data_6W7C # _model_server_result.job_id 9hqBHbey2MUH-IPbn-LZpw _model_server_result.datetime_utc '2024-11-23 01:00:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w7c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":403}' # _entry.id 6W7C # _exptl.entry_id 6W7C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.229 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W7C _cell.length_a 66.501 _cell.length_b 123.014 _cell.length_c 125.848 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W7C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 93 1_555 B SG CYS 74 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 A O THR 123 A THR 142 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? metalc ? metalc2 A OG1 THR 123 A THR 142 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? metalc ? metalc3 A O THR 123 A THR 142 1_555 L K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? metalc ? metalc4 A O ILE 124 A ILE 143 1_555 L K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc5 A O THR 232 A THR 251 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.792 ? metalc ? metalc6 A OG1 THR 232 A THR 251 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? metalc ? metalc7 A O THR 232 A THR 251 1_555 L K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.066 ? metalc ? metalc8 A OE2 GLU 290 A GLU 309 1_555 C CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc9 J K K . A K 408 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.25 ? metalc ? metalc10 J K K . A K 408 1_555 B OG1 THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.175 ? metalc ? metalc11 J K K . A K 408 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc12 J K K . A K 408 1_555 B OG1 THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc13 L K K . A K 410 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc14 L K K . A K 410 1_555 B O ILE 124 B ILE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc15 L K K . A K 410 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.272 ? metalc ? metalc16 L K K . A K 410 1_555 B O ILE 233 B ILE 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 348 n n C1 H11 OCT sing 349 n n C1 H12 OCT sing 350 n n C1 H13 OCT sing 351 n n C2 C3 OCT sing 352 n n C2 H21 OCT sing 353 n n C2 H22 OCT sing 354 n n C3 C4 OCT sing 355 n n C3 H31 OCT sing 356 n n C3 H32 OCT sing 357 n n C4 C5 OCT sing 358 n n C4 H41 OCT sing 359 n n C4 H42 OCT sing 360 n n C5 C6 OCT sing 361 n n C5 H51 OCT sing 362 n n C5 H52 OCT sing 363 n n C6 C7 OCT sing 364 n n C6 H61 OCT sing 365 n n C6 H62 OCT sing 366 n n C7 C8 OCT sing 367 n n C7 H71 OCT sing 368 n n C7 H72 OCT sing 369 n n C8 H81 OCT sing 370 n n C8 H82 OCT sing 371 n n C8 H83 OCT sing 372 n n # _atom_sites.entry_id 6W7C _atom_sites.fract_transf_matrix[1][1] 0.015037 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008129 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 401 1 CD CD . D 2 CD A 1 402 2 CD CD . E 3 D12 A 1 403 2 D12 D12 . F 3 D12 A 1 404 3 D12 D12 . G 4 R16 A 1 405 1 R16 R16 . H 5 B7G A 1 406 1 B7G B7G . I 5 B7G A 1 407 2 B7G B7G . J 6 K A 1 408 2 K K . K 6 K A 1 409 3 K K . L 6 K A 1 410 1 K K . M 2 CD B 1 401 3 CD CD . N 3 D12 B 1 402 1 D12 D12 . O 7 OCT B 1 403 1 OCT OCT . P 8 D10 B 1 404 1 D10 D10 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . O 7 -0.265 -9.172 -48.008 1 129 ? C1 OCT 403 B 1 HETATM 2 C C2 OCT . . . O 7 0.192 -10.619 -47.831 1 129.1 ? C2 OCT 403 B 1 HETATM 3 C C3 OCT . . . O 7 0.658 -11.181 -49.173 1 129 ? C3 OCT 403 B 1 HETATM 4 C C4 OCT . . . O 7 1.273 -12.564 -48.965 1 129.37 ? C4 OCT 403 B 1 HETATM 5 C C5 OCT . . . O 7 0.191 -13.637 -49.083 1 130.71 ? C5 OCT 403 B 1 HETATM 6 C C6 OCT . . . O 7 0.583 -14.863 -48.259 1 132.32 ? C6 OCT 403 B 1 HETATM 7 C C7 OCT . . . O 7 0.745 -16.079 -49.171 1 133.76 ? C7 OCT 403 B 1 HETATM 8 C C8 OCT . . . O 7 2.085 -16.002 -49.9 1 134.72 ? C8 OCT 403 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #