data_6W30
#
_model_server_result.job_id            GOf3i7a1sV6erL1QfcqwDQ 
_model_server_result.datetime_utc      '2024-11-16 16:03:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6w30 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    6W30 
#
_exptl.entry_id    6W30 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6W30 
_cell.length_a            89.033 
_cell.length_b            89.033 
_cell.length_c            105.559 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6W30 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D MG MG . A MG 503 1_555 E O HOH . A HOH 715 6_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc2 D MG MG . A MG 503 1_555 E O HOH . A HOH 732 6_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc3 D MG MG . A MG 503 1_555 E O HOH . A HOH 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6W30 
_atom_sites.fract_transf_matrix[1][1]    0.011232 
_atom_sites.fract_transf_matrix[1][2]    0.006485 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012969 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009473 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 501 501 GOL GOL . 
C 3 SJA A 1 502 601 SJA LIG . 
D 4 MG A 1 503 701 MG MG . 
E 5 HOH A 1 601 74 HOH HOH . 
E 5 HOH A 2 602 61 HOH HOH . 
E 5 HOH A 3 603 72 HOH HOH . 
E 5 HOH A 4 604 45 HOH HOH . 
E 5 HOH A 5 605 118 HOH HOH . 
E 5 HOH A 6 606 200 HOH HOH . 
E 5 HOH A 7 607 82 HOH HOH . 
E 5 HOH A 8 608 3 HOH HOH . 
E 5 HOH A 9 609 108 HOH HOH . 
E 5 HOH A 10 610 210 HOH HOH . 
E 5 HOH A 11 611 199 HOH HOH . 
E 5 HOH A 12 612 102 HOH HOH . 
E 5 HOH A 13 613 15 HOH HOH . 
E 5 HOH A 14 614 22 HOH HOH . 
E 5 HOH A 15 615 23 HOH HOH . 
E 5 HOH A 16 616 163 HOH HOH . 
E 5 HOH A 17 617 11 HOH HOH . 
E 5 HOH A 18 618 17 HOH HOH . 
E 5 HOH A 19 619 33 HOH HOH . 
E 5 HOH A 20 620 53 HOH HOH . 
E 5 HOH A 21 621 216 HOH HOH . 
E 5 HOH A 22 622 18 HOH HOH . 
E 5 HOH A 23 623 10 HOH HOH . 
E 5 HOH A 24 624 203 HOH HOH . 
E 5 HOH A 25 625 95 HOH HOH . 
E 5 HOH A 26 626 31 HOH HOH . 
E 5 HOH A 27 627 7 HOH HOH . 
E 5 HOH A 28 628 73 HOH HOH . 
E 5 HOH A 29 629 8 HOH HOH . 
E 5 HOH A 30 630 79 HOH HOH . 
E 5 HOH A 31 631 29 HOH HOH . 
E 5 HOH A 32 632 26 HOH HOH . 
E 5 HOH A 33 633 2 HOH HOH . 
E 5 HOH A 34 634 155 HOH HOH . 
E 5 HOH A 35 635 4 HOH HOH . 
E 5 HOH A 36 636 75 HOH HOH . 
E 5 HOH A 37 637 100 HOH HOH . 
E 5 HOH A 38 638 13 HOH HOH . 
E 5 HOH A 39 639 51 HOH HOH . 
E 5 HOH A 40 640 94 HOH HOH . 
E 5 HOH A 41 641 117 HOH HOH . 
E 5 HOH A 42 642 27 HOH HOH . 
E 5 HOH A 43 643 30 HOH HOH . 
E 5 HOH A 44 644 66 HOH HOH . 
E 5 HOH A 45 645 123 HOH HOH . 
E 5 HOH A 46 646 91 HOH HOH . 
E 5 HOH A 47 647 32 HOH HOH . 
E 5 HOH A 48 648 83 HOH HOH . 
E 5 HOH A 49 649 12 HOH HOH . 
E 5 HOH A 50 650 49 HOH HOH . 
E 5 HOH A 51 651 6 HOH HOH . 
E 5 HOH A 52 652 50 HOH HOH . 
E 5 HOH A 53 653 5 HOH HOH . 
E 5 HOH A 54 654 168 HOH HOH . 
E 5 HOH A 55 655 14 HOH HOH . 
E 5 HOH A 56 656 19 HOH HOH . 
E 5 HOH A 57 657 35 HOH HOH . 
E 5 HOH A 58 658 20 HOH HOH . 
E 5 HOH A 59 659 21 HOH HOH . 
E 5 HOH A 60 660 62 HOH HOH . 
E 5 HOH A 61 661 55 HOH HOH . 
E 5 HOH A 62 662 64 HOH HOH . 
E 5 HOH A 63 663 153 HOH HOH . 
E 5 HOH A 64 664 68 HOH HOH . 
E 5 HOH A 65 665 40 HOH HOH . 
E 5 HOH A 66 666 1 HOH HOH . 
E 5 HOH A 67 667 110 HOH HOH . 
E 5 HOH A 68 668 36 HOH HOH . 
E 5 HOH A 69 669 116 HOH HOH . 
E 5 HOH A 70 670 43 HOH HOH . 
E 5 HOH A 71 671 85 HOH HOH . 
E 5 HOH A 72 672 52 HOH HOH . 
E 5 HOH A 73 673 103 HOH HOH . 
E 5 HOH A 74 674 71 HOH HOH . 
E 5 HOH A 75 675 198 HOH HOH . 
E 5 HOH A 76 676 148 HOH HOH . 
E 5 HOH A 77 677 120 HOH HOH . 
E 5 HOH A 78 678 76 HOH HOH . 
E 5 HOH A 79 679 65 HOH HOH . 
E 5 HOH A 80 680 124 HOH HOH . 
E 5 HOH A 81 681 16 HOH HOH . 
E 5 HOH A 82 682 92 HOH HOH . 
E 5 HOH A 83 683 46 HOH HOH . 
E 5 HOH A 84 684 184 HOH HOH . 
E 5 HOH A 85 685 24 HOH HOH . 
E 5 HOH A 86 686 146 HOH HOH . 
E 5 HOH A 87 687 104 HOH HOH . 
E 5 HOH A 88 688 9 HOH HOH . 
E 5 HOH A 89 689 84 HOH HOH . 
E 5 HOH A 90 690 47 HOH HOH . 
E 5 HOH A 91 691 54 HOH HOH . 
E 5 HOH A 92 692 86 HOH HOH . 
E 5 HOH A 93 693 169 HOH HOH . 
E 5 HOH A 94 694 115 HOH HOH . 
E 5 HOH A 95 695 42 HOH HOH . 
E 5 HOH A 96 696 34 HOH HOH . 
E 5 HOH A 97 697 129 HOH HOH . 
E 5 HOH A 98 698 48 HOH HOH . 
E 5 HOH A 99 699 63 HOH HOH . 
E 5 HOH A 100 700 97 HOH HOH . 
E 5 HOH A 101 701 56 HOH HOH . 
E 5 HOH A 102 702 214 HOH HOH . 
E 5 HOH A 103 703 170 HOH HOH . 
E 5 HOH A 104 704 57 HOH HOH . 
E 5 HOH A 105 705 179 HOH HOH . 
E 5 HOH A 106 706 88 HOH HOH . 
E 5 HOH A 107 707 106 HOH HOH . 
E 5 HOH A 108 708 37 HOH HOH . 
E 5 HOH A 109 709 58 HOH HOH . 
E 5 HOH A 110 710 189 HOH HOH . 
E 5 HOH A 111 711 93 HOH HOH . 
E 5 HOH A 112 712 90 HOH HOH . 
E 5 HOH A 113 713 44 HOH HOH . 
E 5 HOH A 114 714 166 HOH HOH . 
E 5 HOH A 115 715 133 HOH HOH . 
E 5 HOH A 116 716 41 HOH HOH . 
E 5 HOH A 117 717 175 HOH HOH . 
E 5 HOH A 118 718 194 HOH HOH . 
E 5 HOH A 119 719 132 HOH HOH . 
E 5 HOH A 120 720 211 HOH HOH . 
E 5 HOH A 121 721 114 HOH HOH . 
E 5 HOH A 122 722 60 HOH HOH . 
E 5 HOH A 123 723 173 HOH HOH . 
E 5 HOH A 124 724 165 HOH HOH . 
E 5 HOH A 125 725 59 HOH HOH . 
E 5 HOH A 126 726 98 HOH HOH . 
E 5 HOH A 127 727 39 HOH HOH . 
E 5 HOH A 128 728 213 HOH HOH . 
E 5 HOH A 129 729 99 HOH HOH . 
E 5 HOH A 130 730 136 HOH HOH . 
E 5 HOH A 131 731 80 HOH HOH . 
E 5 HOH A 132 732 196 HOH HOH . 
E 5 HOH A 133 733 158 HOH HOH . 
E 5 HOH A 134 734 138 HOH HOH . 
E 5 HOH A 135 735 25 HOH HOH . 
E 5 HOH A 136 736 78 HOH HOH . 
E 5 HOH A 137 737 89 HOH HOH . 
E 5 HOH A 138 738 204 HOH HOH . 
E 5 HOH A 139 739 187 HOH HOH . 
E 5 HOH A 140 740 70 HOH HOH . 
E 5 HOH A 141 741 197 HOH HOH . 
E 5 HOH A 142 742 176 HOH HOH . 
E 5 HOH A 143 743 119 HOH HOH . 
E 5 HOH A 144 744 156 HOH HOH . 
E 5 HOH A 145 745 171 HOH HOH . 
E 5 HOH A 146 746 195 HOH HOH . 
E 5 HOH A 147 747 202 HOH HOH . 
E 5 HOH A 148 748 122 HOH HOH . 
E 5 HOH A 149 749 87 HOH HOH . 
E 5 HOH A 150 750 81 HOH HOH . 
E 5 HOH A 151 751 143 HOH HOH . 
E 5 HOH A 152 752 207 HOH HOH . 
E 5 HOH A 153 753 159 HOH HOH . 
E 5 HOH A 154 754 212 HOH HOH . 
E 5 HOH A 155 755 38 HOH HOH . 
E 5 HOH A 156 756 206 HOH HOH . 
E 5 HOH A 157 757 205 HOH HOH . 
E 5 HOH A 158 758 209 HOH HOH . 
E 5 HOH A 159 759 101 HOH HOH . 
E 5 HOH A 160 760 150 HOH HOH . 
E 5 HOH A 161 761 77 HOH HOH . 
E 5 HOH A 162 762 208 HOH HOH . 
E 5 HOH A 163 763 178 HOH HOH . 
E 5 HOH A 164 764 109 HOH HOH . 
E 5 HOH A 165 765 67 HOH HOH . 
E 5 HOH A 166 766 188 HOH HOH . 
E 5 HOH A 167 767 96 HOH HOH . 
E 5 HOH A 168 768 107 HOH HOH . 
E 5 HOH A 169 769 191 HOH HOH . 
E 5 HOH A 170 770 142 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 46.602 2.149 21.945 1 70.84 ? C1 GOL 501 A 1 
HETATM 2 O O1 GOL . . . B 2 46.775 2.834 20.755 1 45.42 ? O1 GOL 501 A 1 
HETATM 3 C C2 GOL . . . B 2 45.282 2.632 22.529 1 57.54 ? C2 GOL 501 A 1 
HETATM 4 O O2 GOL . . . B 2 44.289 2.707 21.558 1 53.34 ? O2 GOL 501 A 1 
HETATM 5 C C3 GOL . . . B 2 44.958 1.572 23.568 1 64.15 ? C3 GOL 501 A 1 
HETATM 6 O O3 GOL . . . B 2 43.909 2.076 24.315 1 67.6 ? O3 GOL 501 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#