data_6W9H # _model_server_result.job_id Y6x1O5le-VFobuM_AwGAPw _model_server_result.datetime_utc '2024-10-10 16:32:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w9h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":4000}' # _entry.id 6W9H # _exptl.entry_id 6W9H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 571.68 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 4-{(3R)-3-[4-(benzyloxy)phenyl]-3-[(4-fluorophenyl)sulfonyl]pyrrolidine-1-carbonyl}-1lambda~6~-thiane-1,1-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W9H _cell.length_a 61.729 _cell.length_b 61.729 _cell.length_c 155.778 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H30 F N O6 S2' _chem_comp.formula_weight 571.68 _chem_comp.id TKJ _chem_comp.mon_nstd_flag . _chem_comp.name 4-{(3R)-3-[4-(benzyloxy)phenyl]-3-[(4-fluorophenyl)sulfonyl]pyrrolidine-1-carbonyl}-1lambda~6~-thiane-1,1-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O32 S16 TKJ doub 306 n n O33 S16 TKJ doub 307 n n S16 C14 TKJ sing 308 n n S16 C17 TKJ sing 309 n n C37 C36 TKJ sing 310 n n C37 C17 TKJ sing 311 n n C5 C6 TKJ sing 312 n n C5 S4 TKJ sing 313 n n C30 C29 TKJ doub 314 n y C30 C31 TKJ sing 315 n y O38 S4 TKJ doub 316 n n C36 N35 TKJ sing 317 n n C29 C28 TKJ sing 318 n y C6 C1 TKJ sing 319 n n C14 C9 TKJ doub 320 n y C14 C13 TKJ sing 321 n y C17 C18 TKJ sing 322 n n C17 C34 TKJ sing 323 n n C31 C26 TKJ doub 324 n y C9 C10 TKJ sing 325 n y C23 C22 TKJ doub 326 n y C23 C18 TKJ sing 327 n y C1 C7 TKJ sing 328 n n C1 C2 TKJ sing 329 n n S4 C3 TKJ sing 330 n n S4 O39 TKJ doub 331 n n N35 C7 TKJ sing 332 n n N35 C34 TKJ sing 333 n n C13 C12 TKJ doub 334 n y C7 O8 TKJ doub 335 n n C22 C21 TKJ sing 336 n y C18 C19 TKJ doub 337 n y C3 C2 TKJ sing 338 n n C28 C27 TKJ doub 339 n y C10 C11 TKJ doub 340 n y C26 C27 TKJ sing 341 n y C26 C25 TKJ sing 342 n n C12 C11 TKJ sing 343 n y C11 F15 TKJ sing 344 n n C21 C20 TKJ doub 345 n y C21 O24 TKJ sing 346 n n C19 C20 TKJ sing 347 n y C25 O24 TKJ sing 348 n n C1 H1 TKJ sing 349 n n C2 H2 TKJ sing 350 n n C2 H3 TKJ sing 351 n n C3 H4 TKJ sing 352 n n C3 H5 TKJ sing 353 n n C5 H6 TKJ sing 354 n n C5 H7 TKJ sing 355 n n C6 H8 TKJ sing 356 n n C6 H9 TKJ sing 357 n n C9 H10 TKJ sing 358 n n C10 H11 TKJ sing 359 n n C12 H12 TKJ sing 360 n n C13 H13 TKJ sing 361 n n C19 H14 TKJ sing 362 n n C20 H15 TKJ sing 363 n n C22 H16 TKJ sing 364 n n C23 H17 TKJ sing 365 n n C25 H18 TKJ sing 366 n n C25 H19 TKJ sing 367 n n C27 H20 TKJ sing 368 n n C28 H21 TKJ sing 369 n n C29 H22 TKJ sing 370 n n C30 H23 TKJ sing 371 n n C31 H24 TKJ sing 372 n n C34 H25 TKJ sing 373 n n C34 H26 TKJ sing 374 n n C36 H27 TKJ sing 375 n n C36 H28 TKJ sing 376 n n C37 H29 TKJ sing 377 n n C37 H30 TKJ sing 378 n n # _atom_sites.entry_id 6W9H _atom_sites.fract_transf_matrix[1][1] 0.0162 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006419 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TKJ A 1 4000 4000 TKJ Z7E . C 3 HOH A 1 4101 130 HOH HOH . C 3 HOH A 2 4102 14 HOH HOH . C 3 HOH A 3 4103 18 HOH HOH . C 3 HOH A 4 4104 126 HOH HOH . C 3 HOH A 5 4105 38 HOH HOH . C 3 HOH A 6 4106 59 HOH HOH . C 3 HOH A 7 4107 8 HOH HOH . C 3 HOH A 8 4108 127 HOH HOH . C 3 HOH A 9 4109 131 HOH HOH . C 3 HOH A 10 4110 57 HOH HOH . C 3 HOH A 11 4111 36 HOH HOH . C 3 HOH A 12 4112 42 HOH HOH . C 3 HOH A 13 4113 28 HOH HOH . C 3 HOH A 14 4114 93 HOH HOH . C 3 HOH A 15 4115 35 HOH HOH . C 3 HOH A 16 4116 22 HOH HOH . C 3 HOH A 17 4117 82 HOH HOH . C 3 HOH A 18 4118 43 HOH HOH . C 3 HOH A 19 4119 16 HOH HOH . C 3 HOH A 20 4120 3 HOH HOH . C 3 HOH A 21 4121 86 HOH HOH . C 3 HOH A 22 4122 79 HOH HOH . C 3 HOH A 23 4123 11 HOH HOH . C 3 HOH A 24 4124 15 HOH HOH . C 3 HOH A 25 4125 52 HOH HOH . C 3 HOH A 26 4126 124 HOH HOH . C 3 HOH A 27 4127 24 HOH HOH . C 3 HOH A 28 4128 17 HOH HOH . C 3 HOH A 29 4129 115 HOH HOH . C 3 HOH A 30 4130 45 HOH HOH . C 3 HOH A 31 4131 98 HOH HOH . C 3 HOH A 32 4132 69 HOH HOH . C 3 HOH A 33 4133 103 HOH HOH . C 3 HOH A 34 4134 48 HOH HOH . C 3 HOH A 35 4135 29 HOH HOH . C 3 HOH A 36 4136 77 HOH HOH . C 3 HOH A 37 4137 105 HOH HOH . C 3 HOH A 38 4138 40 HOH HOH . C 3 HOH A 39 4139 4 HOH HOH . C 3 HOH A 40 4140 92 HOH HOH . C 3 HOH A 41 4141 10 HOH HOH . C 3 HOH A 42 4142 26 HOH HOH . C 3 HOH A 43 4143 129 HOH HOH . C 3 HOH A 44 4144 23 HOH HOH . C 3 HOH A 45 4145 62 HOH HOH . C 3 HOH A 46 4146 67 HOH HOH . C 3 HOH A 47 4147 68 HOH HOH . C 3 HOH A 48 4148 94 HOH HOH . C 3 HOH A 49 4149 53 HOH HOH . C 3 HOH A 50 4150 65 HOH HOH . C 3 HOH A 51 4151 84 HOH HOH . C 3 HOH A 52 4152 120 HOH HOH . C 3 HOH A 53 4153 39 HOH HOH . C 3 HOH A 54 4154 27 HOH HOH . C 3 HOH A 55 4155 95 HOH HOH . C 3 HOH A 56 4156 5 HOH HOH . C 3 HOH A 57 4157 37 HOH HOH . C 3 HOH A 58 4158 80 HOH HOH . C 3 HOH A 59 4159 96 HOH HOH . C 3 HOH A 60 4160 13 HOH HOH . C 3 HOH A 61 4161 56 HOH HOH . C 3 HOH A 62 4162 2 HOH HOH . C 3 HOH A 63 4163 41 HOH HOH . C 3 HOH A 64 4164 25 HOH HOH . C 3 HOH A 65 4165 108 HOH HOH . C 3 HOH A 66 4166 33 HOH HOH . C 3 HOH A 67 4167 30 HOH HOH . C 3 HOH A 68 4168 87 HOH HOH . C 3 HOH A 69 4169 76 HOH HOH . C 3 HOH A 70 4170 31 HOH HOH . C 3 HOH A 71 4171 66 HOH HOH . C 3 HOH A 72 4172 9 HOH HOH . C 3 HOH A 73 4173 63 HOH HOH . C 3 HOH A 74 4174 44 HOH HOH . C 3 HOH A 75 4175 6 HOH HOH . C 3 HOH A 76 4176 55 HOH HOH . C 3 HOH A 77 4177 32 HOH HOH . C 3 HOH A 78 4178 100 HOH HOH . C 3 HOH A 79 4179 123 HOH HOH . C 3 HOH A 80 4180 73 HOH HOH . C 3 HOH A 81 4181 49 HOH HOH . C 3 HOH A 82 4182 54 HOH HOH . C 3 HOH A 83 4183 85 HOH HOH . C 3 HOH A 84 4184 51 HOH HOH . C 3 HOH A 85 4185 64 HOH HOH . C 3 HOH A 86 4186 83 HOH HOH . C 3 HOH A 87 4187 12 HOH HOH . C 3 HOH A 88 4188 109 HOH HOH . C 3 HOH A 89 4189 74 HOH HOH . C 3 HOH A 90 4190 71 HOH HOH . C 3 HOH A 91 4191 101 HOH HOH . C 3 HOH A 92 4192 58 HOH HOH . C 3 HOH A 93 4193 46 HOH HOH . C 3 HOH A 94 4194 91 HOH HOH . C 3 HOH A 95 4195 34 HOH HOH . C 3 HOH A 96 4196 1 HOH HOH . C 3 HOH A 97 4197 122 HOH HOH . C 3 HOH A 98 4198 88 HOH HOH . C 3 HOH A 99 4199 72 HOH HOH . C 3 HOH A 100 4200 89 HOH HOH . C 3 HOH A 101 4201 20 HOH HOH . C 3 HOH A 102 4202 114 HOH HOH . C 3 HOH A 103 4203 107 HOH HOH . C 3 HOH A 104 4204 7 HOH HOH . C 3 HOH A 105 4205 75 HOH HOH . C 3 HOH A 106 4206 119 HOH HOH . C 3 HOH A 107 4207 104 HOH HOH . C 3 HOH A 108 4208 128 HOH HOH . C 3 HOH A 109 4209 111 HOH HOH . C 3 HOH A 110 4210 50 HOH HOH . C 3 HOH A 111 4211 116 HOH HOH . C 3 HOH A 112 4212 21 HOH HOH . C 3 HOH A 113 4213 90 HOH HOH . C 3 HOH A 114 4214 134 HOH HOH . C 3 HOH A 115 4215 113 HOH HOH . C 3 HOH A 116 4216 112 HOH HOH . C 3 HOH A 117 4217 70 HOH HOH . C 3 HOH A 118 4218 106 HOH HOH . C 3 HOH A 119 4219 47 HOH HOH . C 3 HOH A 120 4220 97 HOH HOH . C 3 HOH A 121 4221 19 HOH HOH . C 3 HOH A 122 4222 132 HOH HOH . C 3 HOH A 123 4223 61 HOH HOH . C 3 HOH A 124 4224 118 HOH HOH . C 3 HOH A 125 4225 125 HOH HOH . C 3 HOH A 126 4226 78 HOH HOH . C 3 HOH A 127 4227 81 HOH HOH . C 3 HOH A 128 4228 117 HOH HOH . C 3 HOH A 129 4229 133 HOH HOH . C 3 HOH A 130 4230 121 HOH HOH . C 3 HOH A 131 4231 110 HOH HOH . C 3 HOH A 132 4232 60 HOH HOH . C 3 HOH A 133 4233 102 HOH HOH . C 3 HOH A 134 4234 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TKJ . . . B 2 -0.537 24.708 14.312 1 52.19 ? C1 TKJ 4000 A 1 HETATM 2 C C2 TKJ . . . B 2 0.205 23.917 15.402 1 52.1 ? C2 TKJ 4000 A 1 HETATM 3 C C3 TKJ . . . B 2 1.55 23.36 14.926 1 52.5 ? C3 TKJ 4000 A 1 HETATM 4 C C5 TKJ . . . B 2 1.66 25.523 13.284 1 52.71 ? C5 TKJ 4000 A 1 HETATM 5 C C6 TKJ . . . B 2 0.306 25.916 13.87 1 52.37 ? C6 TKJ 4000 A 1 HETATM 6 S S4 TKJ . . . B 2 2.663 24.629 14.421 1 52.81 ? S4 TKJ 4000 A 1 HETATM 7 C C7 TKJ . . . B 2 -1.847 25.205 14.856 1 51.56 ? C7 TKJ 4000 A 1 HETATM 8 O O8 TKJ . . . B 2 -1.888 26.244 15.489 1 51.58 ? O8 TKJ 4000 A 1 HETATM 9 C C9 TKJ . . . B 2 -8.298 26.547 14.175 1 53.15 ? C9 TKJ 4000 A 1 HETATM 10 C C10 TKJ . . . B 2 -9.057 27.177 15.143 1 52.7 ? C10 TKJ 4000 A 1 HETATM 11 C C11 TKJ . . . B 2 -8.446 28.1 15.951 1 52.63 ? C11 TKJ 4000 A 1 HETATM 12 C C12 TKJ . . . B 2 -7.135 28.463 15.814 1 52.83 ? C12 TKJ 4000 A 1 HETATM 13 C C13 TKJ . . . B 2 -6.371 27.827 14.854 1 53.07 ? C13 TKJ 4000 A 1 HETATM 14 C C14 TKJ . . . B 2 -6.947 26.844 14.067 1 53.65 ? C14 TKJ 4000 A 1 HETATM 15 F F15 TKJ . . . B 2 -9.158 28.643 16.97 1 52.46 ? F15 TKJ 4000 A 1 HETATM 16 S S16 TKJ . . . B 2 -5.913 25.835 13.049 1 54.56 ? S16 TKJ 4000 A 1 HETATM 17 C C17 TKJ . . . B 2 -5.316 24.439 14.133 1 51.7 ? C17 TKJ 4000 A 1 HETATM 18 C C18 TKJ . . . B 2 -6.494 23.837 14.892 1 49.49 ? C18 TKJ 4000 A 1 HETATM 19 C C19 TKJ . . . B 2 -6.703 24.111 16.239 1 48.46 ? C19 TKJ 4000 A 1 HETATM 20 C C20 TKJ . . . B 2 -7.821 23.647 16.903 1 47.45 ? C20 TKJ 4000 A 1 HETATM 21 C C21 TKJ . . . B 2 -8.756 22.896 16.222 1 46.99 ? C21 TKJ 4000 A 1 HETATM 22 C C22 TKJ . . . B 2 -8.551 22.578 14.889 1 47.73 ? C22 TKJ 4000 A 1 HETATM 23 C C23 TKJ . . . B 2 -7.426 23.045 14.239 1 48.63 ? C23 TKJ 4000 A 1 HETATM 24 O O24 TKJ . . . B 2 -9.87 22.529 16.936 1 45.96 ? O24 TKJ 4000 A 1 HETATM 25 C C25 TKJ . . . B 2 -10.866 21.745 16.265 1 45.38 ? C25 TKJ 4000 A 1 HETATM 26 C C26 TKJ . . . B 2 -11.727 22.608 15.384 1 44.54 ? C26 TKJ 4000 A 1 HETATM 27 C C27 TKJ . . . B 2 -12.161 23.851 15.814 1 44.45 ? C27 TKJ 4000 A 1 HETATM 28 C C28 TKJ . . . B 2 -13.052 24.588 15.055 1 44.54 ? C28 TKJ 4000 A 1 HETATM 29 C C29 TKJ . . . B 2 -13.506 24.099 13.85 1 44.38 ? C29 TKJ 4000 A 1 HETATM 30 C C30 TKJ . . . B 2 -13.066 22.876 13.402 1 44.04 ? C30 TKJ 4000 A 1 HETATM 31 C C31 TKJ . . . B 2 -12.178 22.136 14.162 1 44.11 ? C31 TKJ 4000 A 1 HETATM 32 O O32 TKJ . . . B 2 -6.735 25.268 12.015 1 54.47 ? O32 TKJ 4000 A 1 HETATM 33 O O33 TKJ . . . B 2 -4.764 26.614 12.666 1 55.56 ? O33 TKJ 4000 A 1 HETATM 34 C C34 TKJ . . . B 2 -4.242 24.873 15.169 1 51.4 ? C34 TKJ 4000 A 1 HETATM 35 N N35 TKJ . . . B 2 -2.954 24.48 14.619 1 51.2 ? N35 TKJ 4000 A 1 HETATM 36 C C36 TKJ . . . B 2 -3.114 23.311 13.765 1 50.97 ? C36 TKJ 4000 A 1 HETATM 37 C C37 TKJ . . . B 2 -4.546 23.424 13.25 1 51.09 ? C37 TKJ 4000 A 1 HETATM 38 O O38 TKJ . . . B 2 3.76 24.036 13.703 1 53.05 ? O38 TKJ 4000 A 1 HETATM 39 O O39 TKJ . . . B 2 2.969 25.464 15.551 1 52.8 ? O39 TKJ 4000 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 39 #