data_6VZK # _model_server_result.job_id MhcYb878BlHvWyHranAWQA _model_server_result.datetime_utc '2025-04-25 19:34:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vzk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6VZK # _exptl.entry_id 6VZK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.158 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-HYDROXYCINNAMIC ACID" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VZK _cell.length_a 48.147 _cell.length_b 56.928 _cell.length_c 97.461 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VZK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H8 O3' _chem_comp.formula_weight 164.158 _chem_comp.id HC4 _chem_comp.mon_nstd_flag . _chem_comp.name "4'-HYDROXYCINNAMIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PARA-COUMARIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HC4 doub 129 n n C1 O2 HC4 sing 130 n n C1 C2 HC4 sing 131 n n O2 HO2 HC4 sing 132 n n C2 C3 HC4 doub 133 e n C2 H2 HC4 sing 134 n n C3 C1' HC4 sing 135 n n C3 H3 HC4 sing 136 n n C1' C2' HC4 doub 137 n y C1' C6' HC4 sing 138 n y C2' C3' HC4 sing 139 n y C2' H2' HC4 sing 140 n n C3' C4' HC4 doub 141 n y C3' H3' HC4 sing 142 n n C4' C5' HC4 sing 143 n y C4' O4' HC4 sing 144 n n C5' C6' HC4 doub 145 n y C5' H5' HC4 sing 146 n n C6' H6' HC4 sing 147 n n O4' HO4' HC4 sing 148 n n # _atom_sites.entry_id 6VZK _atom_sites.fract_transf_matrix[1][1] 0.02077 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017566 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HC4 A 1 301 1 HC4 cou . C 3 HOH A 1 401 4 HOH HOH . C 3 HOH A 2 402 5 HOH HOH . C 3 HOH A 3 403 6 HOH HOH . C 3 HOH A 4 404 3 HOH HOH . C 3 HOH A 5 405 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HC4 . . . B 2 9.085 20.444 12.288 1 37.38 ? C1 HC4 301 A 1 HETATM 2 O O1 HC4 . . . B 2 8.674 20.003 11.206 1 36.92 ? O1 HC4 301 A 1 HETATM 3 O O2 HC4 . . . B 2 8.328 20.279 13.409 1 32.91 ? O2 HC4 301 A 1 HETATM 4 C C2 HC4 . . . B 2 10.428 21.106 12.275 1 37.05 ? C2 HC4 301 A 1 HETATM 5 C C3 HC4 . . . B 2 10.913 21.789 13.331 1 37.41 ? C3 HC4 301 A 1 HETATM 6 C C1' HC4 . . . B 2 12.271 22.426 13.367 1 36.08 ? C1' HC4 301 A 1 HETATM 7 C C2' HC4 . . . B 2 13.097 22.477 12.231 1 35.56 ? C2' HC4 301 A 1 HETATM 8 C C3' HC4 . . . B 2 14.363 23.049 12.296 1 34.21 ? C3' HC4 301 A 1 HETATM 9 C C4' HC4 . . . B 2 14.836 23.526 13.506 1 34.87 ? C4' HC4 301 A 1 HETATM 10 C C5' HC4 . . . B 2 14.039 23.451 14.648 1 32.36 ? C5' HC4 301 A 1 HETATM 11 C C6' HC4 . . . B 2 12.766 22.898 14.586 1 32.13 ? C6' HC4 301 A 1 HETATM 12 O O4' HC4 . . . B 2 16.093 24.053 13.54 1 37.59 ? O4' HC4 301 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #