data_6W7E # _model_server_result.job_id YAVRPuhbxKS9KiVGlyuafQ _model_server_result.datetime_utc '2024-11-13 07:59:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":408}' # _entry.id 6W7E # _exptl.entry_id 6W7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W7E _cell.length_a 67.368 _cell.length_b 122.534 _cell.length_c 126.552 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id Q _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 93 1_555 B SG CYS 74 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A O THR 123 A THR 142 1_555 H K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc2 A O THR 123 A THR 142 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.19 ? metalc ? metalc3 A OG1 THR 123 A THR 142 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.284 ? metalc ? metalc4 A O ILE 124 A ILE 143 1_555 H K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.977 ? metalc ? metalc5 A O THR 232 A THR 251 1_555 H K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? metalc ? metalc6 A O THR 232 A THR 251 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc7 A OG1 THR 232 A THR 251 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.307 ? metalc ? metalc8 A O ILE 233 A ILE 252 1_555 H K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc9 H K K . A K 406 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc10 H K K . A K 406 1_555 B O ILE 124 B ILE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.001 ? metalc ? metalc11 H K K . A K 406 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? metalc ? metalc12 H K K . A K 406 1_555 B O ILE 233 B ILE 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc13 B O THR 123 B THR 142 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.136 ? metalc ? metalc14 B OG1 THR 123 B THR 142 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.044 ? metalc ? metalc15 B O THR 232 B THR 251 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc16 B OG1 THR 232 B THR 251 1_555 P K K . B K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 486 n n C27 H271 R16 sing 487 n n C27 H272 R16 sing 488 n n C27 H273 R16 sing 489 n n C28 C29 R16 sing 490 n n C28 H281 R16 sing 491 n n C28 H282 R16 sing 492 n n C29 C30 R16 sing 493 n n C29 H291 R16 sing 494 n n C29 H292 R16 sing 495 n n C30 C31 R16 sing 496 n n C30 H301 R16 sing 497 n n C30 H302 R16 sing 498 n n C31 C32 R16 sing 499 n n C31 H311 R16 sing 500 n n C31 H312 R16 sing 501 n n C32 C33 R16 sing 502 n n C32 H321 R16 sing 503 n n C32 H322 R16 sing 504 n n C33 C34 R16 sing 505 n n C33 H331 R16 sing 506 n n C33 H332 R16 sing 507 n n C34 C35 R16 sing 508 n n C34 H341 R16 sing 509 n n C34 H342 R16 sing 510 n n C35 C36 R16 sing 511 n n C35 H351 R16 sing 512 n n C35 H352 R16 sing 513 n n C36 C37 R16 sing 514 n n C36 H361 R16 sing 515 n n C36 H362 R16 sing 516 n n C37 C38 R16 sing 517 n n C37 H371 R16 sing 518 n n C37 H372 R16 sing 519 n n C38 C39 R16 sing 520 n n C38 H381 R16 sing 521 n n C38 H382 R16 sing 522 n n C39 C40 R16 sing 523 n n C39 H391 R16 sing 524 n n C39 H392 R16 sing 525 n n C40 C41 R16 sing 526 n n C40 H401 R16 sing 527 n n C40 H402 R16 sing 528 n n C41 C42 R16 sing 529 n n C41 H411 R16 sing 530 n n C41 H412 R16 sing 531 n n C42 H421 R16 sing 532 n n C42 H422 R16 sing 533 n n C42 H423 R16 sing 534 n n # _atom_sites.entry_id 6W7E _atom_sites.fract_transf_matrix[1][1] 0.014844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 401 1 CD CD . D 2 CD A 1 402 3 CD CD . E 3 1PE A 1 403 1 1PE 1PE . F 4 LNK A 1 404 2 LNK LNK . G 5 OCT A 1 405 2 OCT OCT . H 6 K A 1 406 2 K K . I 7 PIO A 1 407 1 PIO PIO . J 2 CD B 1 401 2 CD CD . K 2 CD B 1 402 4 CD CD . L 4 LNK B 1 403 1 LNK LNK . M 5 OCT B 1 404 1 OCT OCT . N 5 OCT B 1 405 3 OCT OCT . O 8 D12 B 1 406 1 D12 D12 . P 6 K B 1 407 1 K K . Q 9 R16 B 1 408 1 R16 R16 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . Q 9 -7.879 -20.192 -6.906 1 230.79 ? C27 R16 408 B 1 HETATM 2 C C28 R16 . . . Q 9 -6.973 -19.422 -7.864 1 232.44 ? C28 R16 408 B 1 HETATM 3 C C29 R16 . . . Q 9 -5.566 -19.33 -7.276 1 229.09 ? C29 R16 408 B 1 HETATM 4 C C30 R16 . . . Q 9 -4.613 -18.78 -8.335 1 233.54 ? C30 R16 408 B 1 HETATM 5 C C31 R16 . . . Q 9 -3.313 -18.326 -7.675 1 236.05 ? C31 R16 408 B 1 HETATM 6 C C32 R16 . . . Q 9 -2.47 -17.563 -8.695 1 244.22 ? C32 R16 408 B 1 HETATM 7 C C33 R16 . . . Q 9 -1.315 -16.861 -7.983 1 250.32 ? C33 R16 408 B 1 HETATM 8 C C34 R16 . . . Q 9 -1.15 -15.455 -8.554 1 257.2 ? C34 R16 408 B 1 HETATM 9 C C35 R16 . . . Q 9 -0.19 -14.656 -7.675 1 266.35 ? C35 R16 408 B 1 HETATM 10 C C36 R16 . . . Q 9 -0.569 -13.177 -7.734 1 274.09 ? C36 R16 408 B 1 HETATM 11 C C37 R16 . . . Q 9 0.426 -12.36 -6.913 1 283.67 ? C37 R16 408 B 1 HETATM 12 C C38 R16 . . . Q 9 0.228 -10.877 -7.213 1 292.22 ? C38 R16 408 B 1 HETATM 13 C C39 R16 . . . Q 9 1.275 -10.062 -6.458 1 294.47 ? C39 R16 408 B 1 HETATM 14 C C40 R16 . . . Q 9 0.589 -9.217 -5.387 1 294.29 ? C40 R16 408 B 1 HETATM 15 C C41 R16 . . . Q 9 1.646 -8.471 -4.577 1 294.17 ? C41 R16 408 B 1 HETATM 16 C C42 R16 . . . Q 9 1.113 -7.094 -4.189 1 294.34 ? C42 R16 408 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #