data_6WEP # _model_server_result.job_id cCxRWKmwCVAmOoVtW6Tr0Q _model_server_result.datetime_utc '2024-10-19 11:49:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6WEP # _exptl.entry_id 6WEP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WEP _cell.length_a 76.822 _cell.length_b 118.114 _cell.length_c 153.048 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WEP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 294 n n PA O2A NDP sing 295 n n PA O5B NDP sing 296 n n PA O3 NDP sing 297 n n O2A HOA2 NDP sing 298 n n O5B C5B NDP sing 299 n n C5B C4B NDP sing 300 n n C5B H51A NDP sing 301 n n C5B H52A NDP sing 302 n n C4B O4B NDP sing 303 n n C4B C3B NDP sing 304 n n C4B H4B NDP sing 305 n n O4B C1B NDP sing 306 n n C3B O3B NDP sing 307 n n C3B C2B NDP sing 308 n n C3B H3B NDP sing 309 n n O3B HO3A NDP sing 310 n n C2B O2B NDP sing 311 n n C2B C1B NDP sing 312 n n C2B H2B NDP sing 313 n n O2B P2B NDP sing 314 n n C1B N9A NDP sing 315 n n C1B H1B NDP sing 316 n n N9A C8A NDP sing 317 n y N9A C4A NDP sing 318 n y C8A N7A NDP doub 319 n y C8A H8A NDP sing 320 n n N7A C5A NDP sing 321 n y C5A C6A NDP sing 322 n y C5A C4A NDP doub 323 n y C6A N6A NDP sing 324 n n C6A N1A NDP doub 325 n y N6A H61A NDP sing 326 n n N6A H62A NDP sing 327 n n N1A C2A NDP sing 328 n y C2A N3A NDP doub 329 n y C2A H2A NDP sing 330 n n N3A C4A NDP sing 331 n y O3 PN NDP sing 332 n n PN O1N NDP doub 333 n n PN O2N NDP sing 334 n n PN O5D NDP sing 335 n n O2N H21N NDP sing 336 n n O5D C5D NDP sing 337 n n C5D C4D NDP sing 338 n n C5D H51N NDP sing 339 n n C5D H52N NDP sing 340 n n C4D O4D NDP sing 341 n n C4D C3D NDP sing 342 n n C4D H4D NDP sing 343 n n O4D C1D NDP sing 344 n n C3D O3D NDP sing 345 n n C3D C2D NDP sing 346 n n C3D H3D NDP sing 347 n n O3D HO3N NDP sing 348 n n C2D O2D NDP sing 349 n n C2D C1D NDP sing 350 n n C2D H2D NDP sing 351 n n O2D HO2N NDP sing 352 n n C1D N1N NDP sing 353 n n C1D H1D NDP sing 354 n n N1N C2N NDP sing 355 n n N1N C6N NDP sing 356 n n C2N C3N NDP doub 357 n n C2N H2N NDP sing 358 n n C3N C7N NDP sing 359 n n C3N C4N NDP sing 360 n n C7N O7N NDP doub 361 n n C7N N7N NDP sing 362 n n N7N H71N NDP sing 363 n n N7N H72N NDP sing 364 n n C4N C5N NDP sing 365 n n C4N H41N NDP sing 366 n n C4N H42N NDP sing 367 n n C5N C6N NDP doub 368 n n C5N H5N NDP sing 369 n n C6N H6N NDP sing 370 n n P2B O1X NDP doub 371 n n P2B O2X NDP sing 372 n n P2B O3X NDP sing 373 n n O2X HOP2 NDP sing 374 n n O3X HOP3 NDP sing 375 n n # _atom_sites.entry_id 6WEP _atom_sites.fract_transf_matrix[1][1] 0.013017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006534 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 601 601 NDP NDP . D 3 MTX A 1 602 602 MTX MTX . E 2 NDP B 1 601 601 NDP NDP . F 3 MTX B 1 602 602 MTX MTX . G 4 HOH A 1 701 13 HOH HOH . G 4 HOH A 2 702 4 HOH HOH . G 4 HOH A 3 703 2 HOH HOH . G 4 HOH A 4 704 16 HOH HOH . G 4 HOH A 5 705 7 HOH HOH . G 4 HOH A 6 706 17 HOH HOH . G 4 HOH A 7 707 10 HOH HOH . G 4 HOH A 8 708 1 HOH HOH . G 4 HOH A 9 709 14 HOH HOH . H 4 HOH B 1 701 12 HOH HOH . H 4 HOH B 2 702 5 HOH HOH . H 4 HOH B 3 703 3 HOH HOH . H 4 HOH B 4 704 6 HOH HOH . H 4 HOH B 5 705 9 HOH HOH . H 4 HOH B 6 706 11 HOH HOH . H 4 HOH B 7 707 15 HOH HOH . H 4 HOH B 8 708 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 27.059 -24.712 15.824 1 61.77 ? PA NDP 601 A 1 HETATM 2 O O1A NDP . . . C 2 27.292 -24.869 17.312 1 62.31 ? O1A NDP 601 A 1 HETATM 3 O O2A NDP . . . C 2 26.36 -23.408 15.561 1 54.13 ? O2A NDP 601 A 1 HETATM 4 O O5B NDP . . . C 2 28.391 -24.69 15.065 1 65.76 ? O5B NDP 601 A 1 HETATM 5 C C5B NDP . . . C 2 29.215 -25.823 14.999 1 66.07 ? C5B NDP 601 A 1 HETATM 6 C C4B NDP . . . C 2 30.41 -25.704 14.145 1 67.81 ? C4B NDP 601 A 1 HETATM 7 O O4B NDP . . . C 2 31.264 -24.703 14.66 1 67.24 ? O4B NDP 601 A 1 HETATM 8 C C3B NDP . . . C 2 31.222 -26.925 14.103 1 64.95 ? C3B NDP 601 A 1 HETATM 9 O O3B NDP . . . C 2 30.808 -27.789 13.105 1 70.12 ? O3B NDP 601 A 1 HETATM 10 C C2B NDP . . . C 2 32.533 -26.402 13.818 1 66.04 ? C2B NDP 601 A 1 HETATM 11 O O2B NDP . . . C 2 32.596 -25.999 12.479 1 73.23 ? O2B NDP 601 A 1 HETATM 12 C C1B NDP . . . C 2 32.585 -25.213 14.647 1 67.86 ? C1B NDP 601 A 1 HETATM 13 N N9A NDP . . . C 2 33.026 -25.502 15.971 1 77.87 ? N9A NDP 601 A 1 HETATM 14 C C8A NDP . . . C 2 32.241 -25.768 17.048 1 75.29 ? C8A NDP 601 A 1 HETATM 15 N N7A NDP . . . C 2 33.013 -25.984 18.128 1 72.97 ? N7A NDP 601 A 1 HETATM 16 C C5A NDP . . . C 2 34.327 -25.847 17.749 1 73.49 ? C5A NDP 601 A 1 HETATM 17 C C6A NDP . . . C 2 35.568 -25.951 18.423 1 79.49 ? C6A NDP 601 A 1 HETATM 18 N N6A NDP . . . C 2 35.591 -26.278 19.871 1 78.91 ? N6A NDP 601 A 1 HETATM 19 N N1A NDP . . . C 2 36.732 -25.754 17.746 1 83.15 ? N1A NDP 601 A 1 HETATM 20 C C2A NDP . . . C 2 36.685 -25.456 16.419 1 80 ? C2A NDP 601 A 1 HETATM 21 N N3A NDP . . . C 2 35.54 -25.346 15.739 1 71.22 ? N3A NDP 601 A 1 HETATM 22 C C4A NDP . . . C 2 34.332 -25.539 16.385 1 74.54 ? C4A NDP 601 A 1 HETATM 23 O O3 NDP . . . C 2 26.159 -25.899 15.254 1 70.76 ? O3 NDP 601 A 1 HETATM 24 P PN NDP . . . C 2 24.698 -26.227 15.798 1 61.36 ? PN NDP 601 A 1 HETATM 25 O O1N NDP . . . C 2 24.076 -27.351 14.959 1 61.2 ? O1N NDP 601 A 1 HETATM 26 O O2N NDP . . . C 2 24.792 -26.67 17.243 1 61.38 ? O2N NDP 601 A 1 HETATM 27 O O5D NDP . . . C 2 23.757 -24.915 15.661 1 61.96 ? O5D NDP 601 A 1 HETATM 28 C C5D NDP . . . C 2 22.976 -24.73 14.507 1 56.63 ? C5D NDP 601 A 1 HETATM 29 C C4D NDP . . . C 2 21.531 -24.78 14.662 1 54.51 ? C4D NDP 601 A 1 HETATM 30 O O4D NDP . . . C 2 21.15 -24.062 15.834 1 56.22 ? O4D NDP 601 A 1 HETATM 31 C C3D NDP . . . C 2 20.845 -24.143 13.531 1 60.3 ? C3D NDP 601 A 1 HETATM 32 O O3D NDP . . . C 2 19.726 -24.894 13.185 1 59.44 ? O3D NDP 601 A 1 HETATM 33 C C2D NDP . . . C 2 20.433 -22.868 14.02 1 60.8 ? C2D NDP 601 A 1 HETATM 34 O O2D NDP . . . C 2 19.263 -22.448 13.384 1 54.45 ? O2D NDP 601 A 1 HETATM 35 C C1D NDP . . . C 2 20.207 -23.119 15.457 1 56.81 ? C1D NDP 601 A 1 HETATM 36 N N1N NDP . . . C 2 20.359 -21.915 16.213 1 57.28 ? N1N NDP 601 A 1 HETATM 37 C C2N NDP . . . C 2 19.344 -21.53 17.002 1 56.59 ? C2N NDP 601 A 1 HETATM 38 C C3N NDP . . . C 2 19.432 -20.36 17.768 1 51.86 ? C3N NDP 601 A 1 HETATM 39 C C7N NDP . . . C 2 18.255 -19.974 18.648 1 52.08 ? C7N NDP 601 A 1 HETATM 40 O O7N NDP . . . C 2 18.368 -19.015 19.427 1 51.09 ? O7N NDP 601 A 1 HETATM 41 N N7N NDP . . . C 2 17.018 -20.705 18.604 1 49.68 ? N7N NDP 601 A 1 HETATM 42 C C4N NDP . . . C 2 20.601 -19.58 17.717 1 52.03 ? C4N NDP 601 A 1 HETATM 43 C C5N NDP . . . C 2 21.641 -20.012 16.883 1 60.68 ? C5N NDP 601 A 1 HETATM 44 C C6N NDP . . . C 2 21.511 -21.181 16.136 1 62.99 ? C6N NDP 601 A 1 HETATM 45 P P2B NDP . . . C 2 33.653 -26.578 11.489 1 66.12 ? P2B NDP 601 A 1 HETATM 46 O O1X NDP . . . C 2 32.969 -27.644 10.616 1 72.93 ? O1X NDP 601 A 1 HETATM 47 O O2X NDP . . . C 2 34.158 -25.495 10.628 1 64.96 ? O2X NDP 601 A 1 HETATM 48 O O3X NDP . . . C 2 34.803 -27.18 12.232 1 77.51 ? O3X NDP 601 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #