data_6W54 # _model_server_result.job_id iJTBfeCeTavCp0dIA99g9A _model_server_result.datetime_utc '2024-11-23 21:47:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w54 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6W54 # _exptl.entry_id 6W54 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6W54 _cell.length_a 81.971 _cell.length_b 81.971 _cell.length_c 103.055 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W54 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'R 3' _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 49 A GLU 49 1_555 D CO CO . A CO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc2 A O GLU 88 A GLU 88 1_555 C K K . A K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc3 A OE1 GLU 88 A GLU 88 1_555 C K K . A K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc4 A O GLU 88 A GLU 88 1_555 C K K . A K 302 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc5 A OE1 GLU 88 A GLU 88 1_555 C K K . A K 302 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc6 D CO CO . A CO 303 1_555 E O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc7 D CO CO . A CO 303 1_555 E O HOH . A HOH 426 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc8 D CO CO . A CO 303 1_555 E O HOH . A HOH 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc9 D CO CO . A CO 303 1_555 E O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6W54 _atom_sites.fract_transf_matrix[1][1] 0.012199 _atom_sites.fract_transf_matrix[1][2] 0.007043 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009704 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4NC A 1 301 403 4NC 4NC . C 3 K A 1 302 1 K K . D 4 CO A 1 303 1 CO CO . E 5 HOH A 1 401 153 HOH HOH . E 5 HOH A 2 402 180 HOH HOH . E 5 HOH A 3 403 186 HOH HOH . E 5 HOH A 4 404 85 HOH HOH . E 5 HOH A 5 405 83 HOH HOH . E 5 HOH A 6 406 89 HOH HOH . E 5 HOH A 7 407 46 HOH HOH . E 5 HOH A 8 408 104 HOH HOH . E 5 HOH A 9 409 13 HOH HOH . E 5 HOH A 10 410 51 HOH HOH . E 5 HOH A 11 411 27 HOH HOH . E 5 HOH A 12 412 121 HOH HOH . E 5 HOH A 13 413 176 HOH HOH . E 5 HOH A 14 414 99 HOH HOH . E 5 HOH A 15 415 84 HOH HOH . E 5 HOH A 16 416 56 HOH HOH . E 5 HOH A 17 417 76 HOH HOH . E 5 HOH A 18 418 78 HOH HOH . E 5 HOH A 19 419 47 HOH HOH . E 5 HOH A 20 420 138 HOH HOH . E 5 HOH A 21 421 72 HOH HOH . E 5 HOH A 22 422 119 HOH HOH . E 5 HOH A 23 423 145 HOH HOH . E 5 HOH A 24 424 23 HOH HOH . E 5 HOH A 25 425 126 HOH HOH . E 5 HOH A 26 426 66 HOH HOH . E 5 HOH A 27 427 3 HOH HOH . E 5 HOH A 28 428 96 HOH HOH . E 5 HOH A 29 429 8 HOH HOH . E 5 HOH A 30 430 158 HOH HOH . E 5 HOH A 31 431 6 HOH HOH . E 5 HOH A 32 432 34 HOH HOH . E 5 HOH A 33 433 175 HOH HOH . E 5 HOH A 34 434 40 HOH HOH . E 5 HOH A 35 435 25 HOH HOH . E 5 HOH A 36 436 93 HOH HOH . E 5 HOH A 37 437 24 HOH HOH . E 5 HOH A 38 438 125 HOH HOH . E 5 HOH A 39 439 33 HOH HOH . E 5 HOH A 40 440 149 HOH HOH . E 5 HOH A 41 441 148 HOH HOH . E 5 HOH A 42 442 82 HOH HOH . E 5 HOH A 43 443 98 HOH HOH . E 5 HOH A 44 444 41 HOH HOH . E 5 HOH A 45 445 30 HOH HOH . E 5 HOH A 46 446 64 HOH HOH . E 5 HOH A 47 447 74 HOH HOH . E 5 HOH A 48 448 60 HOH HOH . E 5 HOH A 49 449 163 HOH HOH . E 5 HOH A 50 450 91 HOH HOH . E 5 HOH A 51 451 4 HOH HOH . E 5 HOH A 52 452 92 HOH HOH . E 5 HOH A 53 453 112 HOH HOH . E 5 HOH A 54 454 16 HOH HOH . E 5 HOH A 55 455 22 HOH HOH . E 5 HOH A 56 456 5 HOH HOH . E 5 HOH A 57 457 95 HOH HOH . E 5 HOH A 58 458 58 HOH HOH . E 5 HOH A 59 459 48 HOH HOH . E 5 HOH A 60 460 168 HOH HOH . E 5 HOH A 61 461 20 HOH HOH . E 5 HOH A 62 462 10 HOH HOH . E 5 HOH A 63 463 80 HOH HOH . E 5 HOH A 64 464 136 HOH HOH . E 5 HOH A 65 465 29 HOH HOH . E 5 HOH A 66 466 67 HOH HOH . E 5 HOH A 67 467 12 HOH HOH . E 5 HOH A 68 468 63 HOH HOH . E 5 HOH A 69 469 18 HOH HOH . E 5 HOH A 70 470 37 HOH HOH . E 5 HOH A 71 471 97 HOH HOH . E 5 HOH A 72 472 146 HOH HOH . E 5 HOH A 73 473 81 HOH HOH . E 5 HOH A 74 474 50 HOH HOH . E 5 HOH A 75 475 185 HOH HOH . E 5 HOH A 76 476 44 HOH HOH . E 5 HOH A 77 477 7 HOH HOH . E 5 HOH A 78 478 11 HOH HOH . E 5 HOH A 79 479 19 HOH HOH . E 5 HOH A 80 480 28 HOH HOH . E 5 HOH A 81 481 1 HOH HOH . E 5 HOH A 82 482 68 HOH HOH . E 5 HOH A 83 483 113 HOH HOH . E 5 HOH A 84 484 2 HOH HOH . E 5 HOH A 85 485 15 HOH HOH . E 5 HOH A 86 486 101 HOH HOH . E 5 HOH A 87 487 134 HOH HOH . E 5 HOH A 88 488 159 HOH HOH . E 5 HOH A 89 489 17 HOH HOH . E 5 HOH A 90 490 43 HOH HOH . E 5 HOH A 91 491 31 HOH HOH . E 5 HOH A 92 492 73 HOH HOH . E 5 HOH A 93 493 65 HOH HOH . E 5 HOH A 94 494 21 HOH HOH . E 5 HOH A 95 495 26 HOH HOH . E 5 HOH A 96 496 14 HOH HOH . E 5 HOH A 97 497 75 HOH HOH . E 5 HOH A 98 498 142 HOH HOH . E 5 HOH A 99 499 45 HOH HOH . E 5 HOH A 100 500 160 HOH HOH . E 5 HOH A 101 501 38 HOH HOH . E 5 HOH A 102 502 100 HOH HOH . E 5 HOH A 103 503 53 HOH HOH . E 5 HOH A 104 504 165 HOH HOH . E 5 HOH A 105 505 118 HOH HOH . E 5 HOH A 106 506 169 HOH HOH . E 5 HOH A 107 507 120 HOH HOH . E 5 HOH A 108 508 140 HOH HOH . E 5 HOH A 109 509 69 HOH HOH . E 5 HOH A 110 510 61 HOH HOH . E 5 HOH A 111 511 49 HOH HOH . E 5 HOH A 112 512 170 HOH HOH . E 5 HOH A 113 513 35 HOH HOH . E 5 HOH A 114 514 55 HOH HOH . E 5 HOH A 115 515 111 HOH HOH . E 5 HOH A 116 516 59 HOH HOH . E 5 HOH A 117 517 114 HOH HOH . E 5 HOH A 118 518 71 HOH HOH . E 5 HOH A 119 519 131 HOH HOH . E 5 HOH A 120 520 179 HOH HOH . E 5 HOH A 121 521 171 HOH HOH . E 5 HOH A 122 522 143 HOH HOH . E 5 HOH A 123 523 110 HOH HOH . E 5 HOH A 124 524 52 HOH HOH . E 5 HOH A 125 525 32 HOH HOH . E 5 HOH A 126 526 62 HOH HOH . E 5 HOH A 127 527 109 HOH HOH . E 5 HOH A 128 528 42 HOH HOH . E 5 HOH A 129 529 94 HOH HOH . E 5 HOH A 130 530 155 HOH HOH . E 5 HOH A 131 531 177 HOH HOH . E 5 HOH A 132 532 36 HOH HOH . E 5 HOH A 133 533 172 HOH HOH . E 5 HOH A 134 534 39 HOH HOH . E 5 HOH A 135 535 54 HOH HOH . E 5 HOH A 136 536 122 HOH HOH . E 5 HOH A 137 537 77 HOH HOH . E 5 HOH A 138 538 117 HOH HOH . E 5 HOH A 139 539 157 HOH HOH . E 5 HOH A 140 540 9 HOH HOH . E 5 HOH A 141 541 161 HOH HOH . E 5 HOH A 142 542 154 HOH HOH . E 5 HOH A 143 543 151 HOH HOH . E 5 HOH A 144 544 150 HOH HOH . E 5 HOH A 145 545 57 HOH HOH . E 5 HOH A 146 546 141 HOH HOH . E 5 HOH A 147 547 182 HOH HOH . E 5 HOH A 148 548 147 HOH HOH . E 5 HOH A 149 549 144 HOH HOH . E 5 HOH A 150 550 162 HOH HOH . E 5 HOH A 151 551 87 HOH HOH . E 5 HOH A 152 552 106 HOH HOH . E 5 HOH A 153 553 164 HOH HOH . E 5 HOH A 154 554 123 HOH HOH . E 5 HOH A 155 555 88 HOH HOH . E 5 HOH A 156 556 105 HOH HOH . E 5 HOH A 157 557 173 HOH HOH . E 5 HOH A 158 558 79 HOH HOH . E 5 HOH A 159 559 116 HOH HOH . E 5 HOH A 160 560 124 HOH HOH . E 5 HOH A 161 561 133 HOH HOH . E 5 HOH A 162 562 108 HOH HOH . E 5 HOH A 163 563 103 HOH HOH . E 5 HOH A 164 564 132 HOH HOH . E 5 HOH A 165 565 184 HOH HOH . E 5 HOH A 166 566 174 HOH HOH . E 5 HOH A 167 567 86 HOH HOH . E 5 HOH A 168 568 130 HOH HOH . E 5 HOH A 169 569 166 HOH HOH . E 5 HOH A 170 570 183 HOH HOH . E 5 HOH A 171 571 178 HOH HOH . E 5 HOH A 172 572 70 HOH HOH . E 5 HOH A 173 573 135 HOH HOH . E 5 HOH A 174 574 137 HOH HOH . E 5 HOH A 175 575 167 HOH HOH . E 5 HOH A 176 576 156 HOH HOH . E 5 HOH A 177 577 127 HOH HOH . E 5 HOH A 178 578 107 HOH HOH . E 5 HOH A 179 579 115 HOH HOH . E 5 HOH A 180 580 139 HOH HOH . E 5 HOH A 181 581 102 HOH HOH . E 5 HOH A 182 582 181 HOH HOH . E 5 HOH A 183 583 129 HOH HOH . E 5 HOH A 184 584 90 HOH HOH . E 5 HOH A 185 585 128 HOH HOH . E 5 HOH A 186 586 152 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -16.996 _atom_site.Cartn_y 6.788 _atom_site.Cartn_z 84.003 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #