data_6W58 # _model_server_result.job_id m7g4QzfPCQIKImrvCRVo1w _model_server_result.datetime_utc '2025-02-28 02:20:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w58 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 6W58 # _exptl.entry_id 6W58 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.473 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-(azetidin-1-yl)-~{N}-[4-(2-oxidanylpropan-2-yl)cyclohexyl]-1,6-naphthyridine-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.83 _cell.angle_gamma 90 _cell.entry_id 6W58 _cell.length_a 47.863 _cell.length_b 67.281 _cell.length_c 67.204 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W58 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C21 H28 N4 O2' _chem_comp.formula_weight 368.473 _chem_comp.id SWS _chem_comp.mon_nstd_flag . _chem_comp.name 7-(azetidin-1-yl)-~{N}-[4-(2-oxidanylpropan-2-yl)cyclohexyl]-1,6-naphthyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C27 SWS sing 326 n n C26 C25 SWS sing 327 n n C27 N24 SWS sing 328 n n N16 C15 SWS doub 329 n y N16 C17 SWS sing 330 n y C18 C17 SWS doub 331 n y C18 C19 SWS sing 332 n y N24 C25 SWS sing 333 n n N24 C19 SWS sing 334 n n C15 C14 SWS sing 335 n y C17 C22 SWS sing 336 n y C19 N20 SWS doub 337 n y C14 C12 SWS sing 338 n n C14 C23 SWS doub 339 n y C07 C06 SWS sing 340 n n C07 C08 SWS sing 341 n n O13 C12 SWS doub 342 n n C22 C23 SWS sing 343 n y C22 C21 SWS doub 344 n y N20 C21 SWS sing 345 n y C12 N11 SWS sing 346 n n C06 C05 SWS sing 347 n n N11 C08 SWS sing 348 n n C08 C09 SWS sing 349 n n O04 C02 SWS sing 350 n n C01 C02 SWS sing 351 n n C05 C02 SWS sing 352 n n C05 C10 SWS sing 353 n n C02 C03 SWS sing 354 n n C09 C10 SWS sing 355 n n C10 H1 SWS sing 356 n n C10 H2 SWS sing 357 n n C15 H3 SWS sing 358 n n C21 H4 SWS sing 359 n n C26 H5 SWS sing 360 n n C26 H6 SWS sing 361 n n C01 H7 SWS sing 362 n n C01 H8 SWS sing 363 n n C01 H9 SWS sing 364 n n C03 H10 SWS sing 365 n n C03 H11 SWS sing 366 n n C03 H12 SWS sing 367 n n C05 H13 SWS sing 368 n n C06 H14 SWS sing 369 n n C06 H15 SWS sing 370 n n C07 H16 SWS sing 371 n n C07 H17 SWS sing 372 n n C08 H18 SWS sing 373 n n C09 H19 SWS sing 374 n n C09 H20 SWS sing 375 n n C18 H21 SWS sing 376 n n C23 H22 SWS sing 377 n n C25 H23 SWS sing 378 n n C25 H24 SWS sing 379 n n C27 H25 SWS sing 380 n n C27 H26 SWS sing 381 n n N11 H27 SWS sing 382 n n O04 H28 SWS sing 383 n n # _atom_sites.entry_id 6W58 _atom_sites.fract_transf_matrix[1][1] 0.020893 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002502 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 201 1 GSH GSH . D 3 SWS A 1 202 1 SWS LIG . E 3 SWS B 1 201 2 SWS LIG . F 4 HOH A 1 301 13 HOH HOH . F 4 HOH A 2 302 17 HOH HOH . F 4 HOH A 3 303 9 HOH HOH . F 4 HOH A 4 304 15 HOH HOH . F 4 HOH A 5 305 11 HOH HOH . F 4 HOH A 6 306 19 HOH HOH . F 4 HOH A 7 307 12 HOH HOH . F 4 HOH A 8 308 3 HOH HOH . F 4 HOH A 9 309 10 HOH HOH . F 4 HOH A 10 310 16 HOH HOH . F 4 HOH A 11 311 22 HOH HOH . F 4 HOH A 12 312 14 HOH HOH . G 4 HOH B 1 301 2 HOH HOH . G 4 HOH B 2 302 6 HOH HOH . G 4 HOH B 3 303 20 HOH HOH . G 4 HOH B 4 304 1 HOH HOH . G 4 HOH B 5 305 4 HOH HOH . G 4 HOH B 6 306 7 HOH HOH . G 4 HOH B 7 307 5 HOH HOH . G 4 HOH B 8 308 18 HOH HOH . G 4 HOH B 9 309 21 HOH HOH . G 4 HOH B 10 310 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 SWS . . . E 3 48.378 -3.093 97.649 1 105.58 ? C10 SWS 201 B 1 HETATM 2 C C15 SWS . . . E 3 49.022 4.106 96.021 1 96.14 ? C15 SWS 201 B 1 HETATM 3 C C17 SWS . . . E 3 49.411 4.892 93.902 1 87.41 ? C17 SWS 201 B 1 HETATM 4 C C21 SWS . . . E 3 49.781 3.454 92.011 1 78.59 ? C21 SWS 201 B 1 HETATM 5 C C22 SWS . . . E 3 49.515 3.57 93.406 1 85.35 ? C22 SWS 201 B 1 HETATM 6 C C26 SWS . . . E 3 49.065 8.143 89.542 1 64.53 ? C26 SWS 201 B 1 HETATM 7 C C01 SWS . . . E 3 45.001 -4.187 99.2 1 101.73 ? C01 SWS 201 B 1 HETATM 8 C C02 SWS . . . E 3 46.515 -4.101 99.123 1 102.11 ? C02 SWS 201 B 1 HETATM 9 C C03 SWS . . . E 3 47.113 -4.02 100.518 1 99.43 ? C03 SWS 201 B 1 HETATM 10 C C05 SWS . . . E 3 46.975 -2.926 98.231 1 106.43 ? C05 SWS 201 B 1 HETATM 11 C C06 SWS . . . E 3 46.904 -1.57 98.922 1 107.76 ? C06 SWS 201 B 1 HETATM 12 C C07 SWS . . . E 3 47.208 -0.442 97.952 1 106.39 ? C07 SWS 201 B 1 HETATM 13 C C08 SWS . . . E 3 48.577 -0.6 97.314 1 104.13 ? C08 SWS 201 B 1 HETATM 14 C C09 SWS . . . E 3 48.721 -1.97 96.672 1 103.96 ? C09 SWS 201 B 1 HETATM 15 C C12 SWS . . . E 3 48.902 1.746 96.713 1 101.72 ? C12 SWS 201 B 1 HETATM 16 C C14 SWS . . . E 3 49.106 2.769 95.645 1 98.72 ? C14 SWS 201 B 1 HETATM 17 C C18 SWS . . . E 3 49.561 5.987 93.04 1 86.24 ? C18 SWS 201 B 1 HETATM 18 C C19 SWS . . . E 3 49.816 5.694 91.707 1 82.41 ? C19 SWS 201 B 1 HETATM 19 C C23 SWS . . . E 3 49.352 2.512 94.315 1 93.51 ? C23 SWS 201 B 1 HETATM 20 C C25 SWS . . . E 3 49.842 6.839 89.39 1 65.95 ? C25 SWS 201 B 1 HETATM 21 C C27 SWS . . . E 3 49.357 8.108 91.045 1 63.54 ? C27 SWS 201 B 1 HETATM 22 N N11 SWS . . . E 3 48.799 0.465 96.338 1 103.24 ? N11 SWS 201 B 1 HETATM 23 N N16 SWS . . . E 3 49.161 5.137 95.229 1 91.56 ? N16 SWS 201 B 1 HETATM 24 N N20 SWS . . . E 3 49.916 4.468 91.184 1 81.39 ? N20 SWS 201 B 1 HETATM 25 N N24 SWS . . . E 3 49.936 6.766 90.859 1 72.28 ? N24 SWS 201 B 1 HETATM 26 O O04 SWS . . . E 3 46.986 -5.316 98.508 1 100.8 ? O04 SWS 201 B 1 HETATM 27 O O13 SWS . . . E 3 48.804 2.085 97.889 1 102.6 ? O13 SWS 201 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #