data_6W4Z # _model_server_result.job_id 5ldZrhHGmy-75b6aOyJ61Q _model_server_result.datetime_utc '2024-11-04 23:10:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 6W4Z # _exptl.entry_id 6W4Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.222 _cell.angle_gamma 90 _cell.entry_id 6W4Z _cell.length_a 110.391 _cell.length_b 40.003 _cell.length_c 70.324 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6W4Z _atom_sites.fract_transf_matrix[1][1] 0.009059 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001309 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SZS A 1 201 170 SZS MA1 . D 3 CL A 1 202 180 CL CL . E 4 EDO A 1 203 190 EDO EDO . F 2 SZS B 1 201 170 SZS MA1 . G 5 PG4 B 1 202 180 PG4 PG4 . H 4 EDO B 1 203 190 EDO EDO . I 6 HOH A 1 301 160 HOH HOH . I 6 HOH A 2 302 169 HOH HOH . I 6 HOH A 3 303 125 HOH HOH . I 6 HOH A 4 304 156 HOH HOH . I 6 HOH A 5 305 150 HOH HOH . I 6 HOH A 6 306 165 HOH HOH . I 6 HOH A 7 307 75 HOH HOH . I 6 HOH A 8 308 44 HOH HOH . I 6 HOH A 9 309 90 HOH HOH . I 6 HOH A 10 310 40 HOH HOH . I 6 HOH A 11 311 35 HOH HOH . I 6 HOH A 12 312 161 HOH HOH . I 6 HOH A 13 313 82 HOH HOH . I 6 HOH A 14 314 116 HOH HOH . I 6 HOH A 15 315 54 HOH HOH . I 6 HOH A 16 316 88 HOH HOH . I 6 HOH A 17 317 59 HOH HOH . I 6 HOH A 18 318 53 HOH HOH . I 6 HOH A 19 319 91 HOH HOH . I 6 HOH A 20 320 86 HOH HOH . I 6 HOH A 21 321 55 HOH HOH . I 6 HOH A 22 322 48 HOH HOH . I 6 HOH A 23 323 80 HOH HOH . I 6 HOH A 24 324 24 HOH HOH . I 6 HOH A 25 325 153 HOH HOH . I 6 HOH A 26 326 5 HOH HOH . I 6 HOH A 27 327 8 HOH HOH . I 6 HOH A 28 328 84 HOH HOH . I 6 HOH A 29 329 4 HOH HOH . I 6 HOH A 30 330 107 HOH HOH . I 6 HOH A 31 331 168 HOH HOH . I 6 HOH A 32 332 114 HOH HOH . I 6 HOH A 33 333 162 HOH HOH . I 6 HOH A 34 334 31 HOH HOH . I 6 HOH A 35 335 98 HOH HOH . I 6 HOH A 36 336 60 HOH HOH . I 6 HOH A 37 337 30 HOH HOH . I 6 HOH A 38 338 110 HOH HOH . I 6 HOH A 39 339 12 HOH HOH . I 6 HOH A 40 340 39 HOH HOH . I 6 HOH A 41 341 83 HOH HOH . I 6 HOH A 42 342 29 HOH HOH . I 6 HOH A 43 343 166 HOH HOH . I 6 HOH A 44 344 81 HOH HOH . I 6 HOH A 45 345 66 HOH HOH . I 6 HOH A 46 346 71 HOH HOH . I 6 HOH A 47 347 41 HOH HOH . I 6 HOH A 48 348 159 HOH HOH . I 6 HOH A 49 349 151 HOH HOH . I 6 HOH A 50 350 22 HOH HOH . I 6 HOH A 51 351 36 HOH HOH . I 6 HOH A 52 352 15 HOH HOH . I 6 HOH A 53 353 10 HOH HOH . I 6 HOH A 54 354 167 HOH HOH . I 6 HOH A 55 355 149 HOH HOH . I 6 HOH A 56 356 115 HOH HOH . I 6 HOH A 57 357 126 HOH HOH . I 6 HOH A 58 358 171 HOH HOH . I 6 HOH A 59 359 170 HOH HOH . I 6 HOH A 60 360 111 HOH HOH . J 6 HOH B 1 301 163 HOH HOH . J 6 HOH B 2 302 174 HOH HOH . J 6 HOH B 3 303 146 HOH HOH . J 6 HOH B 4 304 3 HOH HOH . J 6 HOH B 5 305 177 HOH HOH . J 6 HOH B 6 306 141 HOH HOH . J 6 HOH B 7 307 7 HOH HOH . J 6 HOH B 8 308 73 HOH HOH . J 6 HOH B 9 309 89 HOH HOH . J 6 HOH B 10 310 136 HOH HOH . J 6 HOH B 11 311 140 HOH HOH . J 6 HOH B 12 312 106 HOH HOH . J 6 HOH B 13 313 147 HOH HOH . J 6 HOH B 14 314 32 HOH HOH . J 6 HOH B 15 315 78 HOH HOH . J 6 HOH B 16 316 118 HOH HOH . J 6 HOH B 17 317 45 HOH HOH . J 6 HOH B 18 318 148 HOH HOH . J 6 HOH B 19 319 47 HOH HOH . J 6 HOH B 20 320 42 HOH HOH . J 6 HOH B 21 321 38 HOH HOH . J 6 HOH B 22 322 37 HOH HOH . J 6 HOH B 23 323 68 HOH HOH . J 6 HOH B 24 324 14 HOH HOH . J 6 HOH B 25 325 154 HOH HOH . J 6 HOH B 26 326 143 HOH HOH . J 6 HOH B 27 327 101 HOH HOH . J 6 HOH B 28 328 28 HOH HOH . J 6 HOH B 29 329 105 HOH HOH . J 6 HOH B 30 330 131 HOH HOH . J 6 HOH B 31 331 74 HOH HOH . J 6 HOH B 32 332 92 HOH HOH . J 6 HOH B 33 333 142 HOH HOH . J 6 HOH B 34 334 13 HOH HOH . J 6 HOH B 35 335 23 HOH HOH . J 6 HOH B 36 336 155 HOH HOH . J 6 HOH B 37 337 124 HOH HOH . J 6 HOH B 38 338 70 HOH HOH . J 6 HOH B 39 339 99 HOH HOH . J 6 HOH B 40 340 138 HOH HOH . J 6 HOH B 41 341 139 HOH HOH . J 6 HOH B 42 342 67 HOH HOH . J 6 HOH B 43 343 9 HOH HOH . J 6 HOH B 44 344 26 HOH HOH . J 6 HOH B 45 345 69 HOH HOH . J 6 HOH B 46 346 144 HOH HOH . J 6 HOH B 47 347 102 HOH HOH . J 6 HOH B 48 348 25 HOH HOH . J 6 HOH B 49 349 180 HOH HOH . J 6 HOH B 50 350 181 HOH HOH . J 6 HOH B 51 351 161 HOH HOH . J 6 HOH B 52 352 19 HOH HOH . J 6 HOH B 53 353 130 HOH HOH . J 6 HOH B 54 354 128 HOH HOH . J 6 HOH B 55 355 121 HOH HOH . J 6 HOH B 56 356 137 HOH HOH . J 6 HOH B 57 357 120 HOH HOH . J 6 HOH B 58 358 145 HOH HOH . J 6 HOH B 59 359 72 HOH HOH . J 6 HOH B 60 360 164 HOH HOH . J 6 HOH B 61 361 34 HOH HOH . J 6 HOH B 62 362 176 HOH HOH . J 6 HOH B 63 363 11 HOH HOH . J 6 HOH B 64 364 87 HOH HOH . J 6 HOH B 65 365 158 HOH HOH . J 6 HOH B 66 366 179 HOH HOH . J 6 HOH B 67 367 57 HOH HOH . J 6 HOH B 68 368 27 HOH HOH . J 6 HOH B 69 369 152 HOH HOH . J 6 HOH B 70 370 173 HOH HOH . J 6 HOH B 71 371 104 HOH HOH . J 6 HOH B 72 372 172 HOH HOH . J 6 HOH B 73 373 175 HOH HOH . J 6 HOH B 74 374 96 HOH HOH . J 6 HOH B 75 375 119 HOH HOH . J 6 HOH B 76 376 122 HOH HOH . J 6 HOH B 77 377 178 HOH HOH . J 6 HOH B 78 378 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 4 0.118 -16.667 0.647 0.5 15.3 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . E 4 -0.351 -16.032 -0.533 0.5 16.61 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . E 4 0.191 -18.164 0.608 0.5 13.48 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . E 4 0.411 -18.625 1.989 0.5 13.62 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #