIp1WuqhAzIv4paTzFIQ 
_model_server_result.datetime_utc      '2025-03-04 14:49:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vzh 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":403}' 
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_entry.id    6VZH 
#
_exptl.entry_id    6VZH 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VZH 
_cell.length_a            92.158 
_cell.length_b            95.641 
_cell.length_c            192.593 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6VZH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,Q 1 1 
B,G,H,I,J,R 2 1 
C,K,L,S 3 1 
D,M,N,O,P,T 4 1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
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_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             O 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
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_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6VZH 
_atom_sites.fract_transf_matrix[1][1]    0.010851 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010456 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005192 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 401 401 SO4 SO4 . 
F 2 SO4 A 1 402 402 SO4 SO4 . 
G 2 SO4 B 1 401 402 SO4 SO4 . 
H 2 SO4 B 1 402 403 SO4 SO4 . 
I 2 SO4 B 1 403 404 SO4 SO4 . 
J 3 RYA B 1 404 501 RYA DRG . 
K 2 SO4 C 1 401 401 SO4 SO4 . 
L 2 SO4 C 1 402 402 SO4 SO4 . 
M 2 SO4 D 1 401 402 SO4 SO4 . 
N 2 SO4 D 1 402 403 SO4 SO4 . 
O 4 EDO D 1 403 404 EDO EDO . 
P 3 RYA D 1 404 501 RYA DRG . 
Q 5 HOH A 1 501 12 HOH HOH . 
Q 5 HOH A 2 502 24 HOH HOH . 
Q 5 HOH A 3 503 23 HOH HOH . 
Q 5 HOH A 4 504 11 HOH HOH . 
Q 5 HOH A 5 505 18 HOH HOH . 
R 5 HOH B 1 501 16 HOH HOH . 
R 5 HOH B 2 502 21 HOH HOH . 
R 5 HOH B 3 503 14 HOH HOH . 
R 5 HOH B 4 504 22 HOH HOH . 
R 5 HOH B 5 505 26 HOH HOH . 
R 5 HOH B 6 506 17 HOH HOH . 
R 5 HOH B 7 507 9 HOH HOH . 
R 5 HOH B 8 508 2 HOH HOH . 
S 5 HOH C 1 501 25 HOH HOH . 
S 5 HOH C 2 502 29 HOH HOH . 
S 5 HOH C 3 503 15 HOH HOH . 
S 5 HOH C 4 504 27 HOH HOH . 
S 5 HOH C 5 505 28 HOH HOH . 
S 5 HOH C 6 506 32 HOH HOH . 
S 5 HOH C 7 507 6 HOH HOH . 
S 5 HOH C 8 508 33 HOH HOH . 
S 5 HOH C 9 509 30 HOH HOH . 
S 5 HOH C 10 510 10 HOH HOH . 
S 5 HOH C 11 511 5 HOH HOH . 
T 5 HOH D 1 501 3 HOH HOH . 
T 5 HOH D 2 502 19 HOH HOH . 
T 5 HOH D 3 503 4 HOH HOH . 
T 5 HOH D 4 504 13 HOH HOH . 
T 5 HOH D 5 505 31 HOH HOH . 
T 5 HOH D 6 506 1 HOH HOH . 
T 5 HOH D 7 507 8 HOH HOH . 
T 5 HOH D 8 508 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . O 4 -43.855 -15.718 -10.828 1 89.62 ? C1 EDO 403 D 1 
HETATM 2 O O1 EDO . . . O 4 -44.477 -16.882 -10.308 1 87.06 ? O1 EDO 403 D 1 
HETATM 3 C C2 EDO . . . O 4 -43.714 -15.736 -12.31 1 92.39 ? C2 EDO 403 D 1 
HETATM 4 O O2 EDO . . . O 4 -44.875 -16.172 -12.993 1 94.02 ? O2 EDO 403 D 1 
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_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
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