data_6W82 # _model_server_result.job_id -V1gQY53QXBfmvmVqsR4Ug _model_server_result.datetime_utc '2024-11-05 10:52:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w82 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":403}' # _entry.id 6W82 # _exptl.entry_id 6W82 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W82 _cell.length_a 67.487 _cell.length_b 122.067 _cell.length_c 126.861 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W82 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 M N N ? 9 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 93 1_555 B SG CYS 74 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A O THR 123 A THR 142 1_555 I K K . A K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.256 ? metalc ? metalc2 A OG1 THR 123 A THR 142 1_555 I K K . A K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.282 ? metalc ? metalc3 A O THR 123 A THR 142 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc4 A O ILE 124 A ILE 143 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.792 ? metalc ? metalc5 A O THR 232 A THR 251 1_555 I K K . A K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc6 A OG1 THR 232 A THR 251 1_555 I K K . A K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc7 A O THR 232 A THR 251 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? metalc ? metalc8 A O ILE 233 A ILE 252 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc9 A NE2 HIS 294 A HIS 313 1_555 C CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc10 I K K . A K 407 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc11 I K K . A K 407 1_555 B OG1 THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.988 ? metalc ? metalc12 I K K . A K 407 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? metalc ? metalc13 I K K . A K 407 1_555 B OG1 THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.92 ? metalc ? metalc14 J K K . A K 408 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc15 J K K . A K 408 1_555 B O ILE 124 B ILE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc16 J K K . A K 408 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.257 ? metalc ? metalc17 J K K . A K 408 1_555 B O ILE 233 B ILE 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 429 n n C27 H271 R16 sing 430 n n C27 H272 R16 sing 431 n n C27 H273 R16 sing 432 n n C28 C29 R16 sing 433 n n C28 H281 R16 sing 434 n n C28 H282 R16 sing 435 n n C29 C30 R16 sing 436 n n C29 H291 R16 sing 437 n n C29 H292 R16 sing 438 n n C30 C31 R16 sing 439 n n C30 H301 R16 sing 440 n n C30 H302 R16 sing 441 n n C31 C32 R16 sing 442 n n C31 H311 R16 sing 443 n n C31 H312 R16 sing 444 n n C32 C33 R16 sing 445 n n C32 H321 R16 sing 446 n n C32 H322 R16 sing 447 n n C33 C34 R16 sing 448 n n C33 H331 R16 sing 449 n n C33 H332 R16 sing 450 n n C34 C35 R16 sing 451 n n C34 H341 R16 sing 452 n n C34 H342 R16 sing 453 n n C35 C36 R16 sing 454 n n C35 H351 R16 sing 455 n n C35 H352 R16 sing 456 n n C36 C37 R16 sing 457 n n C36 H361 R16 sing 458 n n C36 H362 R16 sing 459 n n C37 C38 R16 sing 460 n n C37 H371 R16 sing 461 n n C37 H372 R16 sing 462 n n C38 C39 R16 sing 463 n n C38 H381 R16 sing 464 n n C38 H382 R16 sing 465 n n C39 C40 R16 sing 466 n n C39 H391 R16 sing 467 n n C39 H392 R16 sing 468 n n C40 C41 R16 sing 469 n n C40 H401 R16 sing 470 n n C40 H402 R16 sing 471 n n C41 C42 R16 sing 472 n n C41 H411 R16 sing 473 n n C41 H412 R16 sing 474 n n C42 H421 R16 sing 475 n n C42 H422 R16 sing 476 n n C42 H423 R16 sing 477 n n # _atom_sites.entry_id 6W82 _atom_sites.fract_transf_matrix[1][1] 0.014818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008192 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007883 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 401 1 CD CD . D 3 OCT A 1 402 4 OCT OCT . E 4 D12 A 1 403 1 D12 D12 . F 4 D12 A 1 404 2 D12 D12 . G 5 D10 A 1 405 1 D10 D10 . H 6 B7G A 1 406 1 B7G B7G . I 7 K A 1 407 1 K K . J 7 K A 1 408 2 K K . K 3 OCT B 1 401 3 OCT OCT . L 8 LNK B 1 402 3 LNK LNK . M 9 R16 B 1 403 1 R16 R16 . N 9 R16 B 1 404 2 R16 R16 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . M 9 -4.661 -7.063 -50.673 1 119.83 ? C27 R16 403 B 1 HETATM 2 C C28 R16 . . . M 9 -4.771 -8.457 -51.282 1 130.25 ? C28 R16 403 B 1 HETATM 3 C C29 R16 . . . M 9 -5.318 -9.449 -50.256 1 143.14 ? C29 R16 403 B 1 HETATM 4 C C30 R16 . . . M 9 -5.186 -10.88 -50.78 1 153.43 ? C30 R16 403 B 1 HETATM 5 C C31 R16 . . . M 9 -3.734 -11.357 -50.667 1 153.55 ? C31 R16 403 B 1 HETATM 6 C C32 R16 . . . M 9 -3.606 -12.778 -51.231 1 144.27 ? C32 R16 403 B 1 HETATM 7 C C33 R16 . . . M 9 -4.233 -13.76 -50.249 1 148.96 ? C33 R16 403 B 1 HETATM 8 C C34 R16 . . . M 9 -3.719 -15.169 -50.581 1 150.78 ? C34 R16 403 B 1 HETATM 9 C C35 R16 . . . M 9 -3.294 -15.862 -49.297 1 156.49 ? C35 R16 403 B 1 HETATM 10 C C36 R16 . . . M 9 -2.046 -16.724 -49.52 1 152.05 ? C36 R16 403 B 1 HETATM 11 C C37 R16 . . . M 9 -0.862 -15.833 -49.96 1 147.1 ? C37 R16 403 B 1 HETATM 12 C C38 R16 . . . M 9 0.236 -15.88 -48.901 1 138.55 ? C38 R16 403 B 1 HETATM 13 C C39 R16 . . . M 9 1.483 -15.163 -49.415 1 140.27 ? C39 R16 403 B 1 HETATM 14 C C40 R16 . . . M 9 1.22 -13.705 -49.721 1 152.99 ? C40 R16 403 B 1 HETATM 15 C C41 R16 . . . M 9 0.915 -12.882 -48.452 1 149.53 ? C41 R16 403 B 1 HETATM 16 C C42 R16 . . . M 9 0.411 -11.491 -48.848 1 138.85 ? C42 R16 403 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #