data_6WFH # _model_server_result.job_id ND99cTEmHg-SABoXxIxFSw _model_server_result.datetime_utc '2024-12-02 21:12:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wfh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6WFH # _exptl.entry_id 6WFH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WFH _cell.length_a 68.302 _cell.length_b 68.302 _cell.length_c 103.462 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WFH _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 B CO CO . A CO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc2 A OE1 GLN 60 A GLN 60 1_555 B CO CO . A CO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc3 A NE2 HIS 84 A HIS 84 1_555 B CO CO . A CO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc4 A OE2 GLU 134 A GLU 134 1_555 B CO CO . A CO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc5 B CO CO . A CO 201 1_555 C OS1 V0V . A V0V 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc6 B CO CO . A CO 201 1_555 C OS5 V0V . A V0V 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 6WFH _atom_sites.fract_transf_matrix[1][1] 0.014641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009665 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 201 150 CO CO . C 3 V0V A 1 202 151 V0V Y69 . D 4 SO4 A 1 203 200 SO4 SO4 . E 5 PEG A 1 204 201 PEG PEG . F 5 PEG A 1 205 202 PEG PEG . G 6 CL A 1 206 203 CL CL . H 7 HOH A 1 301 236 HOH HOH . H 7 HOH A 2 302 264 HOH HOH . H 7 HOH A 3 303 247 HOH HOH . H 7 HOH A 4 304 255 HOH HOH . H 7 HOH A 5 305 233 HOH HOH . H 7 HOH A 6 306 230 HOH HOH . H 7 HOH A 7 307 237 HOH HOH . H 7 HOH A 8 308 263 HOH HOH . H 7 HOH A 9 309 228 HOH HOH . H 7 HOH A 10 310 216 HOH HOH . H 7 HOH A 11 311 204 HOH HOH . H 7 HOH A 12 312 316 HOH HOH . H 7 HOH A 13 313 317 HOH HOH . H 7 HOH A 14 314 272 HOH HOH . H 7 HOH A 15 315 270 HOH HOH . H 7 HOH A 16 316 231 HOH HOH . H 7 HOH A 17 317 277 HOH HOH . H 7 HOH A 18 318 294 HOH HOH . H 7 HOH A 19 319 271 HOH HOH . H 7 HOH A 20 320 244 HOH HOH . H 7 HOH A 21 321 288 HOH HOH . H 7 HOH A 22 322 293 HOH HOH . H 7 HOH A 23 323 295 HOH HOH . H 7 HOH A 24 324 300 HOH HOH . H 7 HOH A 25 325 308 HOH HOH . H 7 HOH A 26 326 278 HOH HOH . H 7 HOH A 27 327 268 HOH HOH . H 7 HOH A 28 328 287 HOH HOH . H 7 HOH A 29 329 299 HOH HOH . H 7 HOH A 30 330 296 HOH HOH . H 7 HOH A 31 331 302 HOH HOH . H 7 HOH A 32 332 276 HOH HOH . H 7 HOH A 33 333 205 HOH HOH . H 7 HOH A 34 334 212 HOH HOH . H 7 HOH A 35 335 223 HOH HOH . H 7 HOH A 36 336 310 HOH HOH . H 7 HOH A 37 337 289 HOH HOH . H 7 HOH A 38 338 207 HOH HOH . H 7 HOH A 39 339 211 HOH HOH . H 7 HOH A 40 340 269 HOH HOH . H 7 HOH A 41 341 215 HOH HOH . H 7 HOH A 42 342 284 HOH HOH . H 7 HOH A 43 343 206 HOH HOH . H 7 HOH A 44 344 291 HOH HOH . H 7 HOH A 45 345 219 HOH HOH . H 7 HOH A 46 346 297 HOH HOH . H 7 HOH A 47 347 234 HOH HOH . H 7 HOH A 48 348 261 HOH HOH . H 7 HOH A 49 349 210 HOH HOH . H 7 HOH A 50 350 282 HOH HOH . H 7 HOH A 51 351 274 HOH HOH . H 7 HOH A 52 352 251 HOH HOH . H 7 HOH A 53 353 225 HOH HOH . H 7 HOH A 54 354 281 HOH HOH . H 7 HOH A 55 355 232 HOH HOH . H 7 HOH A 56 356 226 HOH HOH . H 7 HOH A 57 357 309 HOH HOH . H 7 HOH A 58 358 301 HOH HOH . H 7 HOH A 59 359 279 HOH HOH . H 7 HOH A 60 360 217 HOH HOH . H 7 HOH A 61 361 227 HOH HOH . H 7 HOH A 62 362 314 HOH HOH . H 7 HOH A 63 363 253 HOH HOH . H 7 HOH A 64 364 213 HOH HOH . H 7 HOH A 65 365 218 HOH HOH . H 7 HOH A 66 366 292 HOH HOH . H 7 HOH A 67 367 275 HOH HOH . H 7 HOH A 68 368 285 HOH HOH . H 7 HOH A 69 369 220 HOH HOH . H 7 HOH A 70 370 214 HOH HOH . H 7 HOH A 71 371 240 HOH HOH . H 7 HOH A 72 372 229 HOH HOH . H 7 HOH A 73 373 266 HOH HOH . H 7 HOH A 74 374 311 HOH HOH . H 7 HOH A 75 375 267 HOH HOH . H 7 HOH A 76 376 306 HOH HOH . H 7 HOH A 77 377 286 HOH HOH . H 7 HOH A 78 378 245 HOH HOH . H 7 HOH A 79 379 313 HOH HOH . H 7 HOH A 80 380 222 HOH HOH . H 7 HOH A 81 381 221 HOH HOH . H 7 HOH A 82 382 283 HOH HOH . H 7 HOH A 83 383 246 HOH HOH . H 7 HOH A 84 384 224 HOH HOH . H 7 HOH A 85 385 248 HOH HOH . H 7 HOH A 86 386 249 HOH HOH . H 7 HOH A 87 387 257 HOH HOH . H 7 HOH A 88 388 280 HOH HOH . H 7 HOH A 89 389 239 HOH HOH . H 7 HOH A 90 390 235 HOH HOH . H 7 HOH A 91 391 208 HOH HOH . H 7 HOH A 92 392 259 HOH HOH . H 7 HOH A 93 393 273 HOH HOH . H 7 HOH A 94 394 243 HOH HOH . H 7 HOH A 95 395 262 HOH HOH . H 7 HOH A 96 396 312 HOH HOH . H 7 HOH A 97 397 319 HOH HOH . H 7 HOH A 98 398 238 HOH HOH . H 7 HOH A 99 399 241 HOH HOH . H 7 HOH A 100 400 242 HOH HOH . H 7 HOH A 101 401 260 HOH HOH . H 7 HOH A 102 402 252 HOH HOH . H 7 HOH A 103 403 250 HOH HOH . H 7 HOH A 104 404 254 HOH HOH . H 7 HOH A 105 405 256 HOH HOH . H 7 HOH A 106 406 315 HOH HOH . H 7 HOH A 107 407 290 HOH HOH . H 7 HOH A 108 408 303 HOH HOH . H 7 HOH A 109 409 307 HOH HOH . H 7 HOH A 110 410 305 HOH HOH . H 7 HOH A 111 411 318 HOH HOH . H 7 HOH A 112 412 304 HOH HOH . H 7 HOH A 113 413 320 HOH HOH . H 7 HOH A 114 414 298 HOH HOH . H 7 HOH A 115 415 258 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 5 29.025 13.196 19.341 1 75.46 ? C1 PEG 204 A 1 HETATM 2 O O1 PEG . . . E 5 28.826 11.881 19.858 1 74.29 ? O1 PEG 204 A 1 HETATM 3 C C2 PEG . . . E 5 27.913 13.635 18.416 1 75.26 ? C2 PEG 204 A 1 HETATM 4 O O2 PEG . . . E 5 26.83 14.177 19.172 1 71.56 ? O2 PEG 204 A 1 HETATM 5 C C3 PEG . . . E 5 26.089 15.198 18.501 1 65.88 ? C3 PEG 204 A 1 HETATM 6 C C4 PEG . . . E 5 24.801 15.444 19.247 1 64.05 ? C4 PEG 204 A 1 HETATM 7 O O4 PEG . . . E 5 24.811 16.633 20.023 1 66.75 ? O4 PEG 204 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #