data_6W3K # _model_server_result.job_id sXsZ9mqLXZTVSCqa7sVrEw _model_server_result.datetime_utc '2024-11-09 23:17:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w3k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 6W3K # _exptl.entry_id 6W3K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 424.403 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[5-[2,6-bis(fluoranyl)phenyl]-2~{H}-pyrazolo[3,4-b]pyridin-3-yl]-2-(4-oxidanylpiperidin-1-yl)-1~{H}-pyrimidin-6-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 119.58 _cell.angle_gamma 90 _cell.entry_id 6W3K _cell.length_a 73.513 _cell.length_b 112.761 _cell.length_c 67.892 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W3K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1,y,-z-1 -1 0 0 0 1 0 0 0 -1 -39.998907 0 -59.043452 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H18 F2 N6 O2' _chem_comp.formula_weight 424.403 _chem_comp.id SJS _chem_comp.mon_nstd_flag . _chem_comp.name 4-[5-[2,6-bis(fluoranyl)phenyl]-2~{H}-pyrazolo[3,4-b]pyridin-3-yl]-2-(4-oxidanylpiperidin-1-yl)-1~{H}-pyrimidin-6-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N13 C15 SJS doub 290 n y N13 N12 SJS sing 291 n y N16 C15 SJS sing 292 n y N16 C17 SJS doub 293 n y C15 C10 SJS sing 294 n y N12 C11 SJS sing 295 n y C17 C8 SJS sing 296 n y C10 C11 SJS doub 297 n y C10 C9 SJS sing 298 n y C11 C18 SJS sing 299 n n F33 C3 SJS sing 300 n n C8 C9 SJS doub 301 n y C8 C4 SJS sing 302 n n C19 C18 SJS doub 303 n n C19 C20 SJS sing 304 n n C18 N25 SJS sing 305 n n C3 C4 SJS doub 306 n y C3 C2 SJS sing 307 n y C4 C5 SJS sing 308 n y O21 C20 SJS doub 309 n n C20 N22 SJS sing 310 n n C2 C1 SJS doub 311 n y N25 C24 SJS doub 312 n n C5 F7 SJS sing 313 n n C5 C6 SJS doub 314 n y N22 C24 SJS sing 315 n n C24 N26 SJS sing 316 n n C1 C6 SJS sing 317 n y N26 C31 SJS sing 318 n n N26 C27 SJS sing 319 n n C31 C30 SJS sing 320 n n C30 C29 SJS sing 321 n n C27 C28 SJS sing 322 n n C28 C29 SJS sing 323 n n C29 O32 SJS sing 324 n n C6 H1 SJS sing 325 n n N12 H2 SJS sing 326 n n C17 H3 SJS sing 327 n n C28 H4 SJS sing 328 n n C28 H5 SJS sing 329 n n C1 H6 SJS sing 330 n n C19 H7 SJS sing 331 n n C2 H8 SJS sing 332 n n C27 H9 SJS sing 333 n n C27 H10 SJS sing 334 n n C29 H11 SJS sing 335 n n C30 H12 SJS sing 336 n n C30 H13 SJS sing 337 n n C31 H14 SJS sing 338 n n C31 H15 SJS sing 339 n n C9 H16 SJS sing 340 n n N22 H17 SJS sing 341 n n O32 H18 SJS sing 342 n n # _atom_sites.entry_id 6W3K _atom_sites.fract_transf_matrix[1][1] 0.013603 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007722 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SJS A 1 1001 1 SJS LIG . C 3 HOH A 1 1101 98 HOH HOH . C 3 HOH A 2 1102 180 HOH HOH . C 3 HOH A 3 1103 193 HOH HOH . C 3 HOH A 4 1104 31 HOH HOH . C 3 HOH A 5 1105 181 HOH HOH . C 3 HOH A 6 1106 60 HOH HOH . C 3 HOH A 7 1107 17 HOH HOH . C 3 HOH A 8 1108 67 HOH HOH . C 3 HOH A 9 1109 7 HOH HOH . C 3 HOH A 10 1110 32 HOH HOH . C 3 HOH A 11 1111 25 HOH HOH . C 3 HOH A 12 1112 78 HOH HOH . C 3 HOH A 13 1113 45 HOH HOH . C 3 HOH A 14 1114 59 HOH HOH . C 3 HOH A 15 1115 2 HOH HOH . C 3 HOH A 16 1116 151 HOH HOH . C 3 HOH A 17 1117 71 HOH HOH . C 3 HOH A 18 1118 198 HOH HOH . C 3 HOH A 19 1119 34 HOH HOH . C 3 HOH A 20 1120 191 HOH HOH . C 3 HOH A 21 1121 79 HOH HOH . C 3 HOH A 22 1122 199 HOH HOH . C 3 HOH A 23 1123 26 HOH HOH . C 3 HOH A 24 1124 170 HOH HOH . C 3 HOH A 25 1125 184 HOH HOH . C 3 HOH A 26 1126 14 HOH HOH . C 3 HOH A 27 1127 66 HOH HOH . C 3 HOH A 28 1128 178 HOH HOH . C 3 HOH A 29 1129 70 HOH HOH . C 3 HOH A 30 1130 16 HOH HOH . C 3 HOH A 31 1131 111 HOH HOH . C 3 HOH A 32 1132 4 HOH HOH . C 3 HOH A 33 1133 30 HOH HOH . C 3 HOH A 34 1134 9 HOH HOH . C 3 HOH A 35 1135 24 HOH HOH . C 3 HOH A 36 1136 124 HOH HOH . C 3 HOH A 37 1137 53 HOH HOH . C 3 HOH A 38 1138 5 HOH HOH . C 3 HOH A 39 1139 21 HOH HOH . C 3 HOH A 40 1140 46 HOH HOH . C 3 HOH A 41 1141 134 HOH HOH . C 3 HOH A 42 1142 48 HOH HOH . C 3 HOH A 43 1143 13 HOH HOH . C 3 HOH A 44 1144 115 HOH HOH . C 3 HOH A 45 1145 183 HOH HOH . C 3 HOH A 46 1146 188 HOH HOH . C 3 HOH A 47 1147 3 HOH HOH . C 3 HOH A 48 1148 19 HOH HOH . C 3 HOH A 49 1149 35 HOH HOH . C 3 HOH A 50 1150 75 HOH HOH . C 3 HOH A 51 1151 55 HOH HOH . C 3 HOH A 52 1152 12 HOH HOH . C 3 HOH A 53 1153 6 HOH HOH . C 3 HOH A 54 1154 76 HOH HOH . C 3 HOH A 55 1155 72 HOH HOH . C 3 HOH A 56 1156 85 HOH HOH . C 3 HOH A 57 1157 129 HOH HOH . C 3 HOH A 58 1158 106 HOH HOH . C 3 HOH A 59 1159 120 HOH HOH . C 3 HOH A 60 1160 1 HOH HOH . C 3 HOH A 61 1161 81 HOH HOH . C 3 HOH A 62 1162 44 HOH HOH . C 3 HOH A 63 1163 90 HOH HOH . C 3 HOH A 64 1164 42 HOH HOH . C 3 HOH A 65 1165 192 HOH HOH . C 3 HOH A 66 1166 73 HOH HOH . C 3 HOH A 67 1167 39 HOH HOH . C 3 HOH A 68 1168 69 HOH HOH . C 3 HOH A 69 1169 23 HOH HOH . C 3 HOH A 70 1170 51 HOH HOH . C 3 HOH A 71 1171 84 HOH HOH . C 3 HOH A 72 1172 58 HOH HOH . C 3 HOH A 73 1173 68 HOH HOH . C 3 HOH A 74 1174 154 HOH HOH . C 3 HOH A 75 1175 57 HOH HOH . C 3 HOH A 76 1176 15 HOH HOH . C 3 HOH A 77 1177 196 HOH HOH . C 3 HOH A 78 1178 110 HOH HOH . C 3 HOH A 79 1179 108 HOH HOH . C 3 HOH A 80 1180 171 HOH HOH . C 3 HOH A 81 1181 173 HOH HOH . C 3 HOH A 82 1182 8 HOH HOH . C 3 HOH A 83 1183 82 HOH HOH . C 3 HOH A 84 1184 62 HOH HOH . C 3 HOH A 85 1185 194 HOH HOH . C 3 HOH A 86 1186 37 HOH HOH . C 3 HOH A 87 1187 49 HOH HOH . C 3 HOH A 88 1188 118 HOH HOH . C 3 HOH A 89 1189 80 HOH HOH . C 3 HOH A 90 1190 41 HOH HOH . C 3 HOH A 91 1191 167 HOH HOH . C 3 HOH A 92 1192 83 HOH HOH . C 3 HOH A 93 1193 197 HOH HOH . C 3 HOH A 94 1194 133 HOH HOH . C 3 HOH A 95 1195 127 HOH HOH . C 3 HOH A 96 1196 174 HOH HOH . C 3 HOH A 97 1197 94 HOH HOH . C 3 HOH A 98 1198 50 HOH HOH . C 3 HOH A 99 1199 56 HOH HOH . C 3 HOH A 100 1200 91 HOH HOH . C 3 HOH A 101 1201 29 HOH HOH . C 3 HOH A 102 1202 10 HOH HOH . C 3 HOH A 103 1203 22 HOH HOH . C 3 HOH A 104 1204 166 HOH HOH . C 3 HOH A 105 1205 33 HOH HOH . C 3 HOH A 106 1206 65 HOH HOH . C 3 HOH A 107 1207 172 HOH HOH . C 3 HOH A 108 1208 43 HOH HOH . C 3 HOH A 109 1209 177 HOH HOH . C 3 HOH A 110 1210 168 HOH HOH . C 3 HOH A 111 1211 175 HOH HOH . C 3 HOH A 112 1212 27 HOH HOH . C 3 HOH A 113 1213 190 HOH HOH . C 3 HOH A 114 1214 179 HOH HOH . C 3 HOH A 115 1215 195 HOH HOH . C 3 HOH A 116 1216 185 HOH HOH . C 3 HOH A 117 1217 88 HOH HOH . C 3 HOH A 118 1218 52 HOH HOH . C 3 HOH A 119 1219 186 HOH HOH . C 3 HOH A 120 1220 187 HOH HOH . C 3 HOH A 121 1221 200 HOH HOH . C 3 HOH A 122 1222 176 HOH HOH . C 3 HOH A 123 1223 182 HOH HOH . C 3 HOH A 124 1224 189 HOH HOH . C 3 HOH A 125 1225 54 HOH HOH . C 3 HOH A 126 1226 36 HOH HOH . C 3 HOH A 127 1227 28 HOH HOH . C 3 HOH A 128 1228 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 SJS . . . B 2 -31.564 20.818 -14.352 1 43.8 ? C4 SJS 1001 A 1 HETATM 2 C C5 SJS . . . B 2 -31.642 21.56 -13.17 1 48.98 ? C5 SJS 1001 A 1 HETATM 3 C C6 SJS . . . B 2 -32.633 21.278 -12.242 1 48.44 ? C6 SJS 1001 A 1 HETATM 4 C C8 SJS . . . B 2 -30.501 21.041 -15.376 1 43.24 ? C8 SJS 1001 A 1 HETATM 5 C C10 SJS . . . B 2 -28.209 21.42 -15.97 1 43.56 ? C10 SJS 1001 A 1 HETATM 6 N N12 SJS . . . B 2 -26.374 21.749 -17.212 1 41.24 ? N12 SJS 1001 A 1 HETATM 7 C C15 SJS . . . B 2 -28.588 21.366 -17.326 1 42.96 ? C15 SJS 1001 A 1 HETATM 8 C C17 SJS . . . B 2 -30.793 21.008 -16.749 1 43.14 ? C17 SJS 1001 A 1 HETATM 9 C C20 SJS . . . B 2 -23.722 22.055 -13.784 1 44.15 ? C20 SJS 1001 A 1 HETATM 10 C C24 SJS . . . B 2 -25.678 22.152 -12.478 1 56.96 ? C24 SJS 1001 A 1 HETATM 11 C C28 SJS . . . B 2 -26.215 20.677 -9.425 1 56.94 ? C28 SJS 1001 A 1 HETATM 12 C C1 SJS . . . B 2 -33.541 20.258 -12.459 1 46.05 ? C1 SJS 1001 A 1 HETATM 13 C C11 SJS . . . B 2 -26.76 21.661 -15.961 1 45.08 ? C11 SJS 1001 A 1 HETATM 14 C C18 SJS . . . B 2 -25.887 21.83 -14.778 1 47.04 ? C18 SJS 1001 A 1 HETATM 15 C C19 SJS . . . B 2 -24.508 21.876 -14.929 1 43.5 ? C19 SJS 1001 A 1 HETATM 16 C C2 SJS . . . B 2 -33.464 19.508 -13.611 1 45.09 ? C2 SJS 1001 A 1 HETATM 17 C C27 SJS . . . B 2 -25.583 21.935 -10.021 1 57.5 ? C27 SJS 1001 A 1 HETATM 18 C C29 SJS . . . B 2 -27.712 20.892 -9.214 1 60.1 ? C29 SJS 1001 A 1 HETATM 19 C C3 SJS . . . B 2 -32.482 19.775 -14.549 1 45.45 ? C3 SJS 1001 A 1 HETATM 20 C C30 SJS . . . B 2 -28.348 21.149 -10.578 1 56.34 ? C30 SJS 1001 A 1 HETATM 21 C C31 SJS . . . B 2 -27.751 22.406 -11.212 1 57.4 ? C31 SJS 1001 A 1 HETATM 22 C C9 SJS . . . B 2 -29.178 21.245 -14.979 1 40.79 ? C9 SJS 1001 A 1 HETATM 23 F F33 SJS . . . B 2 -32.438 19.007 -15.663 1 44.7 ? F33 SJS 1001 A 1 HETATM 24 F F7 SJS . . . B 2 -30.779 22.569 -12.915 1 51.43 ? F7 SJS 1001 A 1 HETATM 25 N N13 SJS . . . B 2 -27.454 21.559 -18.072 1 38 ? N13 SJS 1001 A 1 HETATM 26 N N16 SJS . . . B 2 -29.859 21.157 -17.655 1 43.94 ? N16 SJS 1001 A 1 HETATM 27 N N22 SJS . . . B 2 -24.319 22.18 -12.582 1 49.91 ? N22 SJS 1001 A 1 HETATM 28 N N25 SJS . . . B 2 -26.423 21.984 -13.557 1 55.03 ? N25 SJS 1001 A 1 HETATM 29 N N26 SJS . . . B 2 -26.282 22.353 -11.247 1 59.13 ? N26 SJS 1001 A 1 HETATM 30 O O21 SJS . . . B 2 -22.51 22.101 -13.866 1 44.55 ? O21 SJS 1001 A 1 HETATM 31 O O32 SJS . . . B 2 -28.287 19.704 -8.65 1 64.04 ? O32 SJS 1001 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 63 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #