data_6WBH # _model_server_result.job_id jetXs2ks1suxizwf-ZQFeA _model_server_result.datetime_utc '2024-11-22 14:21:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wbh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 6WBH # _exptl.entry_id 6WBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WBH _cell.length_a 80.222 _cell.length_b 110.599 _cell.length_c 57.791 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC A 501 MAL 2 n B GLC 2 B 2 GLC A 501 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 383 A CYS 383 1_555 A SG CYS 430 A CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 384 A CYS 384 1_555 A SG CYS 396 A CYS 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? disulf ? disulf3 A SG CYS 392 A CYS 392 1_555 A SG CYS 417 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 B O4 GLC . B GLC 1 1_555 B C1 GLC . B GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.395 sing metalc ? metalc1 A NE2 HIS 217 A HIS 217 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc2 A OE2 GLU 223 A GLU 223 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc3 A OE1 GLU 311 A GLU 311 1_555 D ZN ZN . A ZN 503 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc4 A OE2 GLU 311 A GLU 311 1_555 D ZN ZN . A ZN 503 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? metalc ? metalc5 D ZN ZN . A ZN 503 1_555 F O HOH . A HOH 744 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6WBH _atom_sites.fract_transf_matrix[1][1] 0.012465 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL A 1 502 601 CL CL . D 4 ZN A 1 503 801 ZN ZN . E 4 ZN A 1 504 901 ZN ZN . F 5 HOH A 1 601 36 HOH HOH . F 5 HOH A 2 602 107 HOH HOH . F 5 HOH A 3 603 114 HOH HOH . F 5 HOH A 4 604 88 HOH HOH . F 5 HOH A 5 605 21 HOH HOH . F 5 HOH A 6 606 132 HOH HOH . F 5 HOH A 7 607 51 HOH HOH . F 5 HOH A 8 608 53 HOH HOH . F 5 HOH A 9 609 13 HOH HOH . F 5 HOH A 10 610 67 HOH HOH . F 5 HOH A 11 611 130 HOH HOH . F 5 HOH A 12 612 39 HOH HOH . F 5 HOH A 13 613 38 HOH HOH . F 5 HOH A 14 614 62 HOH HOH . F 5 HOH A 15 615 140 HOH HOH . F 5 HOH A 16 616 46 HOH HOH . F 5 HOH A 17 617 54 HOH HOH . F 5 HOH A 18 618 5 HOH HOH . F 5 HOH A 19 619 90 HOH HOH . F 5 HOH A 20 620 112 HOH HOH . F 5 HOH A 21 621 99 HOH HOH . F 5 HOH A 22 622 12 HOH HOH . F 5 HOH A 23 623 149 HOH HOH . F 5 HOH A 24 624 60 HOH HOH . F 5 HOH A 25 625 29 HOH HOH . F 5 HOH A 26 626 3 HOH HOH . F 5 HOH A 27 627 19 HOH HOH . F 5 HOH A 28 628 16 HOH HOH . F 5 HOH A 29 629 73 HOH HOH . F 5 HOH A 30 630 26 HOH HOH . F 5 HOH A 31 631 40 HOH HOH . F 5 HOH A 32 632 95 HOH HOH . F 5 HOH A 33 633 7 HOH HOH . F 5 HOH A 34 634 6 HOH HOH . F 5 HOH A 35 635 71 HOH HOH . F 5 HOH A 36 636 137 HOH HOH . F 5 HOH A 37 637 31 HOH HOH . F 5 HOH A 38 638 110 HOH HOH . F 5 HOH A 39 639 133 HOH HOH . F 5 HOH A 40 640 63 HOH HOH . F 5 HOH A 41 641 24 HOH HOH . F 5 HOH A 42 642 64 HOH HOH . F 5 HOH A 43 643 22 HOH HOH . F 5 HOH A 44 644 42 HOH HOH . F 5 HOH A 45 645 118 HOH HOH . F 5 HOH A 46 646 11 HOH HOH . F 5 HOH A 47 647 48 HOH HOH . F 5 HOH A 48 648 20 HOH HOH . F 5 HOH A 49 649 196 HOH HOH . F 5 HOH A 50 650 2 HOH HOH . F 5 HOH A 51 651 91 HOH HOH . F 5 HOH A 52 652 94 HOH HOH . F 5 HOH A 53 653 111 HOH HOH . F 5 HOH A 54 654 83 HOH HOH . F 5 HOH A 55 655 89 HOH HOH . F 5 HOH A 56 656 41 HOH HOH . F 5 HOH A 57 657 139 HOH HOH . F 5 HOH A 58 658 103 HOH HOH . F 5 HOH A 59 659 93 HOH HOH . F 5 HOH A 60 660 55 HOH HOH . F 5 HOH A 61 661 105 HOH HOH . F 5 HOH A 62 662 4 HOH HOH . F 5 HOH A 63 663 14 HOH HOH . F 5 HOH A 64 664 44 HOH HOH . F 5 HOH A 65 665 166 HOH HOH . F 5 HOH A 66 666 96 HOH HOH . F 5 HOH A 67 667 66 HOH HOH . F 5 HOH A 68 668 101 HOH HOH . F 5 HOH A 69 669 109 HOH HOH . F 5 HOH A 70 670 82 HOH HOH . F 5 HOH A 71 671 27 HOH HOH . F 5 HOH A 72 672 52 HOH HOH . F 5 HOH A 73 673 34 HOH HOH . F 5 HOH A 74 674 15 HOH HOH . F 5 HOH A 75 675 23 HOH HOH . F 5 HOH A 76 676 117 HOH HOH . F 5 HOH A 77 677 102 HOH HOH . F 5 HOH A 78 678 49 HOH HOH . F 5 HOH A 79 679 123 HOH HOH . F 5 HOH A 80 680 8 HOH HOH . F 5 HOH A 81 681 10 HOH HOH . F 5 HOH A 82 682 74 HOH HOH . F 5 HOH A 83 683 57 HOH HOH . F 5 HOH A 84 684 50 HOH HOH . F 5 HOH A 85 685 80 HOH HOH . F 5 HOH A 86 686 119 HOH HOH . F 5 HOH A 87 687 136 HOH HOH . F 5 HOH A 88 688 183 HOH HOH . F 5 HOH A 89 689 69 HOH HOH . F 5 HOH A 90 690 97 HOH HOH . F 5 HOH A 91 691 173 HOH HOH . F 5 HOH A 92 692 216 HOH HOH . F 5 HOH A 93 693 68 HOH HOH . F 5 HOH A 94 694 138 HOH HOH . F 5 HOH A 95 695 87 HOH HOH . F 5 HOH A 96 696 72 HOH HOH . F 5 HOH A 97 697 126 HOH HOH . F 5 HOH A 98 698 81 HOH HOH . F 5 HOH A 99 699 116 HOH HOH . F 5 HOH A 100 700 124 HOH HOH . F 5 HOH A 101 701 58 HOH HOH . F 5 HOH A 102 702 106 HOH HOH . F 5 HOH A 103 703 108 HOH HOH . F 5 HOH A 104 704 86 HOH HOH . F 5 HOH A 105 705 168 HOH HOH . F 5 HOH A 106 706 191 HOH HOH . F 5 HOH A 107 707 100 HOH HOH . F 5 HOH A 108 708 30 HOH HOH . F 5 HOH A 109 709 45 HOH HOH . F 5 HOH A 110 710 28 HOH HOH . F 5 HOH A 111 711 172 HOH HOH . F 5 HOH A 112 712 115 HOH HOH . F 5 HOH A 113 713 17 HOH HOH . F 5 HOH A 114 714 204 HOH HOH . F 5 HOH A 115 715 128 HOH HOH . F 5 HOH A 116 716 33 HOH HOH . F 5 HOH A 117 717 65 HOH HOH . F 5 HOH A 118 718 76 HOH HOH . F 5 HOH A 119 719 127 HOH HOH . F 5 HOH A 120 720 84 HOH HOH . F 5 HOH A 121 721 37 HOH HOH . F 5 HOH A 122 722 78 HOH HOH . F 5 HOH A 123 723 47 HOH HOH . F 5 HOH A 124 724 195 HOH HOH . F 5 HOH A 125 725 121 HOH HOH . F 5 HOH A 126 726 92 HOH HOH . F 5 HOH A 127 727 122 HOH HOH . F 5 HOH A 128 728 79 HOH HOH . F 5 HOH A 129 729 129 HOH HOH . F 5 HOH A 130 730 150 HOH HOH . F 5 HOH A 131 731 174 HOH HOH . F 5 HOH A 132 732 25 HOH HOH . F 5 HOH A 133 733 113 HOH HOH . F 5 HOH A 134 734 135 HOH HOH . F 5 HOH A 135 735 70 HOH HOH . F 5 HOH A 136 736 18 HOH HOH . F 5 HOH A 137 737 169 HOH HOH . F 5 HOH A 138 738 59 HOH HOH . F 5 HOH A 139 739 43 HOH HOH . F 5 HOH A 140 740 215 HOH HOH . F 5 HOH A 141 741 148 HOH HOH . F 5 HOH A 142 742 184 HOH HOH . F 5 HOH A 143 743 142 HOH HOH . F 5 HOH A 144 744 194 HOH HOH . F 5 HOH A 145 745 163 HOH HOH . F 5 HOH A 146 746 98 HOH HOH . F 5 HOH A 147 747 213 HOH HOH . F 5 HOH A 148 748 56 HOH HOH . F 5 HOH A 149 749 141 HOH HOH . F 5 HOH A 150 750 199 HOH HOH . F 5 HOH A 151 751 202 HOH HOH . F 5 HOH A 152 752 171 HOH HOH . F 5 HOH A 153 753 77 HOH HOH . F 5 HOH A 154 754 1 HOH HOH . F 5 HOH A 155 755 104 HOH HOH . F 5 HOH A 156 756 161 HOH HOH . F 5 HOH A 157 757 205 HOH HOH . F 5 HOH A 158 758 192 HOH HOH . F 5 HOH A 159 759 200 HOH HOH . F 5 HOH A 160 760 188 HOH HOH . F 5 HOH A 161 761 9 HOH HOH . F 5 HOH A 162 762 209 HOH HOH . F 5 HOH A 163 763 158 HOH HOH . F 5 HOH A 164 764 160 HOH HOH . F 5 HOH A 165 765 134 HOH HOH . F 5 HOH A 166 766 201 HOH HOH . F 5 HOH A 167 767 185 HOH HOH . F 5 HOH A 168 768 208 HOH HOH . F 5 HOH A 169 769 214 HOH HOH . F 5 HOH A 170 770 218 HOH HOH . F 5 HOH A 171 771 210 HOH HOH . F 5 HOH A 172 772 220 HOH HOH . F 5 HOH A 173 773 177 HOH HOH . F 5 HOH A 174 774 144 HOH HOH . F 5 HOH A 175 775 182 HOH HOH . F 5 HOH A 176 776 219 HOH HOH . F 5 HOH A 177 777 85 HOH HOH . F 5 HOH A 178 778 154 HOH HOH . F 5 HOH A 179 779 164 HOH HOH . F 5 HOH A 180 780 176 HOH HOH . F 5 HOH A 181 781 131 HOH HOH . F 5 HOH A 182 782 153 HOH HOH . F 5 HOH A 183 783 147 HOH HOH . F 5 HOH A 184 784 179 HOH HOH . F 5 HOH A 185 785 217 HOH HOH . F 5 HOH A 186 786 189 HOH HOH . F 5 HOH A 187 787 178 HOH HOH . F 5 HOH A 188 788 152 HOH HOH . F 5 HOH A 189 789 193 HOH HOH . F 5 HOH A 190 790 145 HOH HOH . F 5 HOH A 191 791 186 HOH HOH . F 5 HOH A 192 792 187 HOH HOH . F 5 HOH A 193 793 125 HOH HOH . F 5 HOH A 194 794 35 HOH HOH . F 5 HOH A 195 795 162 HOH HOH . F 5 HOH A 196 796 32 HOH HOH . F 5 HOH A 197 797 120 HOH HOH . F 5 HOH A 198 798 159 HOH HOH . F 5 HOH A 199 799 197 HOH HOH . F 5 HOH A 200 800 212 HOH HOH . F 5 HOH A 201 801 180 HOH HOH . F 5 HOH A 202 802 167 HOH HOH . F 5 HOH A 203 803 75 HOH HOH . F 5 HOH A 204 804 206 HOH HOH . F 5 HOH A 205 805 157 HOH HOH . F 5 HOH A 206 806 198 HOH HOH . F 5 HOH A 207 807 61 HOH HOH . F 5 HOH A 208 808 203 HOH HOH . F 5 HOH A 209 809 165 HOH HOH . F 5 HOH A 210 810 207 HOH HOH . F 5 HOH A 211 811 155 HOH HOH . F 5 HOH A 212 812 181 HOH HOH . F 5 HOH A 213 813 170 HOH HOH . F 5 HOH A 214 814 190 HOH HOH . F 5 HOH A 215 815 146 HOH HOH . F 5 HOH A 216 816 211 HOH HOH . F 5 HOH A 217 817 143 HOH HOH . F 5 HOH A 218 818 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -26.003 _atom_site.Cartn_y 26.252 _atom_site.Cartn_z -3.219 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 504 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #