data_6WEJ
#
_model_server_result.job_id            oLirdOFu_kbSzwg6ZCJM3g 
_model_server_result.datetime_utc      '2024-11-29 22:47:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wej 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":804}' 
#
_entry.id    6WEJ 
#
_exptl.entry_id    6WEJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              758.06 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    24 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WEJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WEJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 N N N 
? 2 O N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 V N N 
? 2 W N N 
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 DA N N 
? 2 EA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 JA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 157 A CYS 157 1_555 A SG CYS 172 A CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf2 B SG CYS 157 B CYS 157 1_555 B SG CYS 172 B CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf3 C SG CYS 157 C CYS 157 1_555 C SG CYS 172 C CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 D SG CYS 157 D CYS 157 1_555 D SG CYS 172 D CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc1 A OE1 GLU 379 A GLU 379 1_555 M NA NA . A NA 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.127 ? 
metalc ? metalc2 A OE2 GLU 379 A GLU 379 1_555 M NA NA . A NA 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? 
metalc ? metalc3 M NA NA . A NA 809 1_555 B OE1 GLU 379 B GLU 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.142 ? 
metalc ? metalc4 M NA NA . A NA 809 1_555 B OE2 GLU 379 B GLU 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? 
metalc ? metalc5 M NA NA . A NA 809 1_555 C OE1 GLU 379 C GLU 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.078 ? 
metalc ? metalc6 M NA NA . A NA 809 1_555 C OE2 GLU 379 C GLU 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? 
metalc ? metalc7 M NA NA . A NA 809 1_555 D OE1 GLU 379 D GLU 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? 
metalc ? metalc8 M NA NA . A NA 809 1_555 D OE2 GLU 379 D GLU 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? 
#
_chem_comp.formula           'C42 H80 N O8 P' 
_chem_comp.formula_weight    758.06 
_chem_comp.id                CPL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'PALMITOYL-LINOLEOYL PHOSPHATIDYLCHOLINE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CPL sing 70 n n 
C1 O3P CPL sing 71 n n 
C1 HC11 CPL sing 72 n n 
C1 HC12 CPL sing 73 n n 
C2 C3 CPL sing 74 n n 
C2 O2 CPL sing 75 n n 
C2 HC2 CPL sing 76 n n 
C3 O3 CPL sing 77 n n 
C3 HC31 CPL sing 78 n n 
C3 HC32 CPL sing 79 n n 
C4 C5 CPL sing 80 n n 
C4 O4P CPL sing 81 n n 
C4 HC41 CPL sing 82 n n 
C4 HC42 CPL sing 83 n n 
C5 N CPL sing 84 n n 
C5 HC51 CPL sing 85 n n 
C5 HC52 CPL sing 86 n n 
C6 N CPL sing 87 n n 
C6 HC61 CPL sing 88 n n 
C6 HC62 CPL sing 89 n n 
C6 HC63 CPL sing 90 n n 
C7 N CPL sing 91 n n 
C7 HC71 CPL sing 92 n n 
C7 HC72 CPL sing 93 n n 
C7 HC73 CPL sing 94 n n 
C8 N CPL sing 95 n n 
C8 HC81 CPL sing 96 n n 
C8 HC82 CPL sing 97 n n 
C8 HC83 CPL sing 98 n n 
C11 C12 CPL sing 99 n n 
C11 O3 CPL sing 100 n n 
C11 O11 CPL doub 101 n n 
C12 C13 CPL sing 102 n n 
C12 H121 CPL sing 103 n n 
C12 H122 CPL sing 104 n n 
C13 C14 CPL sing 105 n n 
C13 H131 CPL sing 106 n n 
C13 H132 CPL sing 107 n n 
C14 C15 CPL sing 108 n n 
C14 H141 CPL sing 109 n n 
C14 H142 CPL sing 110 n n 
C15 C16 CPL sing 111 n n 
C15 H151 CPL sing 112 n n 
C15 H152 CPL sing 113 n n 
C16 C17 CPL sing 114 n n 
C16 H161 CPL sing 115 n n 
C16 H162 CPL sing 116 n n 
C17 C18 CPL sing 117 n n 
C17 H171 CPL sing 118 n n 
C17 H172 CPL sing 119 n n 
C18 C19 CPL sing 120 n n 
C18 H181 CPL sing 121 n n 
C18 H182 CPL sing 122 n n 
C19 C20 CPL sing 123 n n 
C19 H191 CPL sing 124 n n 
C19 H192 CPL sing 125 n n 
C20 C21 CPL sing 126 n n 
C20 H201 CPL sing 127 n n 
C20 H202 CPL sing 128 n n 
C21 C22 CPL sing 129 n n 
C21 H211 CPL sing 130 n n 
C21 H212 CPL sing 131 n n 
C22 C23 CPL sing 132 n n 
C22 H221 CPL sing 133 n n 
C22 H222 CPL sing 134 n n 
C23 C24 CPL sing 135 n n 
C23 H231 CPL sing 136 n n 
C23 H232 CPL sing 137 n n 
C24 C25 CPL sing 138 n n 
C24 H241 CPL sing 139 n n 
C24 H242 CPL sing 140 n n 
C25 C26 CPL sing 141 n n 
C25 H251 CPL sing 142 n n 
C25 H252 CPL sing 143 n n 
C26 H261 CPL sing 144 n n 
C26 H262 CPL sing 145 n n 
C26 H263 CPL sing 146 n n 
C31 C32 CPL sing 147 n n 
C31 O2 CPL sing 148 n n 
C31 O31 CPL doub 149 n n 
C32 C33 CPL sing 150 n n 
C32 H321 CPL sing 151 n n 
C32 H322 CPL sing 152 n n 
C33 C34 CPL sing 153 n n 
C33 H331 CPL sing 154 n n 
C33 H332 CPL sing 155 n n 
C34 C35 CPL sing 156 n n 
C34 H341 CPL sing 157 n n 
C34 H342 CPL sing 158 n n 
C35 C36 CPL sing 159 n n 
C35 H351 CPL sing 160 n n 
C35 H352 CPL sing 161 n n 
C36 C37 CPL sing 162 n n 
C36 H361 CPL sing 163 n n 
C36 H362 CPL sing 164 n n 
C37 C38 CPL sing 165 n n 
C37 H371 CPL sing 166 n n 
C37 H372 CPL sing 167 n n 
C38 C39 CPL sing 168 n n 
C38 H381 CPL sing 169 n n 
C38 H382 CPL sing 170 n n 
C39 C40 CPL doub 171 z n 
C39 H39 CPL sing 172 n n 
C40 C41 CPL sing 173 n n 
C40 H40 CPL sing 174 n n 
C41 C42 CPL sing 175 n n 
C41 H411 CPL sing 176 n n 
C41 H412 CPL sing 177 n n 
C42 C43 CPL doub 178 z n 
C42 H42 CPL sing 179 n n 
C43 C44 CPL sing 180 n n 
C43 H43 CPL sing 181 n n 
C44 C45 CPL sing 182 n n 
C44 H441 CPL sing 183 n n 
C44 H442 CPL sing 184 n n 
C45 C46 CPL sing 185 n n 
C45 H451 CPL sing 186 n n 
C45 H452 CPL sing 187 n n 
C46 C47 CPL sing 188 n n 
C46 H461 CPL sing 189 n n 
C46 H462 CPL sing 190 n n 
C47 C48 CPL sing 191 n n 
C47 H471 CPL sing 192 n n 
C47 H472 CPL sing 193 n n 
C48 H481 CPL sing 194 n n 
C48 H482 CPL sing 195 n n 
C48 H483 CPL sing 196 n n 
O1P P CPL doub 197 n n 
O2P P CPL sing 198 n n 
O3P P CPL sing 199 n n 
O4P P CPL sing 200 n n 
#
_atom_sites.entry_id                     6WEJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CPL A 1 801 701 CPL CPL . 
F 2 CPL A 1 802 801 CPL CPL . 
G 3 PX2 A 1 803 901 PX2 PX2 . 
H 2 CPL A 1 804 1001 CPL CPL . 
I 2 CPL A 1 805 1101 CPL CPL . 
J 2 CPL A 1 806 1201 CPL CPL . 
K 2 CPL A 1 807 1301 CPL CPL . 
L 3 PX2 A 1 808 1601 PX2 PX2 . 
M 4 NA A 1 809 1 NA NA . 
N 2 CPL B 1 801 701 CPL CPL . 
O 2 CPL B 1 802 801 CPL CPL . 
P 3 PX2 B 1 803 901 PX2 PX2 . 
Q 2 CPL B 1 804 1001 CPL CPL . 
R 2 CPL B 1 805 1101 CPL CPL . 
S 2 CPL B 1 806 1201 CPL CPL . 
T 2 CPL B 1 807 1301 CPL CPL . 
U 3 PX2 B 1 808 1601 PX2 PX2 . 
V 2 CPL C 1 801 701 CPL CPL . 
W 2 CPL C 1 802 801 CPL CPL . 
X 3 PX2 C 1 803 901 PX2 PX2 . 
Y 2 CPL C 1 804 1001 CPL CPL . 
Z 2 CPL C 1 805 1101 CPL CPL . 
AA 2 CPL C 1 806 1201 CPL CPL . 
BA 2 CPL C 1 807 1301 CPL CPL . 
CA 3 PX2 C 1 808 1601 PX2 PX2 . 
DA 2 CPL D 1 801 701 CPL CPL . 
EA 2 CPL D 1 802 801 CPL CPL . 
FA 3 PX2 D 1 803 901 PX2 PX2 . 
GA 2 CPL D 1 804 1001 CPL CPL . 
HA 2 CPL D 1 805 1101 CPL CPL . 
IA 2 CPL D 1 806 1201 CPL CPL . 
JA 2 CPL D 1 807 1301 CPL CPL . 
KA 3 PX2 D 1 808 1601 PX2 PX2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C12 CPL . . . Q 2 150.533 129.802 182.327 1 49.22 ? C12 CPL 804 B 1 
HETATM 2 C C13 CPL . . . Q 2 150.986 130.825 181.286 1 49.22 ? C13 CPL 804 B 1 
HETATM 3 C C14 CPL . . . Q 2 151.69 131.989 181.98 1 49.22 ? C14 CPL 804 B 1 
HETATM 4 C C15 CPL . . . Q 2 151.926 133.115 180.975 1 49.22 ? C15 CPL 804 B 1 
HETATM 5 C C16 CPL . . . Q 2 153.098 133.976 181.434 1 49.22 ? C16 CPL 804 B 1 
HETATM 6 C C17 CPL . . . Q 2 153.314 135.106 180.434 1 49.22 ? C17 CPL 804 B 1 
HETATM 7 C C18 CPL . . . Q 2 154.803 135.266 180.154 1 49.22 ? C18 CPL 804 B 1 
HETATM 8 C C19 CPL . . . Q 2 154.987 135.798 178.738 1 49.22 ? C19 CPL 804 B 1 
HETATM 9 C C20 CPL . . . Q 2 156.422 135.545 178.292 1 49.22 ? C20 CPL 804 B 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    54 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           9 
#