data_6W34 # _model_server_result.job_id duaRj3N_G3Jx_KVX-xz1lw _model_server_result.datetime_utc '2024-11-10 01:26:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w34 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 6W34 # _exptl.entry_id 6W34 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 94.945 _cell.angle_beta 91.382 _cell.angle_gamma 92.794 _cell.entry_id 6W34 _cell.length_a 42.809 _cell.length_b 43.835 _cell.length_c 68.612 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W34 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6W34 _atom_sites.fract_transf_matrix[1][1] 0.02336 _atom_sites.fract_transf_matrix[1][2] 0.00114 _atom_sites.fract_transf_matrix[1][3] 0.000666 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02284 _atom_sites.fract_transf_matrix[2][3] 0.002006 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 351 SO4 SO4 . D 3 CL A 1 402 352 CL CL . E 4 EDO A 1 403 353 EDO EDO . F 4 EDO A 1 404 354 EDO EDO . G 4 EDO A 1 405 355 EDO EDO . H 2 SO4 B 1 401 351 SO4 SO4 . I 4 EDO B 1 402 352 EDO EDO . J 5 HOH A 1 501 324 HOH HOH . J 5 HOH A 2 502 281 HOH HOH . J 5 HOH A 3 503 188 HOH HOH . J 5 HOH A 4 504 256 HOH HOH . J 5 HOH A 5 505 346 HOH HOH . J 5 HOH A 6 506 82 HOH HOH . J 5 HOH A 7 507 16 HOH HOH . J 5 HOH A 8 508 174 HOH HOH . J 5 HOH A 9 509 283 HOH HOH . J 5 HOH A 10 510 307 HOH HOH . J 5 HOH A 11 511 182 HOH HOH . J 5 HOH A 12 512 197 HOH HOH . J 5 HOH A 13 513 328 HOH HOH . J 5 HOH A 14 514 237 HOH HOH . J 5 HOH A 15 515 216 HOH HOH . J 5 HOH A 16 516 330 HOH HOH . J 5 HOH A 17 517 176 HOH HOH . J 5 HOH A 18 518 261 HOH HOH . J 5 HOH A 19 519 171 HOH HOH . J 5 HOH A 20 520 160 HOH HOH . J 5 HOH A 21 521 294 HOH HOH . J 5 HOH A 22 522 13 HOH HOH . J 5 HOH A 23 523 191 HOH HOH . J 5 HOH A 24 524 64 HOH HOH . J 5 HOH A 25 525 39 HOH HOH . J 5 HOH A 26 526 144 HOH HOH . J 5 HOH A 27 527 276 HOH HOH . J 5 HOH A 28 528 282 HOH HOH . J 5 HOH A 29 529 42 HOH HOH . J 5 HOH A 30 530 269 HOH HOH . J 5 HOH A 31 531 95 HOH HOH . J 5 HOH A 32 532 23 HOH HOH . J 5 HOH A 33 533 10 HOH HOH . J 5 HOH A 34 534 46 HOH HOH . J 5 HOH A 35 535 159 HOH HOH . J 5 HOH A 36 536 17 HOH HOH . J 5 HOH A 37 537 114 HOH HOH . J 5 HOH A 38 538 297 HOH HOH . J 5 HOH A 39 539 151 HOH HOH . J 5 HOH A 40 540 28 HOH HOH . J 5 HOH A 41 541 72 HOH HOH . J 5 HOH A 42 542 326 HOH HOH . J 5 HOH A 43 543 106 HOH HOH . J 5 HOH A 44 544 9 HOH HOH . J 5 HOH A 45 545 40 HOH HOH . J 5 HOH A 46 546 96 HOH HOH . J 5 HOH A 47 547 172 HOH HOH . J 5 HOH A 48 548 105 HOH HOH . J 5 HOH A 49 549 22 HOH HOH . J 5 HOH A 50 550 38 HOH HOH . J 5 HOH A 51 551 238 HOH HOH . J 5 HOH A 52 552 271 HOH HOH . J 5 HOH A 53 553 91 HOH HOH . J 5 HOH A 54 554 284 HOH HOH . J 5 HOH A 55 555 248 HOH HOH . J 5 HOH A 56 556 245 HOH HOH . J 5 HOH A 57 557 88 HOH HOH . J 5 HOH A 58 558 212 HOH HOH . J 5 HOH A 59 559 118 HOH HOH . J 5 HOH A 60 560 35 HOH HOH . J 5 HOH A 61 561 285 HOH HOH . J 5 HOH A 62 562 100 HOH HOH . J 5 HOH A 63 563 167 HOH HOH . J 5 HOH A 64 564 125 HOH HOH . J 5 HOH A 65 565 204 HOH HOH . J 5 HOH A 66 566 62 HOH HOH . J 5 HOH A 67 567 166 HOH HOH . J 5 HOH A 68 568 56 HOH HOH . J 5 HOH A 69 569 337 HOH HOH . J 5 HOH A 70 570 7 HOH HOH . J 5 HOH A 71 571 128 HOH HOH . J 5 HOH A 72 572 158 HOH HOH . J 5 HOH A 73 573 14 HOH HOH . J 5 HOH A 74 574 34 HOH HOH . J 5 HOH A 75 575 258 HOH HOH . J 5 HOH A 76 576 205 HOH HOH . J 5 HOH A 77 577 11 HOH HOH . J 5 HOH A 78 578 318 HOH HOH . J 5 HOH A 79 579 287 HOH HOH . J 5 HOH A 80 580 24 HOH HOH . J 5 HOH A 81 581 207 HOH HOH . J 5 HOH A 82 582 325 HOH HOH . J 5 HOH A 83 583 61 HOH HOH . J 5 HOH A 84 584 99 HOH HOH . J 5 HOH A 85 585 67 HOH HOH . J 5 HOH A 86 586 8 HOH HOH . J 5 HOH A 87 587 26 HOH HOH . J 5 HOH A 88 588 293 HOH HOH . J 5 HOH A 89 589 200 HOH HOH . J 5 HOH A 90 590 255 HOH HOH . J 5 HOH A 91 591 109 HOH HOH . J 5 HOH A 92 592 246 HOH HOH . J 5 HOH A 93 593 259 HOH HOH . J 5 HOH A 94 594 97 HOH HOH . J 5 HOH A 95 595 187 HOH HOH . J 5 HOH A 96 596 202 HOH HOH . J 5 HOH A 97 597 189 HOH HOH . J 5 HOH A 98 598 50 HOH HOH . J 5 HOH A 99 599 41 HOH HOH . J 5 HOH A 100 600 264 HOH HOH . J 5 HOH A 101 601 130 HOH HOH . J 5 HOH A 102 602 31 HOH HOH . J 5 HOH A 103 603 107 HOH HOH . J 5 HOH A 104 604 234 HOH HOH . J 5 HOH A 105 605 332 HOH HOH . J 5 HOH A 106 606 253 HOH HOH . J 5 HOH A 107 607 63 HOH HOH . J 5 HOH A 108 608 85 HOH HOH . J 5 HOH A 109 609 15 HOH HOH . J 5 HOH A 110 610 292 HOH HOH . J 5 HOH A 111 611 45 HOH HOH . J 5 HOH A 112 612 127 HOH HOH . J 5 HOH A 113 613 133 HOH HOH . J 5 HOH A 114 614 48 HOH HOH . J 5 HOH A 115 615 193 HOH HOH . J 5 HOH A 116 616 268 HOH HOH . J 5 HOH A 117 617 316 HOH HOH . J 5 HOH A 118 618 135 HOH HOH . J 5 HOH A 119 619 280 HOH HOH . J 5 HOH A 120 620 44 HOH HOH . J 5 HOH A 121 621 65 HOH HOH . J 5 HOH A 122 622 279 HOH HOH . J 5 HOH A 123 623 93 HOH HOH . J 5 HOH A 124 624 153 HOH HOH . J 5 HOH A 125 625 302 HOH HOH . J 5 HOH A 126 626 75 HOH HOH . J 5 HOH A 127 627 76 HOH HOH . J 5 HOH A 128 628 277 HOH HOH . J 5 HOH A 129 629 43 HOH HOH . J 5 HOH A 130 630 81 HOH HOH . J 5 HOH A 131 631 152 HOH HOH . J 5 HOH A 132 632 236 HOH HOH . J 5 HOH A 133 633 60 HOH HOH . J 5 HOH A 134 634 186 HOH HOH . J 5 HOH A 135 635 108 HOH HOH . J 5 HOH A 136 636 163 HOH HOH . J 5 HOH A 137 637 52 HOH HOH . J 5 HOH A 138 638 247 HOH HOH . J 5 HOH A 139 639 131 HOH HOH . J 5 HOH A 140 640 173 HOH HOH . J 5 HOH A 141 641 123 HOH HOH . J 5 HOH A 142 642 79 HOH HOH . J 5 HOH A 143 643 249 HOH HOH . J 5 HOH A 144 644 263 HOH HOH . J 5 HOH A 145 645 142 HOH HOH . J 5 HOH A 146 646 288 HOH HOH . J 5 HOH A 147 647 267 HOH HOH . J 5 HOH A 148 648 84 HOH HOH . J 5 HOH A 149 649 3 HOH HOH . J 5 HOH A 150 650 199 HOH HOH . J 5 HOH A 151 651 137 HOH HOH . J 5 HOH A 152 652 29 HOH HOH . J 5 HOH A 153 653 164 HOH HOH . J 5 HOH A 154 654 254 HOH HOH . J 5 HOH A 155 655 315 HOH HOH . J 5 HOH A 156 656 68 HOH HOH . J 5 HOH A 157 657 312 HOH HOH . J 5 HOH A 158 658 336 HOH HOH . J 5 HOH A 159 659 66 HOH HOH . J 5 HOH A 160 660 286 HOH HOH . J 5 HOH A 161 661 195 HOH HOH . J 5 HOH A 162 662 198 HOH HOH . J 5 HOH A 163 663 333 HOH HOH . J 5 HOH A 164 664 260 HOH HOH . J 5 HOH A 165 665 80 HOH HOH . J 5 HOH A 166 666 51 HOH HOH . J 5 HOH A 167 667 201 HOH HOH . J 5 HOH A 168 668 329 HOH HOH . J 5 HOH A 169 669 224 HOH HOH . J 5 HOH A 170 670 252 HOH HOH . J 5 HOH A 171 671 219 HOH HOH . J 5 HOH A 172 672 59 HOH HOH . J 5 HOH A 173 673 250 HOH HOH . J 5 HOH A 174 674 291 HOH HOH . J 5 HOH A 175 675 89 HOH HOH . J 5 HOH A 176 676 313 HOH HOH . J 5 HOH A 177 677 290 HOH HOH . J 5 HOH A 178 678 217 HOH HOH . J 5 HOH A 179 679 185 HOH HOH . J 5 HOH A 180 680 251 HOH HOH . J 5 HOH A 181 681 196 HOH HOH . J 5 HOH A 182 682 49 HOH HOH . J 5 HOH A 183 683 322 HOH HOH . J 5 HOH A 184 684 240 HOH HOH . J 5 HOH A 185 685 90 HOH HOH . J 5 HOH A 186 686 235 HOH HOH . J 5 HOH A 187 687 222 HOH HOH . J 5 HOH A 188 688 143 HOH HOH . J 5 HOH A 189 689 257 HOH HOH . K 5 HOH B 1 501 228 HOH HOH . K 5 HOH B 2 502 321 HOH HOH . K 5 HOH B 3 503 317 HOH HOH . K 5 HOH B 4 504 300 HOH HOH . K 5 HOH B 5 505 19 HOH HOH . K 5 HOH B 6 506 347 HOH HOH . K 5 HOH B 7 507 25 HOH HOH . K 5 HOH B 8 508 273 HOH HOH . K 5 HOH B 9 509 87 HOH HOH . K 5 HOH B 10 510 320 HOH HOH . K 5 HOH B 11 511 6 HOH HOH . K 5 HOH B 12 512 334 HOH HOH . K 5 HOH B 13 513 74 HOH HOH . K 5 HOH B 14 514 27 HOH HOH . K 5 HOH B 15 515 70 HOH HOH . K 5 HOH B 16 516 112 HOH HOH . K 5 HOH B 17 517 71 HOH HOH . K 5 HOH B 18 518 340 HOH HOH . K 5 HOH B 19 519 343 HOH HOH . K 5 HOH B 20 520 145 HOH HOH . K 5 HOH B 21 521 230 HOH HOH . K 5 HOH B 22 522 155 HOH HOH . K 5 HOH B 23 523 331 HOH HOH . K 5 HOH B 24 524 210 HOH HOH . K 5 HOH B 25 525 110 HOH HOH . K 5 HOH B 26 526 86 HOH HOH . K 5 HOH B 27 527 208 HOH HOH . K 5 HOH B 28 528 298 HOH HOH . K 5 HOH B 29 529 203 HOH HOH . K 5 HOH B 30 530 262 HOH HOH . K 5 HOH B 31 531 115 HOH HOH . K 5 HOH B 32 532 92 HOH HOH . K 5 HOH B 33 533 146 HOH HOH . K 5 HOH B 34 534 278 HOH HOH . K 5 HOH B 35 535 101 HOH HOH . K 5 HOH B 36 536 119 HOH HOH . K 5 HOH B 37 537 132 HOH HOH . K 5 HOH B 38 538 126 HOH HOH . K 5 HOH B 39 539 265 HOH HOH . K 5 HOH B 40 540 233 HOH HOH . K 5 HOH B 41 541 33 HOH HOH . K 5 HOH B 42 542 83 HOH HOH . K 5 HOH B 43 543 296 HOH HOH . K 5 HOH B 44 544 301 HOH HOH . K 5 HOH B 45 545 177 HOH HOH . K 5 HOH B 46 546 5 HOH HOH . K 5 HOH B 47 547 338 HOH HOH . K 5 HOH B 48 548 206 HOH HOH . K 5 HOH B 49 549 289 HOH HOH . K 5 HOH B 50 550 18 HOH HOH . K 5 HOH B 51 551 213 HOH HOH . K 5 HOH B 52 552 124 HOH HOH . K 5 HOH B 53 553 241 HOH HOH . K 5 HOH B 54 554 190 HOH HOH . K 5 HOH B 55 555 309 HOH HOH . K 5 HOH B 56 556 117 HOH HOH . K 5 HOH B 57 557 168 HOH HOH . K 5 HOH B 58 558 306 HOH HOH . K 5 HOH B 59 559 69 HOH HOH . K 5 HOH B 60 560 232 HOH HOH . K 5 HOH B 61 561 55 HOH HOH . K 5 HOH B 62 562 36 HOH HOH . K 5 HOH B 63 563 136 HOH HOH . K 5 HOH B 64 564 342 HOH HOH . K 5 HOH B 65 565 54 HOH HOH . K 5 HOH B 66 566 272 HOH HOH . K 5 HOH B 67 567 242 HOH HOH . K 5 HOH B 68 568 239 HOH HOH . K 5 HOH B 69 569 339 HOH HOH . K 5 HOH B 70 570 275 HOH HOH . K 5 HOH B 71 571 77 HOH HOH . K 5 HOH B 72 572 104 HOH HOH . K 5 HOH B 73 573 129 HOH HOH . K 5 HOH B 74 574 305 HOH HOH . K 5 HOH B 75 575 141 HOH HOH . K 5 HOH B 76 576 94 HOH HOH . K 5 HOH B 77 577 111 HOH HOH . K 5 HOH B 78 578 140 HOH HOH . K 5 HOH B 79 579 116 HOH HOH . K 5 HOH B 80 580 138 HOH HOH . K 5 HOH B 81 581 121 HOH HOH . K 5 HOH B 82 582 310 HOH HOH . K 5 HOH B 83 583 180 HOH HOH . K 5 HOH B 84 584 299 HOH HOH . K 5 HOH B 85 585 243 HOH HOH . K 5 HOH B 86 586 211 HOH HOH . K 5 HOH B 87 587 270 HOH HOH . K 5 HOH B 88 588 98 HOH HOH . K 5 HOH B 89 589 161 HOH HOH . K 5 HOH B 90 590 20 HOH HOH . K 5 HOH B 91 591 194 HOH HOH . K 5 HOH B 92 592 37 HOH HOH . K 5 HOH B 93 593 73 HOH HOH . K 5 HOH B 94 594 58 HOH HOH . K 5 HOH B 95 595 12 HOH HOH . K 5 HOH B 96 596 311 HOH HOH . K 5 HOH B 97 597 304 HOH HOH . K 5 HOH B 98 598 349 HOH HOH . K 5 HOH B 99 599 102 HOH HOH . K 5 HOH B 100 600 215 HOH HOH . K 5 HOH B 101 601 335 HOH HOH . K 5 HOH B 102 602 57 HOH HOH . K 5 HOH B 103 603 225 HOH HOH . K 5 HOH B 104 604 103 HOH HOH . K 5 HOH B 105 605 344 HOH HOH . K 5 HOH B 106 606 165 HOH HOH . K 5 HOH B 107 607 149 HOH HOH . K 5 HOH B 108 608 122 HOH HOH . K 5 HOH B 109 609 227 HOH HOH . K 5 HOH B 110 610 323 HOH HOH . K 5 HOH B 111 611 345 HOH HOH . K 5 HOH B 112 612 113 HOH HOH . K 5 HOH B 113 613 157 HOH HOH . K 5 HOH B 114 614 314 HOH HOH . K 5 HOH B 115 615 223 HOH HOH . K 5 HOH B 116 616 348 HOH HOH . K 5 HOH B 117 617 170 HOH HOH . K 5 HOH B 118 618 32 HOH HOH . K 5 HOH B 119 619 221 HOH HOH . K 5 HOH B 120 620 327 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 17.977 34.597 0.688 1 41.99 ? C1 EDO 404 A 1 HETATM 2 O O1 EDO . . . F 4 18.064 34.53 2.116 1 45.5 ? O1 EDO 404 A 1 HETATM 3 C C2 EDO . . . F 4 19.348 34.906 0.097 1 34.66 ? C2 EDO 404 A 1 HETATM 4 O O2 EDO . . . F 4 20.3 33.85 0.37 1 34.43 ? O2 EDO 404 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #