data_6W6Z # _model_server_result.job_id CMBLWPxcGoKacRZDQyndMQ _model_server_result.datetime_utc '2024-12-04 15:42:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6W6Z # _exptl.entry_id 6W6Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.57 _cell.angle_gamma 90 _cell.entry_id 6W6Z _cell.length_a 92.873 _cell.length_b 37.438 _cell.length_c 49.269 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W6Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 6W6Z _atom_sites.fract_transf_matrix[1][1] 0.010767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003203 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026711 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 201 1 FMN FMN . C 3 HOH A 1 301 102 HOH HOH . C 3 HOH A 2 302 90 HOH HOH . C 3 HOH A 3 303 39 HOH HOH . C 3 HOH A 4 304 48 HOH HOH . C 3 HOH A 5 305 59 HOH HOH . C 3 HOH A 6 306 46 HOH HOH . C 3 HOH A 7 307 88 HOH HOH . C 3 HOH A 8 308 34 HOH HOH . C 3 HOH A 9 309 91 HOH HOH . C 3 HOH A 10 310 47 HOH HOH . C 3 HOH A 11 311 21 HOH HOH . C 3 HOH A 12 312 45 HOH HOH . C 3 HOH A 13 313 64 HOH HOH . C 3 HOH A 14 314 57 HOH HOH . C 3 HOH A 15 315 54 HOH HOH . C 3 HOH A 16 316 12 HOH HOH . C 3 HOH A 17 317 38 HOH HOH . C 3 HOH A 18 318 24 HOH HOH . C 3 HOH A 19 319 26 HOH HOH . C 3 HOH A 20 320 3 HOH HOH . C 3 HOH A 21 321 15 HOH HOH . C 3 HOH A 22 322 93 HOH HOH . C 3 HOH A 23 323 18 HOH HOH . C 3 HOH A 24 324 28 HOH HOH . C 3 HOH A 25 325 37 HOH HOH . C 3 HOH A 26 326 79 HOH HOH . C 3 HOH A 27 327 5 HOH HOH . C 3 HOH A 28 328 1 HOH HOH . C 3 HOH A 29 329 44 HOH HOH . C 3 HOH A 30 330 72 HOH HOH . C 3 HOH A 31 331 16 HOH HOH . C 3 HOH A 32 332 89 HOH HOH . C 3 HOH A 33 333 19 HOH HOH . C 3 HOH A 34 334 98 HOH HOH . C 3 HOH A 35 335 75 HOH HOH . C 3 HOH A 36 336 23 HOH HOH . C 3 HOH A 37 337 67 HOH HOH . C 3 HOH A 38 338 84 HOH HOH . C 3 HOH A 39 339 52 HOH HOH . C 3 HOH A 40 340 7 HOH HOH . C 3 HOH A 41 341 103 HOH HOH . C 3 HOH A 42 342 109 HOH HOH . C 3 HOH A 43 343 49 HOH HOH . C 3 HOH A 44 344 81 HOH HOH . C 3 HOH A 45 345 50 HOH HOH . C 3 HOH A 46 346 36 HOH HOH . C 3 HOH A 47 347 4 HOH HOH . C 3 HOH A 48 348 61 HOH HOH . C 3 HOH A 49 349 8 HOH HOH . C 3 HOH A 50 350 42 HOH HOH . C 3 HOH A 51 351 25 HOH HOH . C 3 HOH A 52 352 78 HOH HOH . C 3 HOH A 53 353 10 HOH HOH . C 3 HOH A 54 354 85 HOH HOH . C 3 HOH A 55 355 35 HOH HOH . C 3 HOH A 56 356 11 HOH HOH . C 3 HOH A 57 357 51 HOH HOH . C 3 HOH A 58 358 2 HOH HOH . C 3 HOH A 59 359 105 HOH HOH . C 3 HOH A 60 360 82 HOH HOH . C 3 HOH A 61 361 27 HOH HOH . C 3 HOH A 62 362 86 HOH HOH . C 3 HOH A 63 363 6 HOH HOH . C 3 HOH A 64 364 96 HOH HOH . C 3 HOH A 65 365 108 HOH HOH . C 3 HOH A 66 366 106 HOH HOH . C 3 HOH A 67 367 56 HOH HOH . C 3 HOH A 68 368 41 HOH HOH . C 3 HOH A 69 369 87 HOH HOH . C 3 HOH A 70 370 13 HOH HOH . C 3 HOH A 71 371 58 HOH HOH . C 3 HOH A 72 372 22 HOH HOH . C 3 HOH A 73 373 107 HOH HOH . C 3 HOH A 74 374 20 HOH HOH . C 3 HOH A 75 375 92 HOH HOH . C 3 HOH A 76 376 9 HOH HOH . C 3 HOH A 77 377 80 HOH HOH . C 3 HOH A 78 378 68 HOH HOH . C 3 HOH A 79 379 14 HOH HOH . C 3 HOH A 80 380 104 HOH HOH . C 3 HOH A 81 381 60 HOH HOH . C 3 HOH A 82 382 33 HOH HOH . C 3 HOH A 83 383 99 HOH HOH . C 3 HOH A 84 384 95 HOH HOH . C 3 HOH A 85 385 101 HOH HOH . C 3 HOH A 86 386 100 HOH HOH . C 3 HOH A 87 387 74 HOH HOH . C 3 HOH A 88 388 29 HOH HOH . C 3 HOH A 89 389 73 HOH HOH . C 3 HOH A 90 390 97 HOH HOH . C 3 HOH A 91 391 40 HOH HOH . C 3 HOH A 92 392 83 HOH HOH . C 3 HOH A 93 393 43 HOH HOH . C 3 HOH A 94 394 63 HOH HOH . C 3 HOH A 95 395 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 -12.024 -9.76 10.505 1 20.53 ? N1 FMN 201 A 1 HETATM 2 C C2 FMN . . . B 2 -12.217 -10.046 9.206 1 23.19 ? C2 FMN 201 A 1 HETATM 3 O O2 FMN . . . B 2 -11.509 -9.419 8.355 1 22.76 ? O2 FMN 201 A 1 HETATM 4 N N3 FMN . . . B 2 -13.025 -11.051 8.807 1 20.03 ? N3 FMN 201 A 1 HETATM 5 C C4 FMN . . . B 2 -13.753 -11.783 9.665 1 20.24 ? C4 FMN 201 A 1 HETATM 6 O O4 FMN . . . B 2 -14.518 -12.674 9.305 1 19.85 ? O4 FMN 201 A 1 HETATM 7 C C4A FMN . . . B 2 -13.643 -11.484 11.087 1 18.76 ? C4A FMN 201 A 1 HETATM 8 N N5 FMN . . . B 2 -14.326 -12.127 12.011 1 18.16 ? N5 FMN 201 A 1 HETATM 9 C C5A FMN . . . B 2 -14.1 -11.823 13.314 1 18.46 ? C5A FMN 201 A 1 HETATM 10 C C6 FMN . . . B 2 -14.831 -12.504 14.261 1 17.64 ? C6 FMN 201 A 1 HETATM 11 C C7 FMN . . . B 2 -14.626 -12.266 15.609 1 19.16 ? C7 FMN 201 A 1 HETATM 12 C C7M FMN . . . B 2 -15.466 -13.03 16.585 1 18.43 ? C7M FMN 201 A 1 HETATM 13 C C8 FMN . . . B 2 -13.746 -11.175 16.063 1 17.95 ? C8 FMN 201 A 1 HETATM 14 C C8M FMN . . . B 2 -13.608 -10.925 17.558 1 18.66 ? C8M FMN 201 A 1 HETATM 15 C C9 FMN . . . B 2 -13.011 -10.497 15.105 1 18.75 ? C9 FMN 201 A 1 HETATM 16 C C9A FMN . . . B 2 -13.197 -10.764 13.754 1 19.37 ? C9A FMN 201 A 1 HETATM 17 N N10 FMN . . . B 2 -12.526 -10.056 12.764 1 19.94 ? N10 FMN 201 A 1 HETATM 18 C C10 FMN . . . B 2 -12.714 -10.418 11.445 1 19.66 ? C10 FMN 201 A 1 HETATM 19 C C1' FMN . . . B 2 -11.581 -8.928 13.064 1 23.39 ? C1' FMN 201 A 1 HETATM 20 C C2' FMN . . . B 2 -10.107 -9.264 13.088 1 25.96 ? C2' FMN 201 A 1 HETATM 21 O O2' FMN . . . B 2 -9.819 -9.971 14.305 1 24.35 ? O2' FMN 201 A 1 HETATM 22 C C3' FMN . . . B 2 -9.318 -7.929 13.049 1 34.49 ? C3' FMN 201 A 1 HETATM 23 O O3' FMN . . . B 2 -9.852 -6.972 13.971 1 31.72 ? O3' FMN 201 A 1 HETATM 24 C C4' FMN . . . B 2 -9.394 -7.222 11.711 1 40.5 ? C4' FMN 201 A 1 HETATM 25 O O4' FMN . . . B 2 -8.987 -8.128 10.66 1 44.82 ? O4' FMN 201 A 1 HETATM 26 C C5' FMN . . . B 2 -8.45 -5.994 11.689 1 52.21 ? C5' FMN 201 A 1 HETATM 27 O O5' FMN . . . B 2 -7.057 -6.338 11.85 1 56.75 ? O5' FMN 201 A 1 HETATM 28 P P FMN . . . B 2 -5.834 -5.237 11.774 1 61.03 ? P FMN 201 A 1 HETATM 29 O O1P FMN . . . B 2 -5.626 -4.856 13.228 1 66.53 ? O1P FMN 201 A 1 HETATM 30 O O2P FMN . . . B 2 -4.723 -6.057 11.142 1 61.78 ? O2P FMN 201 A 1 HETATM 31 O O3P FMN . . . B 2 -6.315 -4.071 10.929 1 65.04 ? O3P FMN 201 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #