data_6W8A # _model_server_result.job_id ZYpenbngWVrZaK4Ah_pfAA _model_server_result.datetime_utc '2024-11-04 22:38:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w8a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":406}' # _entry.id 6W8A # _exptl.entry_id 6W8A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W8A _cell.length_a 66.867 _cell.length_b 119.951 _cell.length_c 129.245 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W8A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 I N N ? 5 M N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 V N N ? 5 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 93 1_555 B SG CYS 74 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O THR 123 A THR 142 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc2 A O THR 123 A THR 142 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.079 ? metalc ? metalc3 A OG1 THR 123 A THR 142 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.361 ? metalc ? metalc4 A O ILE 124 A ILE 143 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? metalc ? metalc5 A O ILE 124 A ILE 143 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc6 A O GLY 125 A GLY 144 1_555 C K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? metalc ? metalc7 A O GLY 125 A GLY 144 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc8 A O PHE 126 A PHE 145 1_555 C K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc9 A O THR 232 A THR 251 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc10 A O THR 232 A THR 251 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc11 A OG1 THR 232 A THR 251 1_555 J K K . A K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.047 ? metalc ? metalc12 A O ILE 233 A ILE 252 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc13 A O ILE 233 A ILE 252 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc14 A O GLY 234 A GLY 253 1_555 C K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? metalc ? metalc15 A O GLY 234 A GLY 253 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc16 A O PHE 235 A PHE 254 1_555 C K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc17 A OE1 GLU 290 A GLU 309 1_555 P CD CD . B CD 404 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc18 C K K . A K 401 1_555 B O GLY 125 B GLY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? metalc ? metalc19 C K K . A K 401 1_555 B O PHE 126 B PHE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc20 C K K . A K 401 1_555 B O GLY 234 B GLY 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc21 C K K . A K 401 1_555 B O PHE 235 B PHE 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? metalc ? metalc22 D K K . A K 402 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc23 D K K . A K 402 1_555 B O ILE 124 B ILE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc24 D K K . A K 402 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc25 D K K . A K 402 1_555 B O ILE 233 B ILE 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc26 J K K . A K 408 1_555 B O THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc27 J K K . A K 408 1_555 B OG1 THR 123 B THR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.226 ? metalc ? metalc28 J K K . A K 408 1_555 B O THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc29 J K K . A K 408 1_555 B OG1 THR 232 B THR 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.128 ? metalc ? metalc30 B OD1 ASN 92 B ASN 111 1_555 Y K K . B K 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.299 ? metalc ? metalc31 B O ILE 124 B ILE 143 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? metalc ? metalc32 B O GLY 125 B GLY 144 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc33 B O ILE 233 B ILE 252 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc34 B O GLY 234 B GLY 253 1_555 N K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc35 B OE1 GLU 290 B GLU 309 1_555 P CD CD . B CD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 470 n n C27 H271 R16 sing 471 n n C27 H272 R16 sing 472 n n C27 H273 R16 sing 473 n n C28 C29 R16 sing 474 n n C28 H281 R16 sing 475 n n C28 H282 R16 sing 476 n n C29 C30 R16 sing 477 n n C29 H291 R16 sing 478 n n C29 H292 R16 sing 479 n n C30 C31 R16 sing 480 n n C30 H301 R16 sing 481 n n C30 H302 R16 sing 482 n n C31 C32 R16 sing 483 n n C31 H311 R16 sing 484 n n C31 H312 R16 sing 485 n n C32 C33 R16 sing 486 n n C32 H321 R16 sing 487 n n C32 H322 R16 sing 488 n n C33 C34 R16 sing 489 n n C33 H331 R16 sing 490 n n C33 H332 R16 sing 491 n n C34 C35 R16 sing 492 n n C34 H341 R16 sing 493 n n C34 H342 R16 sing 494 n n C35 C36 R16 sing 495 n n C35 H351 R16 sing 496 n n C35 H352 R16 sing 497 n n C36 C37 R16 sing 498 n n C36 H361 R16 sing 499 n n C36 H362 R16 sing 500 n n C37 C38 R16 sing 501 n n C37 H371 R16 sing 502 n n C37 H372 R16 sing 503 n n C38 C39 R16 sing 504 n n C38 H381 R16 sing 505 n n C38 H382 R16 sing 506 n n C39 C40 R16 sing 507 n n C39 H391 R16 sing 508 n n C39 H392 R16 sing 509 n n C40 C41 R16 sing 510 n n C40 H401 R16 sing 511 n n C40 H402 R16 sing 512 n n C41 C42 R16 sing 513 n n C41 H411 R16 sing 514 n n C41 H412 R16 sing 515 n n C42 H421 R16 sing 516 n n C42 H422 R16 sing 517 n n C42 H423 R16 sing 518 n n # _atom_sites.entry_id 6W8A _atom_sites.fract_transf_matrix[1][1] 0.014955 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007737 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K A 1 401 402 K K . D 2 K A 1 402 403 K K . E 3 Q6F A 1 403 406 Q6F Q6F . F 4 16C A 1 404 407 16C 16C . G 5 R16 A 1 405 408 R16 R16 . H 5 R16 A 1 406 409 R16 R16 . I 5 R16 A 1 407 410 R16 R16 . J 2 K A 1 408 402 K K . K 6 CD A 1 409 1 CD CD . L 7 LNK A 1 410 1 LNK LNK . M 5 R16 B 1 401 404 R16 R16 . N 2 K B 1 402 401 K K . O 6 CD B 1 403 404 CD CD . P 6 CD B 1 404 405 CD CD . Q 6 CD B 1 405 406 CD CD . R 5 R16 B 1 406 407 R16 R16 . S 5 R16 B 1 407 408 R16 R16 . T 5 R16 B 1 408 409 R16 R16 . U 3 Q6F B 1 409 410 Q6F Q6F . V 5 R16 B 1 410 411 R16 R16 . W 5 R16 B 1 411 412 R16 R16 . X 8 D12 B 1 412 1 D12 D12 . Y 2 K B 1 413 1 K K . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C31 R16 . . . H 5 -13.891 -9.083 -32.737 1 136.41 ? C31 R16 406 A 1 HETATM 2 C C32 R16 . . . H 5 -13.227 -10.056 -33.708 1 135.37 ? C32 R16 406 A 1 HETATM 3 C C33 R16 . . . H 5 -14.277 -10.624 -34.659 1 134.39 ? C33 R16 406 A 1 HETATM 4 C C34 R16 . . . H 5 -13.797 -11.966 -35.207 1 133.42 ? C34 R16 406 A 1 HETATM 5 C C35 R16 . . . H 5 -14.794 -12.479 -36.244 1 132.45 ? C35 R16 406 A 1 HETATM 6 C C36 R16 . . . H 5 -14.853 -14.004 -36.191 1 131.25 ? C36 R16 406 A 1 HETATM 7 C C37 R16 . . . H 5 -16.037 -14.436 -35.327 1 128.49 ? C37 R16 406 A 1 HETATM 8 C C38 R16 . . . H 5 -16.091 -15.961 -35.258 1 125.61 ? C38 R16 406 A 1 HETATM 9 C C39 R16 . . . H 5 -17.249 -16.383 -34.358 1 123.53 ? C39 R16 406 A 1 HETATM 10 C C40 R16 . . . H 5 -17.795 -17.731 -34.824 1 121.46 ? C40 R16 406 A 1 HETATM 11 C C41 R16 . . . H 5 -19.275 -17.837 -34.457 1 120.44 ? C41 R16 406 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #