data_6WFO # _model_server_result.job_id 51nIMl6dkrI41DOes59tEA _model_server_result.datetime_utc '2024-12-01 10:24:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wfo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":201}' # _entry.id 6WFO # _exptl.entry_id 6WFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.08 _cell.angle_gamma 90 _cell.entry_id 6WFO _cell.length_a 47.87 _cell.length_b 102.63 _cell.length_c 67.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,J 1 1 B,F,G,K 2 1 C,H,I,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 6WFO _atom_sites.fract_transf_matrix[1][1] 0.02089 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006022 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ACO A 1 201 201 ACO ACO . E 3 U3Y A 1 202 301 U3Y UNL . F 2 ACO B 1 201 201 ACO ACO . G 3 U3Y B 1 202 301 U3Y UNL . H 2 ACO C 1 201 201 ACO ACO . I 3 U3Y C 1 202 301 U3Y UNL . J 4 HOH A 1 301 4 HOH HOH . J 4 HOH A 2 302 80 HOH HOH . J 4 HOH A 3 303 18 HOH HOH . J 4 HOH A 4 304 70 HOH HOH . J 4 HOH A 5 305 17 HOH HOH . J 4 HOH A 6 306 5 HOH HOH . J 4 HOH A 7 307 19 HOH HOH . J 4 HOH A 8 308 23 HOH HOH . J 4 HOH A 9 309 26 HOH HOH . J 4 HOH A 10 310 22 HOH HOH . J 4 HOH A 11 311 55 HOH HOH . J 4 HOH A 12 312 73 HOH HOH . J 4 HOH A 13 313 24 HOH HOH . J 4 HOH A 14 314 64 HOH HOH . J 4 HOH A 15 315 14 HOH HOH . J 4 HOH A 16 316 69 HOH HOH . J 4 HOH A 17 317 29 HOH HOH . J 4 HOH A 18 318 66 HOH HOH . J 4 HOH A 19 319 28 HOH HOH . J 4 HOH A 20 320 1 HOH HOH . J 4 HOH A 21 321 72 HOH HOH . J 4 HOH A 22 322 31 HOH HOH . J 4 HOH A 23 323 79 HOH HOH . J 4 HOH A 24 324 27 HOH HOH . J 4 HOH A 25 325 30 HOH HOH . J 4 HOH A 26 326 25 HOH HOH . J 4 HOH A 27 327 77 HOH HOH . K 4 HOH B 1 301 37 HOH HOH . K 4 HOH B 2 302 49 HOH HOH . K 4 HOH B 3 303 32 HOH HOH . K 4 HOH B 4 304 63 HOH HOH . K 4 HOH B 5 305 53 HOH HOH . K 4 HOH B 6 306 36 HOH HOH . K 4 HOH B 7 307 3 HOH HOH . K 4 HOH B 8 308 35 HOH HOH . K 4 HOH B 9 309 75 HOH HOH . K 4 HOH B 10 310 51 HOH HOH . K 4 HOH B 11 311 57 HOH HOH . K 4 HOH B 12 312 11 HOH HOH . K 4 HOH B 13 313 68 HOH HOH . K 4 HOH B 14 314 38 HOH HOH . K 4 HOH B 15 315 54 HOH HOH . K 4 HOH B 16 316 8 HOH HOH . K 4 HOH B 17 317 12 HOH HOH . K 4 HOH B 18 318 65 HOH HOH . K 4 HOH B 19 319 61 HOH HOH . K 4 HOH B 20 320 13 HOH HOH . K 4 HOH B 21 321 74 HOH HOH . K 4 HOH B 22 322 76 HOH HOH . K 4 HOH B 23 323 10 HOH HOH . K 4 HOH B 24 324 62 HOH HOH . K 4 HOH B 25 325 6 HOH HOH . K 4 HOH B 26 326 39 HOH HOH . K 4 HOH B 27 327 67 HOH HOH . K 4 HOH B 28 328 56 HOH HOH . K 4 HOH B 29 329 40 HOH HOH . K 4 HOH B 30 330 52 HOH HOH . K 4 HOH B 31 331 82 HOH HOH . K 4 HOH B 32 332 33 HOH HOH . K 4 HOH B 33 333 60 HOH HOH . K 4 HOH B 34 334 34 HOH HOH . K 4 HOH B 35 335 81 HOH HOH . K 4 HOH B 36 336 50 HOH HOH . L 4 HOH C 1 301 41 HOH HOH . L 4 HOH C 2 302 58 HOH HOH . L 4 HOH C 3 303 2 HOH HOH . L 4 HOH C 4 304 47 HOH HOH . L 4 HOH C 5 305 15 HOH HOH . L 4 HOH C 6 306 20 HOH HOH . L 4 HOH C 7 307 9 HOH HOH . L 4 HOH C 8 308 21 HOH HOH . L 4 HOH C 9 309 48 HOH HOH . L 4 HOH C 10 310 7 HOH HOH . L 4 HOH C 11 311 46 HOH HOH . L 4 HOH C 12 312 71 HOH HOH . L 4 HOH C 13 313 78 HOH HOH . L 4 HOH C 14 314 59 HOH HOH . L 4 HOH C 15 315 45 HOH HOH . L 4 HOH C 16 316 42 HOH HOH . L 4 HOH C 17 317 44 HOH HOH . L 4 HOH C 18 318 16 HOH HOH . L 4 HOH C 19 319 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . H 2 -2.745 51.778 8.588 1 31.01 ? N1A ACO 201 C 1 HETATM 2 C C2A ACO . . . H 2 -4.055 51.631 8.818 1 33.78 ? C2A ACO 201 C 1 HETATM 3 N N3A ACO . . . H 2 -4.732 51.827 9.955 1 35.38 ? N3A ACO 201 C 1 HETATM 4 C C4A ACO . . . H 2 -3.912 52.213 10.949 1 33.55 ? C4A ACO 201 C 1 HETATM 5 C C5A ACO . . . H 2 -2.538 52.374 10.87 1 30.28 ? C5A ACO 201 C 1 HETATM 6 C C6A ACO . . . H 2 -1.939 52.138 9.614 1 32.04 ? C6A ACO 201 C 1 HETATM 7 N N6A ACO . . . H 2 -0.621 52.195 9.39 1 34.97 ? N6A ACO 201 C 1 HETATM 8 N N7A ACO . . . H 2 -2.015 52.723 12.107 1 30.06 ? N7A ACO 201 C 1 HETATM 9 C C8A ACO . . . H 2 -3.067 52.767 12.889 1 29.59 ? C8A ACO 201 C 1 HETATM 10 N N9A ACO . . . H 2 -4.246 52.471 12.256 1 34.04 ? N9A ACO 201 C 1 HETATM 11 C C1B ACO . . . H 2 -5.584 52.365 12.844 1 33.77 ? C1B ACO 201 C 1 HETATM 12 C C2B ACO . . . H 2 -6.048 50.918 13.026 1 37.74 ? C2B ACO 201 C 1 HETATM 13 O O2B ACO . . . H 2 -7.464 50.78 12.904 1 42.04 ? O2B ACO 201 C 1 HETATM 14 C C3B ACO . . . H 2 -5.539 50.652 14.438 1 36.46 ? C3B ACO 201 C 1 HETATM 15 O O3B ACO . . . H 2 -6.22 49.554 15.073 1 39.04 ? O3B ACO 201 C 1 HETATM 16 P P3B ACO . . . H 2 -5.756 48.051 14.805 1 43.59 ? P3B ACO 201 C 1 HETATM 17 O O7A ACO . . . H 2 -6.516 47.189 15.791 1 44.99 ? O7A ACO 201 C 1 HETATM 18 O O8A ACO . . . H 2 -6.05 47.747 13.313 1 45.55 ? O8A ACO 201 C 1 HETATM 19 O O9A ACO . . . H 2 -4.21 48.011 14.952 1 40.41 ? O9A ACO 201 C 1 HETATM 20 C C4B ACO . . . H 2 -5.84 51.966 15.148 1 34.83 ? C4B ACO 201 C 1 HETATM 21 O O4B ACO . . . H 2 -5.582 52.963 14.133 1 32.9 ? O4B ACO 201 C 1 HETATM 22 C C5B ACO . . . H 2 -5.006 52.25 16.377 1 31.47 ? C5B ACO 201 C 1 HETATM 23 O O5B ACO . . . H 2 -3.598 52.089 16.075 1 26.61 ? O5B ACO 201 C 1 HETATM 24 P P1A ACO . . . H 2 -2.514 52.081 17.231 1 25.06 ? P1A ACO 201 C 1 HETATM 25 O O1A ACO . . . H 2 -1.844 50.778 17.479 1 26.9 ? O1A ACO 201 C 1 HETATM 26 O O2A ACO . . . H 2 -3.059 52.686 18.492 1 23.69 ? O2A ACO 201 C 1 HETATM 27 O O3A ACO . . . H 2 -1.477 53.127 16.641 1 21.77 ? O3A ACO 201 C 1 HETATM 28 P P2A ACO . . . H 2 0.089 53.374 16.656 1 21.3 ? P2A ACO 201 C 1 HETATM 29 O O4A ACO . . . H 2 0.639 53.121 18.014 1 24.91 ? O4A ACO 201 C 1 HETATM 30 O O5A ACO . . . H 2 0.764 52.577 15.575 1 20.9 ? O5A ACO 201 C 1 HETATM 31 O O6A ACO . . . H 2 0.225 54.958 16.365 1 25.19 ? O6A ACO 201 C 1 HETATM 32 C CBP ACO . . . H 2 0.5 56.71 14.713 1 25.99 ? CBP ACO 201 C 1 HETATM 33 C CCP ACO . . . H 2 -0.398 55.581 15.219 1 24.68 ? CCP ACO 201 C 1 HETATM 34 C CDP ACO . . . H 2 0.663 57.729 15.853 1 21.73 ? CDP ACO 201 C 1 HETATM 35 C CEP ACO . . . H 2 -0.181 57.401 13.52 1 25.61 ? CEP ACO 201 C 1 HETATM 36 C CAP ACO . . . H 2 1.86 56.099 14.287 1 26.11 ? CAP ACO 201 C 1 HETATM 37 O OAP ACO . . . H 2 1.721 55.455 13.035 1 24.52 ? OAP ACO 201 C 1 HETATM 38 C C9P ACO . . . H 2 3.059 57.035 14.228 1 27.92 ? C9P ACO 201 C 1 HETATM 39 O O9P ACO . . . H 2 3.651 57.322 15.265 1 25.24 ? O9P ACO 201 C 1 HETATM 40 N N8P ACO . . . H 2 3.382 57.523 13.023 1 28.4 ? N8P ACO 201 C 1 HETATM 41 C C7P ACO . . . H 2 4.488 58.443 12.8 1 28.66 ? C7P ACO 201 C 1 HETATM 42 C C6P ACO . . . H 2 4.258 59.778 13.472 1 30.75 ? C6P ACO 201 C 1 HETATM 43 C C5P ACO . . . H 2 3.062 60.471 12.886 1 34.42 ? C5P ACO 201 C 1 HETATM 44 O O5P ACO . . . H 2 2.941 60.597 11.668 1 37.6 ? O5P ACO 201 C 1 HETATM 45 N N4P ACO . . . H 2 2.149 60.904 13.756 1 30.33 ? N4P ACO 201 C 1 HETATM 46 C C3P ACO . . . H 2 0.941 61.608 13.351 1 29.22 ? C3P ACO 201 C 1 HETATM 47 C C2P ACO . . . H 2 1.26 62.985 12.792 1 35.83 ? C2P ACO 201 C 1 HETATM 48 S S1P ACO . . . H 2 -0.078 64.108 13.218 1 39.26 ? S1P ACO 201 C 1 HETATM 49 C C ACO . . . H 2 0.339 64.667 14.837 1 36.21 ? C ACO 201 C 1 HETATM 50 O O ACO . . . H 2 1.358 64.357 15.386 1 38.81 ? O ACO 201 C 1 HETATM 51 C CH3 ACO . . . H 2 -0.666 65.627 15.4 1 31.98 ? CH3 ACO 201 C 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 51 #