data_6W0W # _model_server_result.job_id 6_CDZg4k1RY1ROYm70FxlQ _model_server_result.datetime_utc '2024-12-23 06:48:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6W0W # _exptl.entry_id 6W0W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.316 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(3~{R},4~{S})-3,4-bis(oxidanyl)pyrrolidin-1-yl]-2-[(2~{S},3~{R})-2-methyl-3-oxidanyl-azetidin-1-yl]-4-(trifluoromethyl)pyridine-3-carbonitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W0W _cell.length_a 83.19 _cell.length_b 85.25 _cell.length_c 139.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C15 H17 F3 N4 O3' _chem_comp.formula_weight 358.316 _chem_comp.id RZA _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(3~{R},4~{S})-3,4-bis(oxidanyl)pyrrolidin-1-yl]-2-[(2~{S},3~{R})-2-methyl-3-oxidanyl-azetidin-1-yl]-4-(trifluoromethyl)pyridine-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 RZA sing 277 n n C3 C4 RZA sing 278 n n C3 C2 RZA sing 279 n n C4 N1 RZA sing 280 n n C2 C1 RZA sing 281 n n C2 N1 RZA sing 282 n n N1 C5 RZA sing 283 n n N4 C15 RZA trip 284 n n C5 N2 RZA doub 285 n y C5 C6 RZA sing 286 n y C15 C6 RZA sing 287 n n N2 C9 RZA sing 288 n y C6 C7 RZA doub 289 n y C10 C11 RZA sing 290 n n C10 N3 RZA sing 291 n n C9 N3 RZA sing 292 n n C9 C8 RZA doub 293 n y O2 C11 RZA sing 294 n n C7 C8 RZA sing 295 n y C7 C14 RZA sing 296 n n C11 C12 RZA sing 297 n n N3 C13 RZA sing 298 n n F2 C14 RZA sing 299 n n C14 F3 RZA sing 300 n n C14 F1 RZA sing 301 n n C13 C12 RZA sing 302 n n C12 O1 RZA sing 303 n n C4 H1 RZA sing 304 n n C4 H2 RZA sing 305 n n C13 H3 RZA sing 306 n n C13 H4 RZA sing 307 n n C8 H5 RZA sing 308 n n C1 H6 RZA sing 309 n n C1 H7 RZA sing 310 n n C1 H8 RZA sing 311 n n C2 H9 RZA sing 312 n n C3 H10 RZA sing 313 n n C10 H11 RZA sing 314 n n C10 H12 RZA sing 315 n n C11 H13 RZA sing 316 n n C12 H14 RZA sing 317 n n O1 H15 RZA sing 318 n n O2 H16 RZA sing 319 n n O3 H17 RZA sing 320 n n # _atom_sites.entry_id 6W0W _atom_sites.fract_transf_matrix[1][1] 0.012021 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01173 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00717 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RZA A 1 301 500 RZA PFE . D 3 SO4 A 1 302 2 SO4 SO4 . E 2 RZA B 1 301 500 RZA PFE . F 3 SO4 B 1 302 1 SO4 SO4 . G 3 SO4 B 1 303 3 SO4 SO4 . H 3 SO4 B 1 304 4 SO4 SO4 . I 4 HOH A 1 401 12 HOH HOH . I 4 HOH A 2 402 10 HOH HOH . I 4 HOH A 3 403 4 HOH HOH . I 4 HOH A 4 404 11 HOH HOH . I 4 HOH A 5 405 13 HOH HOH . I 4 HOH A 6 406 5 HOH HOH . I 4 HOH A 7 407 14 HOH HOH . I 4 HOH A 8 408 9 HOH HOH . I 4 HOH A 9 409 16 HOH HOH . I 4 HOH A 10 410 2 HOH HOH . I 4 HOH A 11 411 8 HOH HOH . I 4 HOH A 12 412 6 HOH HOH . I 4 HOH A 13 413 3 HOH HOH . J 4 HOH B 1 401 20 HOH HOH . J 4 HOH B 2 402 36 HOH HOH . J 4 HOH B 3 403 25 HOH HOH . J 4 HOH B 4 404 23 HOH HOH . J 4 HOH B 5 405 26 HOH HOH . J 4 HOH B 6 406 22 HOH HOH . J 4 HOH B 7 407 19 HOH HOH . J 4 HOH B 8 408 24 HOH HOH . J 4 HOH B 9 409 1 HOH HOH . J 4 HOH B 10 410 32 HOH HOH . J 4 HOH B 11 411 28 HOH HOH . J 4 HOH B 12 412 21 HOH HOH . J 4 HOH B 13 413 37 HOH HOH . J 4 HOH B 14 414 35 HOH HOH . J 4 HOH B 15 415 17 HOH HOH . J 4 HOH B 16 416 27 HOH HOH . J 4 HOH B 17 417 34 HOH HOH . J 4 HOH B 18 418 33 HOH HOH . J 4 HOH B 19 419 7 HOH HOH . J 4 HOH B 20 420 18 HOH HOH . J 4 HOH B 21 421 30 HOH HOH . J 4 HOH B 22 422 29 HOH HOH . J 4 HOH B 23 423 15 HOH HOH . J 4 HOH B 24 424 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 RZA . . . C 2 -6.207 0.234 20.301 1 97.17 ? N3 RZA 301 A 1 HETATM 2 C C4 RZA . . . C 2 -2.648 -1.875 15.973 1 75.42 ? C4 RZA 301 A 1 HETATM 3 N N2 RZA . . . C 2 -4.608 -0.461 18.766 1 87.75 ? N2 RZA 301 A 1 HETATM 4 C C7 RZA . . . C 2 -4.093 -2.796 20.162 1 85.44 ? C7 RZA 301 A 1 HETATM 5 C C6 RZA . . . C 2 -3.346 -2.567 18.991 1 81.65 ? C6 RZA 301 A 1 HETATM 6 C C9 RZA . . . C 2 -5.267 -0.712 19.91 1 91.39 ? C9 RZA 301 A 1 HETATM 7 C C13 RZA . . . C 2 -6.897 0.311 21.597 1 100.54 ? C13 RZA 301 A 1 HETATM 8 C C8 RZA . . . C 2 -5.03 -1.882 20.645 1 88.83 ? C8 RZA 301 A 1 HETATM 9 C C1 RZA . . . C 2 -2.907 1.405 16.508 1 75.78 ? C1 RZA 301 A 1 HETATM 10 C C2 RZA . . . C 2 -3.559 0.06 16.214 1 76.05 ? C2 RZA 301 A 1 HETATM 11 C C3 RZA . . . C 2 -3.048 -0.749 15.015 1 74.8 ? C3 RZA 301 A 1 HETATM 12 N N1 RZA . . . C 2 -3.073 -1.022 17.1 1 77.9 ? N1 RZA 301 A 1 HETATM 13 C C5 RZA . . . C 2 -3.699 -1.343 18.314 1 83.12 ? C5 RZA 301 A 1 HETATM 14 C C10 RZA . . . C 2 -6.597 1.347 19.432 1 100.54 ? C10 RZA 301 A 1 HETATM 15 C C11 RZA . . . C 2 -7.585 2.153 20.259 1 103.06 ? C11 RZA 301 A 1 HETATM 16 C C12 RZA . . . C 2 -7.19 1.806 21.681 1 104.98 ? C12 RZA 301 A 1 HETATM 17 O O1 RZA . . . C 2 -8.214 2.144 22.621 1 108.69 ? O1 RZA 301 A 1 HETATM 18 O O2 RZA . . . C 2 -8.925 1.725 20.002 1 102.53 ? O2 RZA 301 A 1 HETATM 19 C C14 RZA . . . C 2 -4.014 -4.119 20.887 1 88.85 ? C14 RZA 301 A 1 HETATM 20 F F1 RZA . . . C 2 -4.398 -4.029 22.158 1 93.16 ? F1 RZA 301 A 1 HETATM 21 F F2 RZA . . . C 2 -4.792 -5.043 20.353 1 84.2 ? F2 RZA 301 A 1 HETATM 22 F F3 RZA . . . C 2 -2.781 -4.634 20.926 1 92.52 ? F3 RZA 301 A 1 HETATM 23 C C15 RZA . . . C 2 -2.257 -3.416 18.594 1 80.36 ? C15 RZA 301 A 1 HETATM 24 N N4 RZA . . . C 2 -1.377 -4.054 18.243 1 80.14 ? N4 RZA 301 A 1 HETATM 25 O O3 RZA . . . C 2 -4.211 -1.129 14.28 1 75.1 ? O3 RZA 301 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 25 #