data_6W9S # _model_server_result.job_id HwlP8od-GjSu9voTKm113g _model_server_result.datetime_utc '2024-12-21 14:04:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6w9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6W9S # _exptl.entry_id 6W9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6W9S _cell.length_a 67.336 _cell.length_b 67.336 _cell.length_c 144.427 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 102 A CYS 285 1_555 B CB NEH 78 B NEH 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.671 ? covale ? covale2 B C GLY 77 B GLY 75 1_555 B N NEH 78 B NEH 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 6W9S _atom_sites.fract_transf_matrix[1][1] 0.014851 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014851 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006924 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FMT A 1 501 501 FMT FMT . D 3 FMT A 1 502 201 FMT FMT . E 3 FMT B 1 101 101 FMT FMT . F 4 HOH A 1 601 70 HOH HOH . F 4 HOH A 2 602 101 HOH HOH . F 4 HOH A 3 603 95 HOH HOH . F 4 HOH A 4 604 99 HOH HOH . F 4 HOH A 5 605 103 HOH HOH . F 4 HOH A 6 606 15 HOH HOH . F 4 HOH A 7 607 104 HOH HOH . F 4 HOH A 8 608 82 HOH HOH . F 4 HOH A 9 609 72 HOH HOH . F 4 HOH A 10 610 59 HOH HOH . F 4 HOH A 11 611 22 HOH HOH . F 4 HOH A 12 612 35 HOH HOH . F 4 HOH A 13 613 56 HOH HOH . F 4 HOH A 14 614 66 HOH HOH . F 4 HOH A 15 615 3 HOH HOH . F 4 HOH A 16 616 38 HOH HOH . F 4 HOH A 17 617 1 HOH HOH . F 4 HOH A 18 618 55 HOH HOH . F 4 HOH A 19 619 37 HOH HOH . F 4 HOH A 20 620 32 HOH HOH . F 4 HOH A 21 621 102 HOH HOH . F 4 HOH A 22 622 53 HOH HOH . F 4 HOH A 23 623 42 HOH HOH . F 4 HOH A 24 624 43 HOH HOH . F 4 HOH A 25 625 28 HOH HOH . F 4 HOH A 26 626 71 HOH HOH . F 4 HOH A 27 627 96 HOH HOH . F 4 HOH A 28 628 14 HOH HOH . F 4 HOH A 29 629 98 HOH HOH . F 4 HOH A 30 630 94 HOH HOH . F 4 HOH A 31 631 29 HOH HOH . F 4 HOH A 32 632 65 HOH HOH . F 4 HOH A 33 633 106 HOH HOH . F 4 HOH A 34 634 13 HOH HOH . F 4 HOH A 35 635 41 HOH HOH . F 4 HOH A 36 636 100 HOH HOH . F 4 HOH A 37 637 51 HOH HOH . F 4 HOH A 38 638 93 HOH HOH . F 4 HOH A 39 639 16 HOH HOH . F 4 HOH A 40 640 61 HOH HOH . F 4 HOH A 41 641 17 HOH HOH . F 4 HOH A 42 642 23 HOH HOH . F 4 HOH A 43 643 75 HOH HOH . F 4 HOH A 44 644 73 HOH HOH . F 4 HOH A 45 645 60 HOH HOH . F 4 HOH A 46 646 84 HOH HOH . F 4 HOH A 47 647 44 HOH HOH . G 4 HOH B 1 201 21 HOH HOH . G 4 HOH B 2 202 11 HOH HOH . G 4 HOH B 3 203 107 HOH HOH . G 4 HOH B 4 204 48 HOH HOH . G 4 HOH B 5 205 49 HOH HOH . G 4 HOH B 6 206 10 HOH HOH . G 4 HOH B 7 207 30 HOH HOH . G 4 HOH B 8 208 5 HOH HOH . G 4 HOH B 9 209 105 HOH HOH . G 4 HOH B 10 210 25 HOH HOH . G 4 HOH B 11 211 108 HOH HOH . G 4 HOH B 12 212 36 HOH HOH . G 4 HOH B 13 213 46 HOH HOH . G 4 HOH B 14 214 34 HOH HOH . G 4 HOH B 15 215 33 HOH HOH . G 4 HOH B 16 216 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 3 -18.599 6.473 -29.851 1 82.69 ? C FMT 502 A 1 HETATM 2 O O1 FMT . . . D 3 -17.597 5.854 -30.201 1 82.55 ? O1 FMT 502 A 1 HETATM 3 O O2 FMT . . . D 3 -19.546 5.931 -29.286 1 82.55 ? O2 FMT 502 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #