data_6WCR # _model_server_result.job_id fsSMYyb10TJX09W4w-wFBg _model_server_result.datetime_utc '2024-10-18 00:37:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":203}' # _entry.id 6WCR # _exptl.entry_id 6WCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 336.213 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2,4-dichlorophenyl)[(2S)-2-phenylmorpholin-4-yl]methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WCR _cell.length_a 160.096 _cell.length_b 160.096 _cell.length_c 160.096 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall 'I 2b 2c 3' _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 C 1 NAG A 326 NAG 3 n C NAG 2 C 2 NAG A 327 NAG 3 n C BMA 3 C 3 BMA A 328 BMA 4 n D NAG 1 D 1 NAG B 172 NAG 4 n D NAG 2 D 2 NAG B 173 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 14 1_555 B SG CYS 137 B CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 42 A CYS 52 1_555 A SG CYS 274 A CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 55 A CYS 64 1_555 A SG CYS 67 A CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 90 A CYS 97 1_555 A SG CYS 135 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 278 A CYS 281 1_555 A SG CYS 302 A CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 B SG CYS 144 B CYS 144 1_555 B SG CYS 148 B CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 11 A ASN 21 1_555 F C1 NAG . A NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale2 A ND2 ASN 23 A ASN 33 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 A ND2 ASN 286 A ASN 289 1_555 E C1 NAG . A NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 B ND2 ASN 154 B ASN 154 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale6 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale7 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? # _chem_comp.formula 'C17 H15 Cl2 N O2' _chem_comp.formula_weight 336.213 _chem_comp.id TU7 _chem_comp.mon_nstd_flag . _chem_comp.name (2,4-dichlorophenyl)[(2S)-2-phenylmorpholin-4-yl]methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL12 C06 TU7 sing 388 n n C32 C31 TU7 doub 389 n y C32 C26 TU7 sing 390 n y C31 C30 TU7 sing 391 n y C15 C26 TU7 sing 392 n n C15 O18 TU7 sing 393 n n C15 C14 TU7 sing 394 n n C26 C28 TU7 doub 395 n y C30 C29 TU7 doub 396 n y C06 C01 TU7 doub 397 n y C06 C05 TU7 sing 398 n y C01 C02 TU7 sing 399 n y C19 O18 TU7 sing 400 n n C19 C20 TU7 sing 401 n n C14 N13 TU7 sing 402 n n N13 C20 TU7 sing 403 n n N13 C11 TU7 sing 404 n n O25 C11 TU7 doub 405 n n C11 C05 TU7 sing 406 n n C28 C29 TU7 sing 407 n y C05 C04 TU7 doub 408 n y C02 CL08 TU7 sing 409 n n C02 C03 TU7 doub 410 n y C04 C03 TU7 sing 411 n y C14 H1 TU7 sing 412 n n C14 H2 TU7 sing 413 n n C15 H3 TU7 sing 414 n n C01 H4 TU7 sing 415 n n C03 H5 TU7 sing 416 n n C04 H6 TU7 sing 417 n n C19 H7 TU7 sing 418 n n C19 H8 TU7 sing 419 n n C20 H9 TU7 sing 420 n n C20 H10 TU7 sing 421 n n C28 H11 TU7 sing 422 n n C29 H12 TU7 sing 423 n n C30 H13 TU7 sing 424 n n C31 H14 TU7 sing 425 n n C32 H15 TU7 sing 426 n n # _atom_sites.entry_id 6WCR _atom_sites.fract_transf_matrix[1][1] 0.006246 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG A 1 404 329 NAG NAG . F 5 NAG A 1 405 330 NAG NAG . G 6 TU7 B 1 203 1 TU7 F45 . H 7 HOH A 1 501 7 HOH HOH . H 7 HOH A 2 502 18 HOH HOH . H 7 HOH A 3 503 2 HOH HOH . H 7 HOH A 4 504 1 HOH HOH . H 7 HOH A 5 505 5 HOH HOH . H 7 HOH A 6 506 21 HOH HOH . H 7 HOH A 7 507 23 HOH HOH . H 7 HOH A 8 508 14 HOH HOH . H 7 HOH A 9 509 31 HOH HOH . H 7 HOH A 10 510 24 HOH HOH . H 7 HOH A 11 511 25 HOH HOH . H 7 HOH A 12 512 36 HOH HOH . H 7 HOH A 13 513 26 HOH HOH . H 7 HOH A 14 514 11 HOH HOH . H 7 HOH A 15 515 22 HOH HOH . H 7 HOH A 16 516 33 HOH HOH . H 7 HOH A 17 517 28 HOH HOH . H 7 HOH A 18 518 30 HOH HOH . H 7 HOH A 19 519 6 HOH HOH . H 7 HOH A 20 520 35 HOH HOH . H 7 HOH A 21 521 13 HOH HOH . I 7 HOH B 1 301 3 HOH HOH . I 7 HOH B 2 302 19 HOH HOH . I 7 HOH B 3 303 4 HOH HOH . I 7 HOH B 4 304 32 HOH HOH . I 7 HOH B 5 305 16 HOH HOH . I 7 HOH B 6 306 8 HOH HOH . I 7 HOH B 7 307 27 HOH HOH . I 7 HOH B 8 308 10 HOH HOH . I 7 HOH B 9 309 34 HOH HOH . I 7 HOH B 10 310 12 HOH HOH . I 7 HOH B 11 311 17 HOH HOH . I 7 HOH B 12 312 29 HOH HOH . I 7 HOH B 13 313 20 HOH HOH . I 7 HOH B 14 314 15 HOH HOH . I 7 HOH B 15 315 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 TU7 . . . G 6 -35.213 -53.004 -23.735 1 46.72 ? C11 TU7 203 B 1 HETATM 2 C C14 TU7 . . . G 6 -36.59 -55.09 -24.043 1 43.59 ? C14 TU7 203 B 1 HETATM 3 C C15 TU7 . . . G 6 -36.45 -56.41 -24.807 1 48.75 ? C15 TU7 203 B 1 HETATM 4 C C01 TU7 . . . G 6 -31.823 -51.436 -24.492 1 36.01 ? C01 TU7 203 B 1 HETATM 5 C C02 TU7 . . . G 6 -31.448 -50.962 -23.247 1 32.75 ? C02 TU7 203 B 1 HETATM 6 C C03 TU7 . . . G 6 -32.28 -51.144 -22.155 1 37.21 ? C03 TU7 203 B 1 HETATM 7 C C04 TU7 . . . G 6 -33.493 -51.8 -22.306 1 40.76 ? C04 TU7 203 B 1 HETATM 8 C C05 TU7 . . . G 6 -33.867 -52.28 -23.553 1 39.36 ? C05 TU7 203 B 1 HETATM 9 C C06 TU7 . . . G 6 -33.034 -52.092 -24.645 1 38.45 ? C06 TU7 203 B 1 HETATM 10 C C19 TU7 . . . G 6 -34.207 -56.608 -24.483 1 38.18 ? C19 TU7 203 B 1 HETATM 11 C C20 TU7 . . . G 6 -34.05 -55.248 -23.816 1 40.21 ? C20 TU7 203 B 1 HETATM 12 C C26 TU7 . . . G 6 -37.777 -57.176 -24.783 1 50.39 ? C26 TU7 203 B 1 HETATM 13 C C28 TU7 . . . G 6 -38.077 -58.021 -23.726 1 41.23 ? C28 TU7 203 B 1 HETATM 14 C C29 TU7 . . . G 6 -39.278 -58.712 -23.711 1 46.67 ? C29 TU7 203 B 1 HETATM 15 C C30 TU7 . . . G 6 -40.18 -58.561 -24.753 1 48.93 ? C30 TU7 203 B 1 HETATM 16 C C31 TU7 . . . G 6 -39.881 -57.716 -25.811 1 50.27 ? C31 TU7 203 B 1 HETATM 17 C C32 TU7 . . . G 6 -38.679 -57.026 -25.825 1 49.53 ? C32 TU7 203 B 1 HETATM 18 N N13 TU7 . . . G 6 -35.279 -54.46 -23.86 1 46.01 ? N13 TU7 203 B 1 HETATM 19 O O18 TU7 . . . G 6 -35.449 -57.169 -24.207 1 45.65 ? O18 TU7 203 B 1 HETATM 20 O O25 TU7 . . . G 6 -36.211 -52.372 -23.779 1 48.99 ? O25 TU7 203 B 1 HETATM 21 CL CL08 TU7 . . . G 6 -29.889 -50.116 -23.054 1 54.53 ? CL08 TU7 203 B 1 HETATM 22 CL CL12 TU7 . . . G 6 -33.518 -52.705 -26.249 1 50.79 ? CL12 TU7 203 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 22 #