data_6W74 # _model_server_result.job_id dlclG_scbIYfhhdx8lBJ0w _model_server_result.datetime_utc '2024-10-19 03:45:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6W74 # _exptl.entry_id 6W74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1180.341 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '14-{[(3S)-2-(N-methyl-L-alanyl-3-methyl-L-valyl)-3-{[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]carbamoyl}-1,2,3,4-tetrahydroisoquinolin-7-yl]oxy}-3,6,9,12-tetraoxatetradecan-1-yl (3R)-3-{5-amino-4-carbamoyl-3-[4-(2,4-difluorophenoxy)phenyl]-1H-pyrazol-1-yl}piperidine-1-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.7 _cell.angle_gamma 90 _cell.entry_id 6W74 _cell.length_a 49.037 _cell.length_b 33.651 _cell.length_c 57.61 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 53 A CYS 306 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc2 A SG CYS 56 A CYS 309 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc3 A NE2 HIS 73 A HIS 326 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc4 A SG CYS 80 A CYS 333 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? # _chem_comp.formula 'C62 H79 F2 N9 O12' _chem_comp.formula_weight 1180.341 _chem_comp.id TKY _chem_comp.mon_nstd_flag . _chem_comp.name '14-{[(3S)-2-(N-methyl-L-alanyl-3-methyl-L-valyl)-3-{[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]carbamoyl}-1,2,3,4-tetrahydroisoquinolin-7-yl]oxy}-3,6,9,12-tetraoxatetradecan-1-yl (3R)-3-{5-amino-4-carbamoyl-3-[4-(2,4-difluorophenoxy)phenyl]-1H-pyrazol-1-yl}piperidine-1-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C52 C53 TKY sing 306 n n C52 C51 TKY sing 307 n n C36 C37 TKY sing 308 n n C36 O35 TKY sing 309 n n C37 O38 TKY sing 310 n n C53 C54 TKY sing 311 n n C43 C42 TKY sing 312 n n C43 O44 TKY sing 313 n n C51 N50 TKY sing 314 n n C42 O41 TKY sing 315 n n O35 C34 TKY sing 316 n n O38 C39 TKY sing 317 n n C15 C14 TKY doub 318 n y C15 C16 TKY sing 319 n y C14 C13 TKY sing 320 n y C34 C33 TKY sing 321 n n O49 C48 TKY doub 322 n n C54 N56 TKY sing 323 n n C54 C55 TKY sing 324 n n O41 C40 TKY sing 325 n n O32 C13 TKY sing 326 n n O32 C33 TKY sing 327 n n C16 C17 TKY sing 328 n n C16 C11 TKY doub 329 n y O44 C45 TKY sing 330 n n C17 C18 TKY sing 331 n n C13 C12 TKY doub 332 n y N56 N60 TKY sing 333 n y N56 C57 TKY sing 334 n y N50 C48 TKY sing 335 n n N50 C55 TKY sing 336 n n C66 C65 TKY doub 337 n y C66 C61 TKY sing 338 n y N79 C57 TKY sing 339 n n C48 O47 TKY sing 340 n n N60 C59 TKY doub 341 n y C57 C58 TKY doub 342 n y C65 C64 TKY sing 343 n y C39 C40 TKY sing 344 n n O77 C76 TKY doub 345 n n C11 C12 TKY sing 346 n y C11 C10 TKY sing 347 n n C59 C58 TKY sing 348 n y C59 C61 TKY sing 349 n n C58 C76 TKY sing 350 n n F74 C73 TKY sing 351 n n C61 C62 TKY doub 352 n y C76 N78 TKY sing 353 n n C45 C46 TKY sing 354 n n C10 N9 TKY sing 355 n n C64 O67 TKY sing 356 n n C64 C63 TKY doub 357 n y O47 C46 TKY sing 358 n n C18 N9 TKY sing 359 n n C18 C19 TKY sing 360 n n O67 C68 TKY sing 361 n n C24 C25 TKY sing 362 n n C24 C23 TKY sing 363 n n C62 C63 TKY sing 364 n y N9 C7 TKY sing 365 n n C25 C26 TKY sing 366 n n C73 C68 TKY doub 367 n y C73 C72 TKY sing 368 n y N21 C19 TKY sing 369 n n N21 C22 TKY sing 370 n n O4 C3 TKY doub 371 n n C19 O20 TKY doub 372 n n C68 C69 TKY sing 373 n y C23 C22 TKY sing 374 n n C26 C31 TKY doub 375 n y C26 C27 TKY sing 376 n y C31 C30 TKY sing 377 n y C1 C2 TKY sing 378 n n C7 O8 TKY doub 379 n n C7 C6 TKY sing 380 n n C72 C71 TKY doub 381 n y C22 C27 TKY sing 382 n n C3 C2 TKY sing 383 n n C3 N5 TKY sing 384 n n C27 C28 TKY doub 385 n y C30 C29 TKY doub 386 n y C6 N5 TKY sing 387 n n C6 C80 TKY sing 388 n n N84 C2 TKY sing 389 n n N84 C85 TKY sing 390 n n C69 C70 TKY doub 391 n y C28 C29 TKY sing 392 n y C71 C70 TKY sing 393 n y C71 F75 TKY sing 394 n n C82 C80 TKY sing 395 n n C80 C83 TKY sing 396 n n C80 C81 TKY sing 397 n n C43 H1 TKY sing 398 n n C43 H2 TKY sing 399 n n C40 H3 TKY sing 400 n n C40 H4 TKY sing 401 n n C36 H5 TKY sing 402 n n C36 H6 TKY sing 403 n n C33 H7 TKY sing 404 n n C33 H8 TKY sing 405 n n C37 H9 TKY sing 406 n n C37 H10 TKY sing 407 n n C34 H11 TKY sing 408 n n C34 H12 TKY sing 409 n n C6 H13 TKY sing 410 n n N5 H14 TKY sing 411 n n C18 H15 TKY sing 412 n n C1 H16 TKY sing 413 n n C1 H17 TKY sing 414 n n C1 H18 TKY sing 415 n n C10 H19 TKY sing 416 n n C10 H20 TKY sing 417 n n C12 H21 TKY sing 418 n n C14 H22 TKY sing 419 n n C15 H23 TKY sing 420 n n C17 H24 TKY sing 421 n n C17 H25 TKY sing 422 n n C2 H26 TKY sing 423 n n C22 H27 TKY sing 424 n n C23 H28 TKY sing 425 n n C23 H29 TKY sing 426 n n C24 H30 TKY sing 427 n n C24 H31 TKY sing 428 n n C25 H32 TKY sing 429 n n C25 H33 TKY sing 430 n n C28 H34 TKY sing 431 n n C29 H35 TKY sing 432 n n C30 H36 TKY sing 433 n n C31 H37 TKY sing 434 n n C39 H38 TKY sing 435 n n C39 H39 TKY sing 436 n n C42 H40 TKY sing 437 n n C42 H41 TKY sing 438 n n C45 H42 TKY sing 439 n n C45 H43 TKY sing 440 n n C46 H44 TKY sing 441 n n C46 H45 TKY sing 442 n n C51 H46 TKY sing 443 n n C51 H47 TKY sing 444 n n C52 H48 TKY sing 445 n n C52 H49 TKY sing 446 n n C53 H50 TKY sing 447 n n C53 H51 TKY sing 448 n n C54 H52 TKY sing 449 n n C55 H53 TKY sing 450 n n C55 H54 TKY sing 451 n n C62 H55 TKY sing 452 n n C63 H56 TKY sing 453 n n C65 H57 TKY sing 454 n n C66 H58 TKY sing 455 n n C69 H59 TKY sing 456 n n C70 H60 TKY sing 457 n n C72 H61 TKY sing 458 n n C81 H62 TKY sing 459 n n C81 H63 TKY sing 460 n n C81 H64 TKY sing 461 n n C82 H65 TKY sing 462 n n C82 H66 TKY sing 463 n n C82 H67 TKY sing 464 n n C83 H68 TKY sing 465 n n C83 H69 TKY sing 466 n n C83 H70 TKY sing 467 n n C85 H71 TKY sing 468 n n C85 H72 TKY sing 469 n n C85 H73 TKY sing 470 n n N21 H74 TKY sing 471 n n N78 H75 TKY sing 472 n n N78 H76 TKY sing 473 n n N79 H77 TKY sing 474 n n N79 H78 TKY sing 475 n n N84 H79 TKY sing 476 n n # _atom_sites.entry_id 6W74 _atom_sites.fract_transf_matrix[1][1] 0.020393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005732 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018031 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 401 ZN ZN . C 3 TKY A 1 402 501 TKY PFE . D 4 HOH A 1 501 22 HOH HOH . D 4 HOH A 2 502 51 HOH HOH . D 4 HOH A 3 503 6 HOH HOH . D 4 HOH A 4 504 2 HOH HOH . D 4 HOH A 5 505 28 HOH HOH . D 4 HOH A 6 506 44 HOH HOH . D 4 HOH A 7 507 27 HOH HOH . D 4 HOH A 8 508 20 HOH HOH . D 4 HOH A 9 509 4 HOH HOH . D 4 HOH A 10 510 49 HOH HOH . D 4 HOH A 11 511 23 HOH HOH . D 4 HOH A 12 512 35 HOH HOH . D 4 HOH A 13 513 52 HOH HOH . D 4 HOH A 14 514 12 HOH HOH . D 4 HOH A 15 515 18 HOH HOH . D 4 HOH A 16 516 25 HOH HOH . D 4 HOH A 17 517 1 HOH HOH . D 4 HOH A 18 518 11 HOH HOH . D 4 HOH A 19 519 33 HOH HOH . D 4 HOH A 20 520 15 HOH HOH . D 4 HOH A 21 521 5 HOH HOH . D 4 HOH A 22 522 14 HOH HOH . D 4 HOH A 23 523 32 HOH HOH . D 4 HOH A 24 524 40 HOH HOH . D 4 HOH A 25 525 31 HOH HOH . D 4 HOH A 26 526 9 HOH HOH . D 4 HOH A 27 527 3 HOH HOH . D 4 HOH A 28 528 46 HOH HOH . D 4 HOH A 29 529 39 HOH HOH . D 4 HOH A 30 530 43 HOH HOH . D 4 HOH A 31 531 8 HOH HOH . D 4 HOH A 32 532 19 HOH HOH . D 4 HOH A 33 533 34 HOH HOH . D 4 HOH A 34 534 13 HOH HOH . D 4 HOH A 35 535 26 HOH HOH . D 4 HOH A 36 536 42 HOH HOH . D 4 HOH A 37 537 36 HOH HOH . D 4 HOH A 38 538 41 HOH HOH . D 4 HOH A 39 539 37 HOH HOH . D 4 HOH A 40 540 16 HOH HOH . D 4 HOH A 41 541 45 HOH HOH . D 4 HOH A 42 542 7 HOH HOH . D 4 HOH A 43 543 50 HOH HOH . D 4 HOH A 44 544 24 HOH HOH . D 4 HOH A 45 545 21 HOH HOH . D 4 HOH A 46 546 10 HOH HOH . D 4 HOH A 47 547 17 HOH HOH . D 4 HOH A 48 548 38 HOH HOH . D 4 HOH A 49 549 48 HOH HOH . D 4 HOH A 50 550 47 HOH HOH . D 4 HOH A 51 551 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C33 TKY . . . C 3 73.725 4.423 8.004 1 80.34 ? C33 TKY 402 A 1 HETATM 2 C C7 TKY . . . C 3 68.214 6.208 12.506 1 54.03 ? C7 TKY 402 A 1 HETATM 3 C C6 TKY . . . C 3 68.712 7.636 12.236 1 50.64 ? C6 TKY 402 A 1 HETATM 4 C C13 TKY . . . C 3 71.726 3.272 8.693 1 75.35 ? C13 TKY 402 A 1 HETATM 5 N N5 TKY . . . C 3 67.706 8.552 12.757 1 46.73 ? N5 TKY 402 A 1 HETATM 6 C C18 TKY . . . C 3 68.034 3.871 11.951 1 60.34 ? C18 TKY 402 A 1 HETATM 7 C C16 TKY . . . C 3 69.229 3.045 9.926 1 67.86 ? C16 TKY 402 A 1 HETATM 8 C C19 TKY . . . C 3 68.888 3.305 13.096 1 58.99 ? C19 TKY 402 A 1 HETATM 9 C C26 TKY . . . C 3 68.026 -0.038 16.469 1 60.77 ? C26 TKY 402 A 1 HETATM 10 C C1 TKY . . . C 3 64.768 9.599 13.277 1 35.89 ? C1 TKY 402 A 1 HETATM 11 C C10 TKY . . . C 3 69.078 5.514 10.286 1 62.66 ? C10 TKY 402 A 1 HETATM 12 C C11 TKY . . . C 3 69.81 4.307 9.752 1 67.6 ? C11 TKY 402 A 1 HETATM 13 C C12 TKY . . . C 3 71.06 4.409 9.138 1 72.04 ? C12 TKY 402 A 1 HETATM 14 C C14 TKY . . . C 3 71.137 2.023 8.841 1 74.51 ? C14 TKY 402 A 1 HETATM 15 C C15 TKY . . . C 3 69.9 1.917 9.455 1 72.42 ? C15 TKY 402 A 1 HETATM 16 C C17 TKY . . . C 3 67.941 2.977 10.706 1 63.83 ? C17 TKY 402 A 1 HETATM 17 C C2 TKY . . . C 3 66.053 10.336 12.921 1 39.07 ? C2 TKY 402 A 1 HETATM 18 C C22 TKY . . . C 3 69.116 1.435 14.692 1 58.25 ? C22 TKY 402 A 1 HETATM 19 C C23 TKY . . . C 3 69.577 0.153 14.006 1 57.39 ? C23 TKY 402 A 1 HETATM 20 C C24 TKY . . . C 3 69.89 -0.946 15.018 1 59.64 ? C24 TKY 402 A 1 HETATM 21 C C25 TKY . . . C 3 68.664 -1.267 15.865 1 60.92 ? C25 TKY 402 A 1 HETATM 22 C C27 TKY . . . C 3 68.228 1.237 15.91 1 59.77 ? C27 TKY 402 A 1 HETATM 23 C C28 TKY . . . C 3 67.552 2.329 16.455 1 57.07 ? C28 TKY 402 A 1 HETATM 24 C C29 TKY . . . C 3 66.674 2.166 17.514 1 55.54 ? C29 TKY 402 A 1 HETATM 25 C C3 TKY . . . C 3 66.964 9.439 12.083 1 42.67 ? C3 TKY 402 A 1 HETATM 26 C C30 TKY . . . C 3 66.483 0.919 18.065 1 56.73 ? C30 TKY 402 A 1 HETATM 27 C C31 TKY . . . C 3 67.163 -0.174 17.556 1 58.86 ? C31 TKY 402 A 1 HETATM 28 C C80 TKY . . . C 3 70.139 7.94 12.799 1 49.5 ? C80 TKY 402 A 1 HETATM 29 C C81 TKY . . . C 3 70.514 9.385 12.462 1 49.64 ? C81 TKY 402 A 1 HETATM 30 C C82 TKY . . . C 3 70.193 7.768 14.319 1 47.49 ? C82 TKY 402 A 1 HETATM 31 C C83 TKY . . . C 3 71.198 7.026 12.177 1 50.29 ? C83 TKY 402 A 1 HETATM 32 C C85 TKY . . . C 3 66.742 12.648 12.34 1 44.07 ? C85 TKY 402 A 1 HETATM 33 N N21 TKY . . . C 3 68.415 2.181 13.649 1 58.05 ? N21 TKY 402 A 1 HETATM 34 N N84 TKY . . . C 3 65.727 11.598 12.247 1 41.01 ? N84 TKY 402 A 1 HETATM 35 N N9 TKY . . . C 3 68.435 5.243 11.587 1 58.69 ? N9 TKY 402 A 1 HETATM 36 O O20 TKY . . . C 3 69.921 3.861 13.47 1 57.97 ? O20 TKY 402 A 1 HETATM 37 O O32 TKY . . . C 3 72.978 3.211 8.134 1 78.91 ? O32 TKY 402 A 1 HETATM 38 O O4 TKY . . . C 3 67.023 9.577 10.864 1 43.64 ? O4 TKY 402 A 1 HETATM 39 O O8 TKY . . . C 3 67.639 5.966 13.555 1 53.5 ? O8 TKY 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 39 #