data_6WE4 # _model_server_result.job_id q4GRrT2MSL8v4XL9GUC6rw _model_server_result.datetime_utc '2025-01-10 12:32:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6we4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1901}' # _entry.id 6WE4 # _exptl.entry_id 6WE4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 206.264 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methyl-3,5,6,7-tetrahydro-4H-cyclopenta[4,5]thieno[2,3-d]pyrimidin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WE4 _cell.length_a 40.107 _cell.length_b 67.109 _cell.length_c 144.832 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 11 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 1618 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 11 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 1618 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.078 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H10 N2 O S' _chem_comp.formula_weight 206.264 _chem_comp.id FDR _chem_comp.mon_nstd_flag . _chem_comp.name 2-methyl-3,5,6,7-tetrahydro-4H-cyclopenta[4,5]thieno[2,3-d]pyrimidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAI FDR sing 92 n n CAA HAA FDR sing 93 n n CAA HAAA FDR sing 94 n n CAA HAAB FDR sing 95 n n CAL OAB FDR doub 96 n n CAE CAC FDR sing 97 n n CAD CAC FDR sing 98 n n CAC HAC FDR sing 99 n n CAC HACA FDR sing 100 n n CAJ CAD FDR sing 101 n n CAD HAD FDR sing 102 n n CAD HADA FDR sing 103 n n CAK CAE FDR sing 104 n n CAE HAE FDR sing 105 n n CAE HAEA FDR sing 106 n n CAI NAF FDR doub 107 n n NAF CAM FDR sing 108 n n CAI NAG FDR sing 109 n n NAG CAL FDR sing 110 n n NAG HNAG FDR sing 111 n n CAM SAH FDR sing 112 n y SAH CAJ FDR sing 113 n y CAK CAJ FDR doub 114 n y CAN CAK FDR sing 115 n y CAL CAN FDR sing 116 n n CAM CAN FDR doub 117 n y # _atom_sites.entry_id 6WE4 _atom_sites.fract_transf_matrix[1][1] 0.024933 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FDR A 1 1901 1 FDR 152 . D 3 EDO A 1 1902 1 EDO EDO . E 3 EDO A 1 1903 2 EDO EDO . F 3 EDO A 1 1904 4 EDO EDO . G 3 EDO A 1 1905 8 EDO EDO . H 3 EDO A 1 1906 9 EDO EDO . I 3 EDO A 1 1907 10 EDO EDO . J 4 TYG B 1 1901 1 TYG LIG . K 5 GOL B 1 1902 1 GOL GOL . L 5 GOL B 1 1903 2 GOL GOL . M 3 EDO B 1 1904 3 EDO EDO . N 3 EDO B 1 1905 5 EDO EDO . O 3 EDO B 1 1906 6 EDO EDO . P 3 EDO B 1 1907 7 EDO EDO . Q 6 HOH A 1 2001 119 HOH HOH . Q 6 HOH A 2 2002 193 HOH HOH . Q 6 HOH A 3 2003 157 HOH HOH . Q 6 HOH A 4 2004 180 HOH HOH . Q 6 HOH A 5 2005 127 HOH HOH . Q 6 HOH A 6 2006 81 HOH HOH . Q 6 HOH A 7 2007 109 HOH HOH . Q 6 HOH A 8 2008 30 HOH HOH . Q 6 HOH A 9 2009 61 HOH HOH . Q 6 HOH A 10 2010 25 HOH HOH . Q 6 HOH A 11 2011 153 HOH HOH . Q 6 HOH A 12 2012 158 HOH HOH . Q 6 HOH A 13 2013 39 HOH HOH . Q 6 HOH A 14 2014 83 HOH HOH . Q 6 HOH A 15 2015 125 HOH HOH . Q 6 HOH A 16 2016 27 HOH HOH . Q 6 HOH A 17 2017 144 HOH HOH . Q 6 HOH A 18 2018 184 HOH HOH . Q 6 HOH A 19 2019 32 HOH HOH . Q 6 HOH A 20 2020 68 HOH HOH . Q 6 HOH A 21 2021 55 HOH HOH . Q 6 HOH A 22 2022 100 HOH HOH . Q 6 HOH A 23 2023 170 HOH HOH . Q 6 HOH A 24 2024 69 HOH HOH . Q 6 HOH A 25 2025 22 HOH HOH . Q 6 HOH A 26 2026 67 HOH HOH . Q 6 HOH A 27 2027 178 HOH HOH . Q 6 HOH A 28 2028 23 HOH HOH . Q 6 HOH A 29 2029 18 HOH HOH . Q 6 HOH A 30 2030 98 HOH HOH . Q 6 HOH A 31 2031 118 HOH HOH . Q 6 HOH A 32 2032 190 HOH HOH . Q 6 HOH A 33 2033 78 HOH HOH . Q 6 HOH A 34 2034 21 HOH HOH . Q 6 HOH A 35 2035 65 HOH HOH . Q 6 HOH A 36 2036 63 HOH HOH . Q 6 HOH A 37 2037 101 HOH HOH . Q 6 HOH A 38 2038 26 HOH HOH . Q 6 HOH A 39 2039 77 HOH HOH . Q 6 HOH A 40 2040 44 HOH HOH . Q 6 HOH A 41 2041 149 HOH HOH . Q 6 HOH A 42 2042 133 HOH HOH . Q 6 HOH A 43 2043 16 HOH HOH . Q 6 HOH A 44 2044 194 HOH HOH . Q 6 HOH A 45 2045 171 HOH HOH . Q 6 HOH A 46 2046 148 HOH HOH . Q 6 HOH A 47 2047 14 HOH HOH . Q 6 HOH A 48 2048 76 HOH HOH . Q 6 HOH A 49 2049 89 HOH HOH . Q 6 HOH A 50 2050 2 HOH HOH . Q 6 HOH A 51 2051 110 HOH HOH . Q 6 HOH A 52 2052 3 HOH HOH . Q 6 HOH A 53 2053 13 HOH HOH . Q 6 HOH A 54 2054 87 HOH HOH . Q 6 HOH A 55 2055 64 HOH HOH . Q 6 HOH A 56 2056 188 HOH HOH . Q 6 HOH A 57 2057 90 HOH HOH . Q 6 HOH A 58 2058 179 HOH HOH . Q 6 HOH A 59 2059 20 HOH HOH . Q 6 HOH A 60 2060 103 HOH HOH . Q 6 HOH A 61 2061 106 HOH HOH . Q 6 HOH A 62 2062 191 HOH HOH . Q 6 HOH A 63 2063 102 HOH HOH . Q 6 HOH A 64 2064 168 HOH HOH . Q 6 HOH A 65 2065 71 HOH HOH . Q 6 HOH A 66 2066 79 HOH HOH . Q 6 HOH A 67 2067 156 HOH HOH . Q 6 HOH A 68 2068 53 HOH HOH . Q 6 HOH A 69 2069 122 HOH HOH . Q 6 HOH A 70 2070 198 HOH HOH . Q 6 HOH A 71 2071 72 HOH HOH . Q 6 HOH A 72 2072 114 HOH HOH . Q 6 HOH A 73 2073 187 HOH HOH . Q 6 HOH A 74 2074 145 HOH HOH . Q 6 HOH A 75 2075 154 HOH HOH . Q 6 HOH A 76 2076 151 HOH HOH . Q 6 HOH A 77 2077 192 HOH HOH . Q 6 HOH A 78 2078 186 HOH HOH . Q 6 HOH A 79 2079 152 HOH HOH . Q 6 HOH A 80 2080 155 HOH HOH . R 6 HOH B 1 2001 160 HOH HOH . R 6 HOH B 2 2002 70 HOH HOH . R 6 HOH B 3 2003 91 HOH HOH . R 6 HOH B 4 2004 164 HOH HOH . R 6 HOH B 5 2005 120 HOH HOH . R 6 HOH B 6 2006 29 HOH HOH . R 6 HOH B 7 2007 177 HOH HOH . R 6 HOH B 8 2008 41 HOH HOH . R 6 HOH B 9 2009 128 HOH HOH . R 6 HOH B 10 2010 197 HOH HOH . R 6 HOH B 11 2011 126 HOH HOH . R 6 HOH B 12 2012 162 HOH HOH . R 6 HOH B 13 2013 34 HOH HOH . R 6 HOH B 14 2014 84 HOH HOH . R 6 HOH B 15 2015 45 HOH HOH . R 6 HOH B 16 2016 51 HOH HOH . R 6 HOH B 17 2017 176 HOH HOH . R 6 HOH B 18 2018 183 HOH HOH . R 6 HOH B 19 2019 134 HOH HOH . R 6 HOH B 20 2020 35 HOH HOH . R 6 HOH B 21 2021 105 HOH HOH . R 6 HOH B 22 2022 116 HOH HOH . R 6 HOH B 23 2023 85 HOH HOH . R 6 HOH B 24 2024 19 HOH HOH . R 6 HOH B 25 2025 8 HOH HOH . R 6 HOH B 26 2026 58 HOH HOH . R 6 HOH B 27 2027 140 HOH HOH . R 6 HOH B 28 2028 15 HOH HOH . R 6 HOH B 29 2029 94 HOH HOH . R 6 HOH B 30 2030 163 HOH HOH . R 6 HOH B 31 2031 142 HOH HOH . R 6 HOH B 32 2032 196 HOH HOH . R 6 HOH B 33 2033 52 HOH HOH . R 6 HOH B 34 2034 135 HOH HOH . R 6 HOH B 35 2035 28 HOH HOH . R 6 HOH B 36 2036 189 HOH HOH . R 6 HOH B 37 2037 82 HOH HOH . R 6 HOH B 38 2038 121 HOH HOH . R 6 HOH B 39 2039 113 HOH HOH . R 6 HOH B 40 2040 11 HOH HOH . R 6 HOH B 41 2041 132 HOH HOH . R 6 HOH B 42 2042 59 HOH HOH . R 6 HOH B 43 2043 4 HOH HOH . R 6 HOH B 44 2044 42 HOH HOH . R 6 HOH B 45 2045 7 HOH HOH . R 6 HOH B 46 2046 17 HOH HOH . R 6 HOH B 47 2047 74 HOH HOH . R 6 HOH B 48 2048 147 HOH HOH . R 6 HOH B 49 2049 43 HOH HOH . R 6 HOH B 50 2050 66 HOH HOH . R 6 HOH B 51 2051 96 HOH HOH . R 6 HOH B 52 2052 60 HOH HOH . R 6 HOH B 53 2053 62 HOH HOH . R 6 HOH B 54 2054 50 HOH HOH . R 6 HOH B 55 2055 9 HOH HOH . R 6 HOH B 56 2056 12 HOH HOH . R 6 HOH B 57 2057 48 HOH HOH . R 6 HOH B 58 2058 47 HOH HOH . R 6 HOH B 59 2059 10 HOH HOH . R 6 HOH B 60 2060 40 HOH HOH . R 6 HOH B 61 2061 31 HOH HOH . R 6 HOH B 62 2062 75 HOH HOH . R 6 HOH B 63 2063 143 HOH HOH . R 6 HOH B 64 2064 38 HOH HOH . R 6 HOH B 65 2065 138 HOH HOH . R 6 HOH B 66 2066 1 HOH HOH . R 6 HOH B 67 2067 49 HOH HOH . R 6 HOH B 68 2068 93 HOH HOH . R 6 HOH B 69 2069 99 HOH HOH . R 6 HOH B 70 2070 95 HOH HOH . R 6 HOH B 71 2071 161 HOH HOH . R 6 HOH B 72 2072 88 HOH HOH . R 6 HOH B 73 2073 173 HOH HOH . R 6 HOH B 74 2074 92 HOH HOH . R 6 HOH B 75 2075 146 HOH HOH . R 6 HOH B 76 2076 33 HOH HOH . R 6 HOH B 77 2077 54 HOH HOH . R 6 HOH B 78 2078 117 HOH HOH . R 6 HOH B 79 2079 36 HOH HOH . R 6 HOH B 80 2080 107 HOH HOH . R 6 HOH B 81 2081 166 HOH HOH . R 6 HOH B 82 2082 56 HOH HOH . R 6 HOH B 83 2083 97 HOH HOH . R 6 HOH B 84 2084 24 HOH HOH . R 6 HOH B 85 2085 169 HOH HOH . R 6 HOH B 86 2086 150 HOH HOH . R 6 HOH B 87 2087 181 HOH HOH . R 6 HOH B 88 2088 5 HOH HOH . R 6 HOH B 89 2089 174 HOH HOH . R 6 HOH B 90 2090 112 HOH HOH . R 6 HOH B 91 2091 80 HOH HOH . R 6 HOH B 92 2092 57 HOH HOH . R 6 HOH B 93 2093 108 HOH HOH . R 6 HOH B 94 2094 104 HOH HOH . R 6 HOH B 95 2095 159 HOH HOH . R 6 HOH B 96 2096 172 HOH HOH . R 6 HOH B 97 2097 167 HOH HOH . R 6 HOH B 98 2098 6 HOH HOH . R 6 HOH B 99 2099 141 HOH HOH . R 6 HOH B 100 2100 136 HOH HOH . R 6 HOH B 101 2101 137 HOH HOH . R 6 HOH B 102 2102 124 HOH HOH . R 6 HOH B 103 2103 46 HOH HOH . R 6 HOH B 104 2104 86 HOH HOH . R 6 HOH B 105 2105 139 HOH HOH . R 6 HOH B 106 2106 165 HOH HOH . R 6 HOH B 107 2107 182 HOH HOH . R 6 HOH B 108 2108 130 HOH HOH . R 6 HOH B 109 2109 111 HOH HOH . R 6 HOH B 110 2110 37 HOH HOH . R 6 HOH B 111 2111 185 HOH HOH . R 6 HOH B 112 2112 73 HOH HOH . R 6 HOH B 113 2113 131 HOH HOH . R 6 HOH B 114 2114 123 HOH HOH . R 6 HOH B 115 2115 175 HOH HOH . R 6 HOH B 116 2116 129 HOH HOH . R 6 HOH B 117 2117 195 HOH HOH . R 6 HOH B 118 2118 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA FDR . . . C 2 20.747 -10.15 -42.094 1 33.84 ? CAA FDR 1901 A 1 HETATM 2 O OAB FDR . . . C 2 16.994 -11.59 -44.635 1 28.54 ? OAB FDR 1901 A 1 HETATM 3 C CAC FDR . . . C 2 18.064 -13.007 -49.067 1 31.13 ? CAC FDR 1901 A 1 HETATM 4 C CAD FDR . . . C 2 19.591 -12.772 -49.11 1 31.53 ? CAD FDR 1901 A 1 HETATM 5 C CAE FDR . . . C 2 17.62 -12.567 -47.659 1 29.33 ? CAE FDR 1901 A 1 HETATM 6 N NAF FDR . . . C 2 20.966 -10.892 -44.363 1 32.38 ? NAF FDR 1901 A 1 HETATM 7 N NAG FDR . . . C 2 18.786 -10.888 -43.46 1 32.99 ? NAG FDR 1901 A 1 HETATM 8 S SAH FDR . . . C 2 21.438 -11.743 -46.978 1 33.54 ? SAH FDR 1901 A 1 HETATM 9 C CAI FDR . . . C 2 20.14 -10.662 -43.374 1 33.17 ? CAI FDR 1901 A 1 HETATM 10 C CAJ FDR . . . C 2 19.946 -12.243 -47.755 1 30.23 ? CAJ FDR 1901 A 1 HETATM 11 C CAK FDR . . . C 2 18.871 -12.115 -46.973 1 30.6 ? CAK FDR 1901 A 1 HETATM 12 C CAL FDR . . . C 2 18.222 -11.378 -44.582 1 32.28 ? CAL FDR 1901 A 1 HETATM 13 C CAM FDR . . . C 2 20.515 -11.356 -45.526 1 29.45 ? CAM FDR 1901 A 1 HETATM 14 C CAN FDR . . . C 2 19.144 -11.613 -45.665 1 30.18 ? CAN FDR 1901 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #