data_6W8H # _model_server_result.job_id PZB_Nfc3iIJPf4qU6Hwhhg _model_server_result.datetime_utc '2025-02-28 03:50:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 6W8H # _exptl.entry_id 6W8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 353.458 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-cyclopropyl-N-[trans-4-(2-hydroxypropan-2-yl)cyclohexyl]-1,8-naphthyridine-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.88 _cell.angle_gamma 90 _cell.entry_id 6W8H _cell.length_a 48.331 _cell.length_b 67.197 _cell.length_c 69.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 G N N # _chem_comp.formula 'C21 H27 N3 O2' _chem_comp.formula_weight 353.458 _chem_comp.id TJG _chem_comp.mon_nstd_flag . _chem_comp.name 7-cyclopropyl-N-[trans-4-(2-hydroxypropan-2-yl)cyclohexyl]-1,8-naphthyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C03 C02 TJG sing 351 n n C02 C01 TJG sing 352 n n C02 O04 TJG sing 353 n n C02 C05 TJG sing 354 n n C07 C05 TJG sing 355 n n C07 C08 TJG sing 356 n n C12 C05 TJG sing 357 n n C12 C11 TJG sing 358 n n O15 C14 TJG doub 359 n n C08 C09 TJG sing 360 n n C09 C11 TJG sing 361 n n C09 N13 TJG sing 362 n n C14 N13 TJG sing 363 n n C14 C16 TJG sing 364 n n C17 C16 TJG doub 365 n y C17 N18 TJG sing 366 n y C16 C25 TJG sing 367 n y N18 C19 TJG doub 368 n y C25 C24 TJG doub 369 n y C19 C24 TJG sing 370 n y C19 N20 TJG sing 371 n y C24 C23 TJG sing 372 n y N20 C21 TJG doub 373 n y C23 C22 TJG doub 374 n y C21 C22 TJG sing 375 n y C21 C26 TJG sing 376 n n C28 C26 TJG sing 377 n n C28 C27 TJG sing 378 n n C26 C27 TJG sing 379 n n C17 H1 TJG sing 380 n n C22 H2 TJG sing 381 n n C26 H3 TJG sing 382 n n C28 H4 TJG sing 383 n n C28 H5 TJG sing 384 n n C01 H6 TJG sing 385 n n C01 H7 TJG sing 386 n n C01 H8 TJG sing 387 n n C03 H9 TJG sing 388 n n C03 H10 TJG sing 389 n n C03 H11 TJG sing 390 n n O04 H12 TJG sing 391 n n C05 H13 TJG sing 392 n n C07 H14 TJG sing 393 n n C07 H15 TJG sing 394 n n C08 H16 TJG sing 395 n n C08 H17 TJG sing 396 n n C09 H18 TJG sing 397 n n C11 H19 TJG sing 398 n n C11 H20 TJG sing 399 n n C12 H21 TJG sing 400 n n C12 H22 TJG sing 401 n n N13 H23 TJG sing 402 n n C23 H24 TJG sing 403 n n C25 H25 TJG sing 404 n n C27 H26 TJG sing 405 n n C27 H27 TJG sing 406 n n # _atom_sites.entry_id 6W8H _atom_sites.fract_transf_matrix[1][1] 0.020691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002498 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 201 1200 GSH GSH . D 3 EDO A 1 202 1 EDO EDO . E 4 TJG A 1 203 2 TJG LIG . F 2 GSH C 1 201 1200 GSH GSH . G 4 TJG C 1 202 1 TJG LIG . H 5 HOH A 1 301 40 HOH HOH . H 5 HOH A 2 302 65 HOH HOH . H 5 HOH A 3 303 86 HOH HOH . H 5 HOH A 4 304 13 HOH HOH . H 5 HOH A 5 305 50 HOH HOH . H 5 HOH A 6 306 17 HOH HOH . H 5 HOH A 7 307 23 HOH HOH . H 5 HOH A 8 308 70 HOH HOH . H 5 HOH A 9 309 20 HOH HOH . H 5 HOH A 10 310 6 HOH HOH . H 5 HOH A 11 311 43 HOH HOH . H 5 HOH A 12 312 21 HOH HOH . H 5 HOH A 13 313 42 HOH HOH . H 5 HOH A 14 314 24 HOH HOH . H 5 HOH A 15 315 27 HOH HOH . H 5 HOH A 16 316 22 HOH HOH . H 5 HOH A 17 317 16 HOH HOH . H 5 HOH A 18 318 76 HOH HOH . H 5 HOH A 19 319 36 HOH HOH . H 5 HOH A 20 320 10 HOH HOH . H 5 HOH A 21 321 44 HOH HOH . H 5 HOH A 22 322 83 HOH HOH . H 5 HOH A 23 323 96 HOH HOH . H 5 HOH A 24 324 35 HOH HOH . H 5 HOH A 25 325 80 HOH HOH . H 5 HOH A 26 326 15 HOH HOH . H 5 HOH A 27 327 84 HOH HOH . H 5 HOH A 28 328 12 HOH HOH . H 5 HOH A 29 329 106 HOH HOH . H 5 HOH A 30 330 2 HOH HOH . H 5 HOH A 31 331 98 HOH HOH . H 5 HOH A 32 332 81 HOH HOH . H 5 HOH A 33 333 28 HOH HOH . H 5 HOH A 34 334 1 HOH HOH . H 5 HOH A 35 335 69 HOH HOH . H 5 HOH A 36 336 87 HOH HOH . H 5 HOH A 37 337 5 HOH HOH . H 5 HOH A 38 338 26 HOH HOH . H 5 HOH A 39 339 31 HOH HOH . H 5 HOH A 40 340 95 HOH HOH . H 5 HOH A 41 341 11 HOH HOH . H 5 HOH A 42 342 25 HOH HOH . H 5 HOH A 43 343 3 HOH HOH . H 5 HOH A 44 344 103 HOH HOH . H 5 HOH A 45 345 51 HOH HOH . H 5 HOH A 46 346 104 HOH HOH . H 5 HOH A 47 347 85 HOH HOH . H 5 HOH A 48 348 78 HOH HOH . H 5 HOH A 49 349 75 HOH HOH . H 5 HOH A 50 350 77 HOH HOH . H 5 HOH A 51 351 47 HOH HOH . I 5 HOH C 1 301 100 HOH HOH . I 5 HOH C 2 302 67 HOH HOH . I 5 HOH C 3 303 58 HOH HOH . I 5 HOH C 4 304 64 HOH HOH . I 5 HOH C 5 305 107 HOH HOH . I 5 HOH C 6 306 66 HOH HOH . I 5 HOH C 7 307 105 HOH HOH . I 5 HOH C 8 308 79 HOH HOH . I 5 HOH C 9 309 38 HOH HOH . I 5 HOH C 10 310 101 HOH HOH . I 5 HOH C 11 311 99 HOH HOH . I 5 HOH C 12 312 54 HOH HOH . I 5 HOH C 13 313 7 HOH HOH . I 5 HOH C 14 314 61 HOH HOH . I 5 HOH C 15 315 4 HOH HOH . I 5 HOH C 16 316 90 HOH HOH . I 5 HOH C 17 317 62 HOH HOH . I 5 HOH C 18 318 74 HOH HOH . I 5 HOH C 19 319 73 HOH HOH . I 5 HOH C 20 320 88 HOH HOH . I 5 HOH C 21 321 30 HOH HOH . I 5 HOH C 22 322 72 HOH HOH . I 5 HOH C 23 323 97 HOH HOH . I 5 HOH C 24 324 91 HOH HOH . I 5 HOH C 25 325 41 HOH HOH . I 5 HOH C 26 326 102 HOH HOH . I 5 HOH C 27 327 59 HOH HOH . I 5 HOH C 28 328 34 HOH HOH . I 5 HOH C 29 329 18 HOH HOH . I 5 HOH C 30 330 71 HOH HOH . I 5 HOH C 31 331 57 HOH HOH . I 5 HOH C 32 332 93 HOH HOH . I 5 HOH C 33 333 19 HOH HOH . I 5 HOH C 34 334 37 HOH HOH . I 5 HOH C 35 335 82 HOH HOH . I 5 HOH C 36 336 32 HOH HOH . I 5 HOH C 37 337 94 HOH HOH . I 5 HOH C 38 338 39 HOH HOH . I 5 HOH C 39 339 29 HOH HOH . I 5 HOH C 40 340 33 HOH HOH . I 5 HOH C 41 341 9 HOH HOH . I 5 HOH C 42 342 55 HOH HOH . I 5 HOH C 43 343 92 HOH HOH . I 5 HOH C 44 344 14 HOH HOH . I 5 HOH C 45 345 53 HOH HOH . I 5 HOH C 46 346 56 HOH HOH . I 5 HOH C 47 347 68 HOH HOH . I 5 HOH C 48 348 49 HOH HOH . I 5 HOH C 49 349 89 HOH HOH . I 5 HOH C 50 350 52 HOH HOH . I 5 HOH C 51 351 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C17 TJG . . . G 4 11.122 8.963 5.177 1 48.9 ? C17 TJG 202 C 1 HETATM 2 C C21 TJG . . . G 4 9.958 10.619 9.304 1 44.87 ? C21 TJG 202 C 1 HETATM 3 C C22 TJG . . . G 4 9.74 9.354 9.839 1 44.74 ? C22 TJG 202 C 1 HETATM 4 C C24 TJG . . . G 4 10.337 8.42 7.714 1 46.79 ? C24 TJG 202 C 1 HETATM 5 C C26 TJG . . . G 4 9.763 11.851 10.161 1 44.13 ? C26 TJG 202 C 1 HETATM 6 C C28 TJG . . . G 4 9.94 13.23 9.587 1 44.11 ? C28 TJG 202 C 1 HETATM 7 C C01 TJG . . . G 4 15.201 0.129 2.59 1 60.3 ? C01 TJG 202 C 1 HETATM 8 C C02 TJG . . . G 4 13.721 0.466 2.487 1 60.37 ? C02 TJG 202 C 1 HETATM 9 C C03 TJG . . . G 4 13.294 0.554 1.03 1 60.51 ? C03 TJG 202 C 1 HETATM 10 O O04 TJG . . . G 4 13.012 -0.638 3.078 1 61.29 ? O04 TJG 202 C 1 HETATM 11 C C05 TJG . . . G 4 13.342 1.734 3.295 1 60.39 ? C05 TJG 202 C 1 HETATM 12 C C07 TJG . . . G 4 14.114 2.997 2.887 1 60.53 ? C07 TJG 202 C 1 HETATM 13 C C08 TJG . . . G 4 13.78 4.186 3.793 1 59.64 ? C08 TJG 202 C 1 HETATM 14 C C09 TJG . . . G 4 12.283 4.462 3.842 1 58.04 ? C09 TJG 202 C 1 HETATM 15 C C11 TJG . . . G 4 11.512 3.207 4.208 1 59.15 ? C11 TJG 202 C 1 HETATM 16 C C12 TJG . . . G 4 11.847 2.053 3.27 1 59.74 ? C12 TJG 202 C 1 HETATM 17 N N13 TJG . . . G 4 11.977 5.537 4.793 1 55.54 ? N13 TJG 202 C 1 HETATM 18 C C14 TJG . . . G 4 11.214 6.59 4.471 1 51.64 ? C14 TJG 202 C 1 HETATM 19 O O15 TJG . . . G 4 10.741 6.728 3.347 1 51.27 ? O15 TJG 202 C 1 HETATM 20 C C16 TJG . . . G 4 10.968 7.624 5.526 1 50.23 ? C16 TJG 202 C 1 HETATM 21 N N18 TJG . . . G 4 10.933 9.997 5.968 1 47.64 ? N18 TJG 202 C 1 HETATM 22 C C19 TJG . . . G 4 10.537 9.735 7.248 1 45.7 ? C19 TJG 202 C 1 HETATM 23 N N20 TJG . . . G 4 10.349 10.825 8.047 1 44.83 ? N20 TJG 202 C 1 HETATM 24 C C23 TJG . . . G 4 9.929 8.258 9.056 1 45.47 ? C23 TJG 202 C 1 HETATM 25 C C25 TJG . . . G 4 10.562 7.357 6.812 1 48.16 ? C25 TJG 202 C 1 HETATM 26 C C27 TJG . . . G 4 10.938 12.702 10.552 1 43.76 ? C27 TJG 202 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #