data_6W04
#
_model_server_result.job_id            f-XShOKPpKCPM3KCiKZeAw 
_model_server_result.datetime_utc      '2024-12-26 18:37:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6w04 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6W04 
#
_exptl.entry_id    6W04 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6W04 
_cell.length_a            100.91 
_cell.length_b            100.91 
_cell.length_c            45.24 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6W04 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    'P 6c' 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 7 A ASP 7 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc2 A O ASN 9 A ASN 9 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc3 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc4 B MG MG . A MG 301 1_555 C O1 EDO . A EDO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc5 B MG MG . A MG 301 1_555 E O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc6 B MG MG . A MG 301 1_555 E O HOH . A HOH 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6W04 
_atom_sites.fract_transf_matrix[1][1]    0.00991 
_atom_sites.fract_transf_matrix[1][2]    0.005721 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011443 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022104 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 301 300 MG MG . 
C 3 EDO A 1 302 401 EDO EDO . 
D 4 SO4 A 1 303 501 SO4 SO4 . 
E 5 HOH A 1 401 199 HOH HOH . 
E 5 HOH A 2 402 18 HOH HOH . 
E 5 HOH A 3 403 195 HOH HOH . 
E 5 HOH A 4 404 159 HOH HOH . 
E 5 HOH A 5 405 22 HOH HOH . 
E 5 HOH A 6 406 80 HOH HOH . 
E 5 HOH A 7 407 150 HOH HOH . 
E 5 HOH A 8 408 61 HOH HOH . 
E 5 HOH A 9 409 7 HOH HOH . 
E 5 HOH A 10 410 45 HOH HOH . 
E 5 HOH A 11 411 201 HOH HOH . 
E 5 HOH A 12 412 101 HOH HOH . 
E 5 HOH A 13 413 77 HOH HOH . 
E 5 HOH A 14 414 76 HOH HOH . 
E 5 HOH A 15 415 131 HOH HOH . 
E 5 HOH A 16 416 180 HOH HOH . 
E 5 HOH A 17 417 173 HOH HOH . 
E 5 HOH A 18 418 57 HOH HOH . 
E 5 HOH A 19 419 52 HOH HOH . 
E 5 HOH A 20 420 164 HOH HOH . 
E 5 HOH A 21 421 78 HOH HOH . 
E 5 HOH A 22 422 58 HOH HOH . 
E 5 HOH A 23 423 123 HOH HOH . 
E 5 HOH A 24 424 32 HOH HOH . 
E 5 HOH A 25 425 149 HOH HOH . 
E 5 HOH A 26 426 48 HOH HOH . 
E 5 HOH A 27 427 33 HOH HOH . 
E 5 HOH A 28 428 8 HOH HOH . 
E 5 HOH A 29 429 143 HOH HOH . 
E 5 HOH A 30 430 114 HOH HOH . 
E 5 HOH A 31 431 3 HOH HOH . 
E 5 HOH A 32 432 50 HOH HOH . 
E 5 HOH A 33 433 102 HOH HOH . 
E 5 HOH A 34 434 163 HOH HOH . 
E 5 HOH A 35 435 29 HOH HOH . 
E 5 HOH A 36 436 34 HOH HOH . 
E 5 HOH A 37 437 35 HOH HOH . 
E 5 HOH A 38 438 87 HOH HOH . 
E 5 HOH A 39 439 85 HOH HOH . 
E 5 HOH A 40 440 6 HOH HOH . 
E 5 HOH A 41 441 19 HOH HOH . 
E 5 HOH A 42 442 168 HOH HOH . 
E 5 HOH A 43 443 63 HOH HOH . 
E 5 HOH A 44 444 38 HOH HOH . 
E 5 HOH A 45 445 20 HOH HOH . 
E 5 HOH A 46 446 10 HOH HOH . 
E 5 HOH A 47 447 158 HOH HOH . 
E 5 HOH A 48 448 55 HOH HOH . 
E 5 HOH A 49 449 90 HOH HOH . 
E 5 HOH A 50 450 9 HOH HOH . 
E 5 HOH A 51 451 193 HOH HOH . 
E 5 HOH A 52 452 84 HOH HOH . 
E 5 HOH A 53 453 99 HOH HOH . 
E 5 HOH A 54 454 86 HOH HOH . 
E 5 HOH A 55 455 69 HOH HOH . 
E 5 HOH A 56 456 66 HOH HOH . 
E 5 HOH A 57 457 64 HOH HOH . 
E 5 HOH A 58 458 60 HOH HOH . 
E 5 HOH A 59 459 37 HOH HOH . 
E 5 HOH A 60 460 16 HOH HOH . 
E 5 HOH A 61 461 151 HOH HOH . 
E 5 HOH A 62 462 11 HOH HOH . 
E 5 HOH A 63 463 92 HOH HOH . 
E 5 HOH A 64 464 13 HOH HOH . 
E 5 HOH A 65 465 133 HOH HOH . 
E 5 HOH A 66 466 81 HOH HOH . 
E 5 HOH A 67 467 185 HOH HOH . 
E 5 HOH A 68 468 56 HOH HOH . 
E 5 HOH A 69 469 17 HOH HOH . 
E 5 HOH A 70 470 74 HOH HOH . 
E 5 HOH A 71 471 51 HOH HOH . 
E 5 HOH A 72 472 14 HOH HOH . 
E 5 HOH A 73 473 24 HOH HOH . 
E 5 HOH A 74 474 5 HOH HOH . 
E 5 HOH A 75 475 171 HOH HOH . 
E 5 HOH A 76 476 28 HOH HOH . 
E 5 HOH A 77 477 72 HOH HOH . 
E 5 HOH A 78 478 73 HOH HOH . 
E 5 HOH A 79 479 4 HOH HOH . 
E 5 HOH A 80 480 89 HOH HOH . 
E 5 HOH A 81 481 189 HOH HOH . 
E 5 HOH A 82 482 70 HOH HOH . 
E 5 HOH A 83 483 39 HOH HOH . 
E 5 HOH A 84 484 110 HOH HOH . 
E 5 HOH A 85 485 138 HOH HOH . 
E 5 HOH A 86 486 169 HOH HOH . 
E 5 HOH A 87 487 15 HOH HOH . 
E 5 HOH A 88 488 23 HOH HOH . 
E 5 HOH A 89 489 46 HOH HOH . 
E 5 HOH A 90 490 122 HOH HOH . 
E 5 HOH A 91 491 41 HOH HOH . 
E 5 HOH A 92 492 100 HOH HOH . 
E 5 HOH A 93 493 125 HOH HOH . 
E 5 HOH A 94 494 116 HOH HOH . 
E 5 HOH A 95 495 75 HOH HOH . 
E 5 HOH A 96 496 113 HOH HOH . 
E 5 HOH A 97 497 44 HOH HOH . 
E 5 HOH A 98 498 107 HOH HOH . 
E 5 HOH A 99 499 104 HOH HOH . 
E 5 HOH A 100 500 129 HOH HOH . 
E 5 HOH A 101 501 27 HOH HOH . 
E 5 HOH A 102 502 53 HOH HOH . 
E 5 HOH A 103 503 79 HOH HOH . 
E 5 HOH A 104 504 96 HOH HOH . 
E 5 HOH A 105 505 95 HOH HOH . 
E 5 HOH A 106 506 47 HOH HOH . 
E 5 HOH A 107 507 204 HOH HOH . 
E 5 HOH A 108 508 82 HOH HOH . 
E 5 HOH A 109 509 26 HOH HOH . 
E 5 HOH A 110 510 40 HOH HOH . 
E 5 HOH A 111 511 148 HOH HOH . 
E 5 HOH A 112 512 59 HOH HOH . 
E 5 HOH A 113 513 98 HOH HOH . 
E 5 HOH A 114 514 119 HOH HOH . 
E 5 HOH A 115 515 174 HOH HOH . 
E 5 HOH A 116 516 118 HOH HOH . 
E 5 HOH A 117 517 191 HOH HOH . 
E 5 HOH A 118 518 203 HOH HOH . 
E 5 HOH A 119 519 62 HOH HOH . 
E 5 HOH A 120 520 71 HOH HOH . 
E 5 HOH A 121 521 111 HOH HOH . 
E 5 HOH A 122 522 120 HOH HOH . 
E 5 HOH A 123 523 194 HOH HOH . 
E 5 HOH A 124 524 67 HOH HOH . 
E 5 HOH A 125 525 145 HOH HOH . 
E 5 HOH A 126 526 152 HOH HOH . 
E 5 HOH A 127 527 139 HOH HOH . 
E 5 HOH A 128 528 176 HOH HOH . 
E 5 HOH A 129 529 179 HOH HOH . 
E 5 HOH A 130 530 54 HOH HOH . 
E 5 HOH A 131 531 175 HOH HOH . 
E 5 HOH A 132 532 128 HOH HOH . 
E 5 HOH A 133 533 190 HOH HOH . 
E 5 HOH A 134 534 147 HOH HOH . 
E 5 HOH A 135 535 132 HOH HOH . 
E 5 HOH A 136 536 160 HOH HOH . 
E 5 HOH A 137 537 42 HOH HOH . 
E 5 HOH A 138 538 181 HOH HOH . 
E 5 HOH A 139 539 187 HOH HOH . 
E 5 HOH A 140 540 117 HOH HOH . 
E 5 HOH A 141 541 121 HOH HOH . 
E 5 HOH A 142 542 68 HOH HOH . 
E 5 HOH A 143 543 88 HOH HOH . 
E 5 HOH A 144 544 25 HOH HOH . 
E 5 HOH A 145 545 49 HOH HOH . 
E 5 HOH A 146 546 188 HOH HOH . 
E 5 HOH A 147 547 177 HOH HOH . 
E 5 HOH A 148 548 103 HOH HOH . 
E 5 HOH A 149 549 196 HOH HOH . 
E 5 HOH A 150 550 105 HOH HOH . 
E 5 HOH A 151 551 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 42.601 -10.108 -5.568 1 53.61 ? C1 EDO 302 A 1 
HETATM 2 O O1 EDO . . . C 3 41.397 -9.358 -5.47 1 34.61 ? O1 EDO 302 A 1 
HETATM 3 C C2 EDO . . . C 3 42.699 -10.744 -4.224 1 50.47 ? C2 EDO 302 A 1 
HETATM 4 O O2 EDO . . . C 3 41.344 -11.005 -3.869 1 51.02 ? O2 EDO 302 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           248 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#