data_6VZT # _model_server_result.job_id iuTK7UtvQuqclbchOuXQaQ _model_server_result.datetime_utc '2025-03-06 23:31:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vzt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":607}' # _entry.id 6VZT # _exptl.entry_id 6VZT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.283 _cell.angle_gamma 90 _cell.entry_id 6VZT _cell.length_a 58.633 _cell.length_b 75.515 _cell.length_c 115.723 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VZT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,Z 1 1 B,M,N,O,P,Q,R,S,T,U,V,W,X,Y,AA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N ? 5 T N N ? 5 U N N ? 5 V N N ? 5 W N N ? 5 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D O2G ATP . A ATP 601 1_555 L MG MG . A MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc2 D O1B ATP . A ATP 601 1_555 L MG MG . A MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? metalc ? metalc3 D O2A ATP . A ATP 601 1_555 L MG MG . A MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc4 L MG MG . A MG 609 1_555 Z O HOH . A HOH 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc5 L MG MG . A MG 609 1_555 Z O HOH . A HOH 735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc6 L MG MG . A MG 609 1_555 Z O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc7 M O2G ATP . B ATP 601 1_555 Y MG MG . B MG 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc8 M O3B ATP . B ATP 601 1_555 Y MG MG . B MG 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc9 M O2A ATP . B ATP 601 1_555 Y MG MG . B MG 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc10 Y MG MG . B MG 613 1_555 AA O HOH . B HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc11 Y MG MG . B MG 613 1_555 AA O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc12 Y MG MG . B MG 613 1_555 AA O HOH . B HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 352 n n S O2 SO4 doub 353 n n S O3 SO4 sing 354 n n S O4 SO4 sing 355 n n # _atom_sites.entry_id 6VZT _atom_sites.fract_transf_matrix[1][1] 0.017055 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000084 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008641 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ATP A 1 601 501 ATP ATP . E 4 GOL A 1 602 601 GOL GOL . F 4 GOL A 1 603 901 GOL GOL . G 4 GOL A 1 604 1001 GOL GOL . H 4 GOL A 1 605 1101 GOL GOL . I 5 SO4 A 1 606 1 SO4 SO4 . J 5 SO4 A 1 607 2 SO4 SO4 . K 5 SO4 A 1 608 5 SO4 SO4 . L 6 MG A 1 609 1 MG MG . M 3 ATP B 1 601 501 ATP ATP . N 4 GOL B 1 602 601 GOL GOL . O 4 GOL B 1 603 701 GOL GOL . P 4 GOL B 1 604 901 GOL GOL . Q 4 GOL B 1 605 1101 GOL GOL . R 4 GOL B 1 606 1201 GOL GOL . S 4 GOL B 1 607 1401 GOL GOL . T 5 SO4 B 1 608 3 SO4 SO4 . U 5 SO4 B 1 609 4 SO4 SO4 . V 5 SO4 B 1 610 6 SO4 SO4 . W 5 SO4 B 1 611 7 SO4 SO4 . X 5 SO4 B 1 612 8 SO4 SO4 . Y 6 MG B 1 613 2 MG MG . Z 7 HOH A 1 701 122 HOH HOH . Z 7 HOH A 2 702 67 HOH HOH . Z 7 HOH A 3 703 190 HOH HOH . Z 7 HOH A 4 704 162 HOH HOH . Z 7 HOH A 5 705 34 HOH HOH . Z 7 HOH A 6 706 148 HOH HOH . Z 7 HOH A 7 707 102 HOH HOH . Z 7 HOH A 8 708 5 HOH HOH . Z 7 HOH A 9 709 183 HOH HOH . Z 7 HOH A 10 710 163 HOH HOH . Z 7 HOH A 11 711 9 HOH HOH . Z 7 HOH A 12 712 121 HOH HOH . Z 7 HOH A 13 713 180 HOH HOH . Z 7 HOH A 14 714 129 HOH HOH . Z 7 HOH A 15 715 182 HOH HOH . Z 7 HOH A 16 716 177 HOH HOH . Z 7 HOH A 17 717 173 HOH HOH . Z 7 HOH A 18 718 130 HOH HOH . Z 7 HOH A 19 719 12 HOH HOH . Z 7 HOH A 20 720 160 HOH HOH . Z 7 HOH A 21 721 139 HOH HOH . Z 7 HOH A 22 722 124 HOH HOH . Z 7 HOH A 23 723 112 HOH HOH . Z 7 HOH A 24 724 179 HOH HOH . Z 7 HOH A 25 725 57 HOH HOH . Z 7 HOH A 26 726 108 HOH HOH . Z 7 HOH A 27 727 8 HOH HOH . Z 7 HOH A 28 728 14 HOH HOH . Z 7 HOH A 29 729 142 HOH HOH . Z 7 HOH A 30 730 223 HOH HOH . Z 7 HOH A 31 731 10 HOH HOH . Z 7 HOH A 32 732 56 HOH HOH . Z 7 HOH A 33 733 77 HOH HOH . Z 7 HOH A 34 734 120 HOH HOH . Z 7 HOH A 35 735 30 HOH HOH . Z 7 HOH A 36 736 37 HOH HOH . Z 7 HOH A 37 737 109 HOH HOH . Z 7 HOH A 38 738 176 HOH HOH . Z 7 HOH A 39 739 44 HOH HOH . Z 7 HOH A 40 740 215 HOH HOH . Z 7 HOH A 41 741 38 HOH HOH . Z 7 HOH A 42 742 158 HOH HOH . Z 7 HOH A 43 743 210 HOH HOH . Z 7 HOH A 44 744 28 HOH HOH . Z 7 HOH A 45 745 27 HOH HOH . Z 7 HOH A 46 746 159 HOH HOH . Z 7 HOH A 47 747 16 HOH HOH . Z 7 HOH A 48 748 3 HOH HOH . Z 7 HOH A 49 749 191 HOH HOH . Z 7 HOH A 50 750 36 HOH HOH . Z 7 HOH A 51 751 172 HOH HOH . Z 7 HOH A 52 752 15 HOH HOH . Z 7 HOH A 53 753 24 HOH HOH . Z 7 HOH A 54 754 211 HOH HOH . Z 7 HOH A 55 755 207 HOH HOH . Z 7 HOH A 56 756 43 HOH HOH . Z 7 HOH A 57 757 205 HOH HOH . Z 7 HOH A 58 758 86 HOH HOH . Z 7 HOH A 59 759 85 HOH HOH . Z 7 HOH A 60 760 192 HOH HOH . Z 7 HOH A 61 761 206 HOH HOH . Z 7 HOH A 62 762 214 HOH HOH . Z 7 HOH A 63 763 224 HOH HOH . Z 7 HOH A 64 764 227 HOH HOH . Z 7 HOH A 65 765 209 HOH HOH . Z 7 HOH A 66 766 95 HOH HOH . Z 7 HOH A 67 767 186 HOH HOH . Z 7 HOH A 68 768 154 HOH HOH . Z 7 HOH A 69 769 17 HOH HOH . Z 7 HOH A 70 770 166 HOH HOH . Z 7 HOH A 71 771 213 HOH HOH . Z 7 HOH A 72 772 200 HOH HOH . Z 7 HOH A 73 773 100 HOH HOH . Z 7 HOH A 74 774 222 HOH HOH . Z 7 HOH A 75 775 114 HOH HOH . Z 7 HOH A 76 776 123 HOH HOH . Z 7 HOH A 77 777 137 HOH HOH . Z 7 HOH A 78 778 152 HOH HOH . Z 7 HOH A 79 779 187 HOH HOH . Z 7 HOH A 80 780 196 HOH HOH . Z 7 HOH A 81 781 221 HOH HOH . Z 7 HOH A 82 782 165 HOH HOH . AA 7 HOH B 1 701 143 HOH HOH . AA 7 HOH B 2 702 111 HOH HOH . AA 7 HOH B 3 703 204 HOH HOH . AA 7 HOH B 4 704 1 HOH HOH . AA 7 HOH B 5 705 131 HOH HOH . AA 7 HOH B 6 706 82 HOH HOH . AA 7 HOH B 7 707 11 HOH HOH . AA 7 HOH B 8 708 117 HOH HOH . AA 7 HOH B 9 709 126 HOH HOH . AA 7 HOH B 10 710 39 HOH HOH . AA 7 HOH B 11 711 118 HOH HOH . AA 7 HOH B 12 712 74 HOH HOH . AA 7 HOH B 13 713 48 HOH HOH . AA 7 HOH B 14 714 155 HOH HOH . AA 7 HOH B 15 715 140 HOH HOH . AA 7 HOH B 16 716 217 HOH HOH . AA 7 HOH B 17 717 60 HOH HOH . AA 7 HOH B 18 718 225 HOH HOH . AA 7 HOH B 19 719 13 HOH HOH . AA 7 HOH B 20 720 198 HOH HOH . AA 7 HOH B 21 721 26 HOH HOH . AA 7 HOH B 22 722 110 HOH HOH . AA 7 HOH B 23 723 6 HOH HOH . AA 7 HOH B 24 724 195 HOH HOH . AA 7 HOH B 25 725 146 HOH HOH . AA 7 HOH B 26 726 136 HOH HOH . AA 7 HOH B 27 727 147 HOH HOH . AA 7 HOH B 28 728 64 HOH HOH . AA 7 HOH B 29 729 2 HOH HOH . AA 7 HOH B 30 730 72 HOH HOH . AA 7 HOH B 31 731 174 HOH HOH . AA 7 HOH B 32 732 45 HOH HOH . AA 7 HOH B 33 733 54 HOH HOH . AA 7 HOH B 34 734 144 HOH HOH . AA 7 HOH B 35 735 46 HOH HOH . AA 7 HOH B 36 736 218 HOH HOH . AA 7 HOH B 37 737 68 HOH HOH . AA 7 HOH B 38 738 42 HOH HOH . AA 7 HOH B 39 739 219 HOH HOH . AA 7 HOH B 40 740 94 HOH HOH . AA 7 HOH B 41 741 226 HOH HOH . AA 7 HOH B 42 742 31 HOH HOH . AA 7 HOH B 43 743 71 HOH HOH . AA 7 HOH B 44 744 149 HOH HOH . AA 7 HOH B 45 745 151 HOH HOH . AA 7 HOH B 46 746 141 HOH HOH . AA 7 HOH B 47 747 135 HOH HOH . AA 7 HOH B 48 748 197 HOH HOH . AA 7 HOH B 49 749 115 HOH HOH . AA 7 HOH B 50 750 116 HOH HOH . AA 7 HOH B 51 751 169 HOH HOH . AA 7 HOH B 52 752 203 HOH HOH . AA 7 HOH B 53 753 189 HOH HOH . AA 7 HOH B 54 754 216 HOH HOH . AA 7 HOH B 55 755 194 HOH HOH . AA 7 HOH B 56 756 220 HOH HOH . AA 7 HOH B 57 757 168 HOH HOH . AA 7 HOH B 58 758 228 HOH HOH . AA 7 HOH B 59 759 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 5 2.074 -1.525 37.806 1 57 ? S SO4 607 A 1 HETATM 2 O O1 SO4 . . . J 5 2.443 -1.561 36.393 1 67.74 ? O1 SO4 607 A 1 HETATM 3 O O2 SO4 . . . J 5 0.673 -1.907 37.945 1 50.13 ? O2 SO4 607 A 1 HETATM 4 O O3 SO4 . . . J 5 2.934 -2.433 38.558 1 53.58 -1 O3 SO4 607 A 1 HETATM 5 O O4 SO4 . . . J 5 2.244 -0.169 38.322 1 63.68 ? O4 SO4 607 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #