data_6W5J
#
_model_server_result.job_id            2IVNwH1IVB8ie5C0EqCHhg 
_model_server_result.datetime_utc      '2025-02-05 12:38:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6w5j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    6W5J 
#
_exptl.entry_id    6W5J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              554.142 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-1-sulfanylpropan-2-yl}amino)-1-oxopropan-2-yl]carbamate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.6 
_cell.angle_gamma         90 
_cell.entry_id            6W5J 
_cell.length_a            37.469 
_cell.length_b            34.986 
_cell.length_c            111.473 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6W5J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 145 A CYS 139 1_555 C C25 TKS . A TKS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
covale ? covale2 B SG CYS 145 B CYS 139 1_555 D C25 TKS . B TKS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? 
#
_chem_comp.formula           'C27 H40 Cl N3 O5 S' 
_chem_comp.formula_weight    554.142 
_chem_comp.id                TKS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-1-sulfanylpropan-2-yl}amino)-1-oxopropan-2-yl]carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C35 C36 TKS doub 306 n y 
C35 C34 TKS sing 307 n y 
C11 C12 TKS sing 308 n n 
C11 C10 TKS sing 309 n n 
C36 C30 TKS sing 310 n y 
C12 C13 TKS sing 311 n n 
C34 C32 TKS doub 312 n y 
C01 C02 TKS sing 313 n n 
C10 C09 TKS sing 314 n n 
C13 C14 TKS sing 315 n n 
C30 C02 TKS sing 316 n n 
C30 C31 TKS doub 317 n y 
C02 C29 TKS sing 318 n n 
C02 C03 TKS sing 319 n n 
C09 C14 TKS sing 320 n n 
C09 C08 TKS sing 321 n n 
C32 C31 TKS sing 322 n y 
C32 CL3 TKS sing 323 n n 
O04 C03 TKS sing 324 n n 
O04 C05 TKS sing 325 n n 
N06 C05 TKS sing 326 n n 
N06 C07 TKS sing 327 n n 
C08 C07 TKS sing 328 n n 
C05 O28 TKS doub 329 n n 
C07 C15 TKS sing 330 n n 
O27 C15 TKS doub 331 n n 
C15 N16 TKS sing 332 n n 
N16 C17 TKS sing 333 n n 
O26 C25 TKS sing 334 n n 
C23 C22 TKS sing 335 n n 
C23 C19 TKS sing 336 n n 
C17 C25 TKS sing 337 n n 
C17 C18 TKS sing 338 n n 
C22 N21 TKS sing 339 n n 
C19 C18 TKS sing 340 n n 
C19 C20 TKS sing 341 n n 
N21 C20 TKS sing 342 n n 
C20 O24 TKS doub 343 n n 
C25 S1 TKS sing 344 n n 
C10 H1 TKS sing 345 n n 
C10 H2 TKS sing 346 n n 
C12 H3 TKS sing 347 n n 
C12 H4 TKS sing 348 n n 
C13 H5 TKS sing 349 n n 
C13 H6 TKS sing 350 n n 
C11 H7 TKS sing 351 n n 
C11 H8 TKS sing 352 n n 
C14 H9 TKS sing 353 n n 
C14 H10 TKS sing 354 n n 
C17 H11 TKS sing 355 n n 
C18 H12 TKS sing 356 n n 
C18 H13 TKS sing 357 n n 
C22 H14 TKS sing 358 n n 
C22 H15 TKS sing 359 n n 
C23 H16 TKS sing 360 n n 
C23 H17 TKS sing 361 n n 
C25 H18 TKS sing 362 n n 
C29 H19 TKS sing 363 n n 
C29 H20 TKS sing 364 n n 
C29 H21 TKS sing 365 n n 
C01 H22 TKS sing 366 n n 
C01 H23 TKS sing 367 n n 
C01 H24 TKS sing 368 n n 
C03 H25 TKS sing 369 n n 
C03 H26 TKS sing 370 n n 
C07 H27 TKS sing 371 n n 
C08 H28 TKS sing 372 n n 
C08 H29 TKS sing 373 n n 
C09 H30 TKS sing 374 n n 
C19 H31 TKS sing 375 n n 
C31 H32 TKS sing 376 n n 
C34 H33 TKS sing 377 n n 
C35 H34 TKS sing 378 n n 
C36 H35 TKS sing 379 n n 
N06 H36 TKS sing 380 n n 
N16 H37 TKS sing 381 n n 
N21 H38 TKS sing 382 n n 
O26 H39 TKS sing 383 n n 
S1 H40 TKS sing 384 n n 
#
_atom_sites.entry_id                     6W5J 
_atom_sites.fract_transf_matrix[1][1]    0.026689 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003561 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028583 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00905 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TKS A 1 201 1 TKS A17 . 
D 2 TKS B 1 201 2 TKS A17 . 
E 3 HOH A 1 301 100 HOH HOH . 
E 3 HOH A 2 302 59 HOH HOH . 
E 3 HOH A 3 303 18 HOH HOH . 
E 3 HOH A 4 304 24 HOH HOH . 
E 3 HOH A 5 305 32 HOH HOH . 
E 3 HOH A 6 306 13 HOH HOH . 
E 3 HOH A 7 307 17 HOH HOH . 
E 3 HOH A 8 308 20 HOH HOH . 
E 3 HOH A 9 309 12 HOH HOH . 
E 3 HOH A 10 310 62 HOH HOH . 
E 3 HOH A 11 311 82 HOH HOH . 
E 3 HOH A 12 312 67 HOH HOH . 
E 3 HOH A 13 313 16 HOH HOH . 
E 3 HOH A 14 314 31 HOH HOH . 
E 3 HOH A 15 315 44 HOH HOH . 
E 3 HOH A 16 316 45 HOH HOH . 
E 3 HOH A 17 317 64 HOH HOH . 
E 3 HOH A 18 318 69 HOH HOH . 
E 3 HOH A 19 319 72 HOH HOH . 
E 3 HOH A 20 320 28 HOH HOH . 
E 3 HOH A 21 321 4 HOH HOH . 
E 3 HOH A 22 322 34 HOH HOH . 
E 3 HOH A 23 323 80 HOH HOH . 
E 3 HOH A 24 324 22 HOH HOH . 
E 3 HOH A 25 325 77 HOH HOH . 
E 3 HOH A 26 326 35 HOH HOH . 
E 3 HOH A 27 327 26 HOH HOH . 
E 3 HOH A 28 328 92 HOH HOH . 
E 3 HOH A 29 329 63 HOH HOH . 
E 3 HOH A 30 330 30 HOH HOH . 
E 3 HOH A 31 331 107 HOH HOH . 
E 3 HOH A 32 332 5 HOH HOH . 
E 3 HOH A 33 333 42 HOH HOH . 
E 3 HOH A 34 334 93 HOH HOH . 
E 3 HOH A 35 335 104 HOH HOH . 
E 3 HOH A 36 336 70 HOH HOH . 
E 3 HOH A 37 337 39 HOH HOH . 
E 3 HOH A 38 338 15 HOH HOH . 
E 3 HOH A 39 339 53 HOH HOH . 
E 3 HOH A 40 340 56 HOH HOH . 
E 3 HOH A 41 341 33 HOH HOH . 
E 3 HOH A 42 342 10 HOH HOH . 
E 3 HOH A 43 343 78 HOH HOH . 
E 3 HOH A 44 344 50 HOH HOH . 
E 3 HOH A 45 345 25 HOH HOH . 
E 3 HOH A 46 346 47 HOH HOH . 
E 3 HOH A 47 347 65 HOH HOH . 
E 3 HOH A 48 348 52 HOH HOH . 
E 3 HOH A 49 349 48 HOH HOH . 
E 3 HOH A 50 350 83 HOH HOH . 
E 3 HOH A 51 351 71 HOH HOH . 
E 3 HOH A 52 352 7 HOH HOH . 
E 3 HOH A 53 353 6 HOH HOH . 
E 3 HOH A 54 354 3 HOH HOH . 
E 3 HOH A 55 355 54 HOH HOH . 
E 3 HOH A 56 356 87 HOH HOH . 
E 3 HOH A 57 357 89 HOH HOH . 
E 3 HOH A 58 358 109 HOH HOH . 
E 3 HOH A 59 359 21 HOH HOH . 
E 3 HOH A 60 360 38 HOH HOH . 
E 3 HOH A 61 361 40 HOH HOH . 
E 3 HOH A 62 362 51 HOH HOH . 
E 3 HOH A 63 363 97 HOH HOH . 
E 3 HOH A 64 364 85 HOH HOH . 
E 3 HOH A 65 365 94 HOH HOH . 
E 3 HOH A 66 366 91 HOH HOH . 
E 3 HOH A 67 367 108 HOH HOH . 
E 3 HOH A 68 368 99 HOH HOH . 
F 3 HOH B 1 301 84 HOH HOH . 
F 3 HOH B 2 302 49 HOH HOH . 
F 3 HOH B 3 303 101 HOH HOH . 
F 3 HOH B 4 304 75 HOH HOH . 
F 3 HOH B 5 305 105 HOH HOH . 
F 3 HOH B 6 306 81 HOH HOH . 
F 3 HOH B 7 307 102 HOH HOH . 
F 3 HOH B 8 308 36 HOH HOH . 
F 3 HOH B 9 309 86 HOH HOH . 
F 3 HOH B 10 310 8 HOH HOH . 
F 3 HOH B 11 311 19 HOH HOH . 
F 3 HOH B 12 312 66 HOH HOH . 
F 3 HOH B 13 313 61 HOH HOH . 
F 3 HOH B 14 314 9 HOH HOH . 
F 3 HOH B 15 315 43 HOH HOH . 
F 3 HOH B 16 316 37 HOH HOH . 
F 3 HOH B 17 317 103 HOH HOH . 
F 3 HOH B 18 318 41 HOH HOH . 
F 3 HOH B 19 319 46 HOH HOH . 
F 3 HOH B 20 320 95 HOH HOH . 
F 3 HOH B 21 321 74 HOH HOH . 
F 3 HOH B 22 322 11 HOH HOH . 
F 3 HOH B 23 323 68 HOH HOH . 
F 3 HOH B 24 324 110 HOH HOH . 
F 3 HOH B 25 325 14 HOH HOH . 
F 3 HOH B 26 326 79 HOH HOH . 
F 3 HOH B 27 327 27 HOH HOH . 
F 3 HOH B 28 328 29 HOH HOH . 
F 3 HOH B 29 329 23 HOH HOH . 
F 3 HOH B 30 330 58 HOH HOH . 
F 3 HOH B 31 331 1 HOH HOH . 
F 3 HOH B 32 332 76 HOH HOH . 
F 3 HOH B 33 333 57 HOH HOH . 
F 3 HOH B 34 334 90 HOH HOH . 
F 3 HOH B 35 335 60 HOH HOH . 
F 3 HOH B 36 336 2 HOH HOH . 
F 3 HOH B 37 337 106 HOH HOH . 
F 3 HOH B 38 338 55 HOH HOH . 
F 3 HOH B 39 339 88 HOH HOH . 
F 3 HOH B 40 340 98 HOH HOH . 
F 3 HOH B 41 341 73 HOH HOH . 
F 3 HOH B 42 342 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 TKS . . . D 2 -9.745 -28.213 -12.565 1 42.35 ? C10 TKS 201 B 1 
HETATM 2 C C12 TKS . . . D 2 -7.985 -27.717 -10.762 1 47.03 ? C12 TKS 201 B 1 
HETATM 3 C C13 TKS . . . D 2 -8.495 -26.296 -10.925 1 42.74 ? C13 TKS 201 B 1 
HETATM 4 C C15 TKS . . . D 2 -12.917 -24.759 -13.79 1 41.18 ? C15 TKS 201 B 1 
HETATM 5 C C11 TKS . . . D 2 -8.416 -28.581 -11.932 1 47.19 ? C11 TKS 201 B 1 
HETATM 6 C C14 TKS . . . D 2 -10.005 -26.26 -10.87 1 43.12 ? C14 TKS 201 B 1 
HETATM 7 C C17 TKS . . . D 2 -12.788 -22.783 -15.323 1 30.57 ? C17 TKS 201 B 1 
HETATM 8 C C18 TKS . . . D 2 -13.548 -21.507 -14.976 1 34.67 ? C18 TKS 201 B 1 
HETATM 9 C C20 TKS . . . D 2 -15.601 -20.578 -13.94 1 36.7 ? C20 TKS 201 B 1 
HETATM 10 C C22 TKS . . . D 2 -17.214 -22.218 -14.643 1 35.52 ? C22 TKS 201 B 1 
HETATM 11 C C23 TKS . . . D 2 -15.782 -22.695 -14.977 1 39.17 ? C23 TKS 201 B 1 
HETATM 12 C C25 TKS . . . D 2 -11.551 -22.415 -16.162 1 29.12 ? C25 TKS 201 B 1 
HETATM 13 C C29 TKS . . . D 2 -18.832 -25.471 -8.959 1 54.68 ? C29 TKS 201 B 1 
HETATM 14 C C01 TKS . . . D 2 -17.656 -27.623 -9.478 1 60.79 ? C01 TKS 201 B 1 
HETATM 15 C C02 TKS . . . D 2 -17.476 -26.141 -9.155 1 57.65 ? C02 TKS 201 B 1 
HETATM 16 C C03 TKS . . . D 2 -16.744 -25.508 -10.346 1 50.72 ? C03 TKS 201 B 1 
HETATM 17 C C05 TKS . . . D 2 -14.558 -25.509 -11.203 1 45.92 ? C05 TKS 201 B 1 
HETATM 18 C C07 TKS . . . D 2 -12.469 -25.503 -12.53 1 42.84 ? C07 TKS 201 B 1 
HETATM 19 C C08 TKS . . . D 2 -11.375 -26.469 -12.965 1 35.08 ? C08 TKS 201 B 1 
HETATM 20 C C09 TKS . . . D 2 -10.649 -27.228 -11.828 1 37.32 ? C09 TKS 201 B 1 
HETATM 21 C C19 TKS . . . D 2 -14.829 -21.792 -14.203 1 33.44 ? C19 TKS 201 B 1 
HETATM 22 C C30 TKS . . . D 2 -16.633 -25.98 -7.882 1 65.78 ? C30 TKS 201 B 1 
HETATM 23 C C31 TKS . . . D 2 -16.091 -24.74 -7.572 1 65.47 ? C31 TKS 201 B 1 
HETATM 24 C C32 TKS . . . D 2 -15.325 -24.579 -6.428 1 71.55 ? C32 TKS 201 B 1 
HETATM 25 C C34 TKS . . . D 2 -15.1 -25.654 -5.581 1 75.83 ? C34 TKS 201 B 1 
HETATM 26 C C35 TKS . . . D 2 -15.641 -26.893 -5.885 1 76.51 ? C35 TKS 201 B 1 
HETATM 27 C C36 TKS . . . D 2 -16.406 -27.055 -7.03 1 73.44 ? C36 TKS 201 B 1 
HETATM 28 N N06 TKS . . . D 2 -13.572 -26.236 -11.968 1 44.02 ? N06 TKS 201 B 1 
HETATM 29 N N16 TKS . . . D 2 -12.356 -23.464 -14.114 1 39 ? N16 TKS 201 B 1 
HETATM 30 N N21 TKS . . . D 2 -17.059 -20.861 -14.202 1 38.56 ? N21 TKS 201 B 1 
HETATM 31 O O04 TKS . . . D 2 -15.564 -26.23 -10.551 1 46.47 ? O04 TKS 201 B 1 
HETATM 32 O O24 TKS . . . D 2 -15.174 -19.543 -13.557 1 41.21 ? O24 TKS 201 B 1 
HETATM 33 O O26 TKS . . . D 2 -10.998 -23.576 -16.693 1 31.86 ? O26 TKS 201 B 1 
HETATM 34 O O27 TKS . . . D 2 -13.715 -25.261 -14.518 1 36.94 ? O27 TKS 201 B 1 
HETATM 35 O O28 TKS . . . D 2 -14.513 -24.32 -11.133 1 40.49 ? O28 TKS 201 B 1 
HETATM 36 CL CL3 TKS . . . D 2 -14.633 -22.976 -6.047 1 76.27 ? CL3 TKS 201 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           36 
#