data_6W29 # _model_server_result.job_id vISciafqkNavo5f17cpqiQ _model_server_result.datetime_utc '2024-11-12 21:17:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w29 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 6W29 # _exptl.entry_id 6W29 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W29 _cell.length_a 73.519 _cell.length_b 73.519 _cell.length_c 233.713 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W29 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 73.519 -73.519 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 103 n n S C1 DMS sing 104 n n S C2 DMS sing 105 n n C1 H11 DMS sing 106 n n C1 H12 DMS sing 107 n n C1 H13 DMS sing 108 n n C2 H21 DMS sing 109 n n C2 H22 DMS sing 110 n n C2 H23 DMS sing 111 n n # _atom_sites.entry_id 6W29 _atom_sites.fract_transf_matrix[1][1] 0.013602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004279 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SEV A 1 601 600 SEV DRG . C 3 CIT A 1 602 701 CIT CIT . D 4 EPE A 1 603 801 EPE EPE . E 5 DMS A 1 604 901 DMS DMS . F 6 HOH A 1 701 28 HOH HOH . F 6 HOH A 2 702 59 HOH HOH . F 6 HOH A 3 703 6 HOH HOH . F 6 HOH A 4 704 17 HOH HOH . F 6 HOH A 5 705 49 HOH HOH . F 6 HOH A 6 706 13 HOH HOH . F 6 HOH A 7 707 20 HOH HOH . F 6 HOH A 8 708 58 HOH HOH . F 6 HOH A 9 709 8 HOH HOH . F 6 HOH A 10 710 67 HOH HOH . F 6 HOH A 11 711 26 HOH HOH . F 6 HOH A 12 712 11 HOH HOH . F 6 HOH A 13 713 30 HOH HOH . F 6 HOH A 14 714 7 HOH HOH . F 6 HOH A 15 715 12 HOH HOH . F 6 HOH A 16 716 66 HOH HOH . F 6 HOH A 17 717 29 HOH HOH . F 6 HOH A 18 718 74 HOH HOH . F 6 HOH A 19 719 2 HOH HOH . F 6 HOH A 20 720 64 HOH HOH . F 6 HOH A 21 721 37 HOH HOH . F 6 HOH A 22 722 24 HOH HOH . F 6 HOH A 23 723 75 HOH HOH . F 6 HOH A 24 724 53 HOH HOH . F 6 HOH A 25 725 9 HOH HOH . F 6 HOH A 26 726 38 HOH HOH . F 6 HOH A 27 727 50 HOH HOH . F 6 HOH A 28 728 36 HOH HOH . F 6 HOH A 29 729 55 HOH HOH . F 6 HOH A 30 730 1 HOH HOH . F 6 HOH A 31 731 46 HOH HOH . F 6 HOH A 32 732 39 HOH HOH . F 6 HOH A 33 733 47 HOH HOH . F 6 HOH A 34 734 19 HOH HOH . F 6 HOH A 35 735 78 HOH HOH . F 6 HOH A 36 736 52 HOH HOH . F 6 HOH A 37 737 34 HOH HOH . F 6 HOH A 38 738 32 HOH HOH . F 6 HOH A 39 739 71 HOH HOH . F 6 HOH A 40 740 77 HOH HOH . F 6 HOH A 41 741 16 HOH HOH . F 6 HOH A 42 742 31 HOH HOH . F 6 HOH A 43 743 44 HOH HOH . F 6 HOH A 44 744 4 HOH HOH . F 6 HOH A 45 745 57 HOH HOH . F 6 HOH A 46 746 60 HOH HOH . F 6 HOH A 47 747 15 HOH HOH . F 6 HOH A 48 748 35 HOH HOH . F 6 HOH A 49 749 21 HOH HOH . F 6 HOH A 50 750 48 HOH HOH . F 6 HOH A 51 751 69 HOH HOH . F 6 HOH A 52 752 25 HOH HOH . F 6 HOH A 53 753 76 HOH HOH . F 6 HOH A 54 754 51 HOH HOH . F 6 HOH A 55 755 42 HOH HOH . F 6 HOH A 56 756 14 HOH HOH . F 6 HOH A 57 757 40 HOH HOH . F 6 HOH A 58 758 62 HOH HOH . F 6 HOH A 59 759 27 HOH HOH . F 6 HOH A 60 760 10 HOH HOH . F 6 HOH A 61 761 5 HOH HOH . F 6 HOH A 62 762 68 HOH HOH . F 6 HOH A 63 763 33 HOH HOH . F 6 HOH A 64 764 70 HOH HOH . F 6 HOH A 65 765 45 HOH HOH . F 6 HOH A 66 766 56 HOH HOH . F 6 HOH A 67 767 73 HOH HOH . F 6 HOH A 68 768 18 HOH HOH . F 6 HOH A 69 769 61 HOH HOH . F 6 HOH A 70 770 65 HOH HOH . F 6 HOH A 71 771 41 HOH HOH . F 6 HOH A 72 772 63 HOH HOH . F 6 HOH A 73 773 3 HOH HOH . F 6 HOH A 74 774 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 5 10.71 -30.112 14.46 1 42.08 ? S DMS 604 A 1 HETATM 2 O O DMS . . . E 5 9.471 -30.008 13.631 1 32.17 ? O DMS 604 A 1 HETATM 3 C C1 DMS . . . E 5 12.148 -30.158 13.411 1 42.37 ? C1 DMS 604 A 1 HETATM 4 C C2 DMS . . . E 5 10.787 -31.825 14.964 1 35.19 ? C2 DMS 604 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #