data_6WFO
#
_model_server_result.job_id            DSHvHkYs7cRjc6JsN9l_CA 
_model_server_result.datetime_utc      '2024-10-19 00:52:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wfo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":202}' 
#
_entry.id    6WFO 
#
_exptl.entry_id    6WFO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              552.566 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-1-methyl-N-{(3S,5R)-5-[4-(methylcarbamoyl)-1,3-thiazol-2-yl]-1-[4-(1H-tetrazol-5-yl)benzene-1-carbonyl]pyrrolidin-3-yl}-2,6-dioxohexahydropyrimidine-4-carboxamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.08 
_cell.angle_gamma         90 
_cell.entry_id            6WFO 
_cell.length_a            47.87 
_cell.length_b            102.63 
_cell.length_c            67.5 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WFO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,J 1 1 
B,F,G,K 2 1 
C,H,I,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
#
_chem_comp.formula           'C23 H24 N10 O5 S' 
_chem_comp.formula_weight    552.566 
_chem_comp.id                U3Y 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-1-methyl-N-{(3S,5R)-5-[4-(methylcarbamoyl)-1,3-thiazol-2-yl]-1-[4-(1H-tetrazol-5-yl)benzene-1-carbonyl]pyrrolidin-3-yl}-2,6-dioxohexahydropyrimidine-4-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C14 U3Y doub 421 n n 
C15 N5 U3Y sing 422 n n 
C14 N5 U3Y sing 423 n n 
C14 N6 U3Y sing 424 n n 
N5 C13 U3Y sing 425 n n 
N6 C11 U3Y sing 426 n n 
C13 O4 U3Y doub 427 n n 
C13 C12 U3Y sing 428 n n 
C12 C11 U3Y sing 429 n n 
C11 C10 U3Y sing 430 n n 
O2 C10 U3Y doub 431 n n 
C10 N4 U3Y sing 432 n n 
N8 N9 U3Y doub 433 n y 
N8 N7 U3Y sing 434 n y 
N9 N10 U3Y sing 435 n y 
N7 C23 U3Y doub 436 n y 
N10 C23 U3Y sing 437 n y 
N4 C3 U3Y sing 438 n n 
C23 C20 U3Y sing 439 n n 
C20 C19 U3Y doub 440 n y 
C20 C21 U3Y sing 441 n y 
C19 C18 U3Y sing 442 n y 
C3 C2 U3Y sing 443 n n 
C3 C4 U3Y sing 444 n n 
C2 N1 U3Y sing 445 n n 
C21 C22 U3Y doub 446 n y 
C18 C17 U3Y doub 447 n y 
C22 C17 U3Y sing 448 n y 
C17 C16 U3Y sing 449 n n 
C4 C1 U3Y sing 450 n n 
N1 C16 U3Y sing 451 n n 
N1 C1 U3Y sing 452 n n 
C16 O5 U3Y doub 453 n n 
C1 C5 U3Y sing 454 n n 
S1 C5 U3Y sing 455 n y 
S1 C7 U3Y sing 456 n y 
C5 N2 U3Y doub 457 n y 
N2 C6 U3Y sing 458 n y 
C7 C6 U3Y doub 459 n y 
C6 C8 U3Y sing 460 n n 
O1 C8 U3Y doub 461 n n 
C8 N3 U3Y sing 462 n n 
N3 C9 U3Y sing 463 n n 
C19 H21 U3Y sing 464 n n 
C21 H22 U3Y sing 465 n n 
C18 H20 U3Y sing 466 n n 
C22 H23 U3Y sing 467 n n 
C7 H7 U3Y sing 468 n n 
C12 H15 U3Y sing 469 n n 
C12 H14 U3Y sing 470 n n 
C4 H5 U3Y sing 471 n n 
C4 H6 U3Y sing 472 n n 
C2 H3 U3Y sing 473 n n 
C2 H2 U3Y sing 474 n n 
C1 H1 U3Y sing 475 n n 
C11 H13 U3Y sing 476 n n 
C3 H4 U3Y sing 477 n n 
C15 H19 U3Y sing 478 n n 
C15 H17 U3Y sing 479 n n 
C15 H18 U3Y sing 480 n n 
C9 H10 U3Y sing 481 n n 
C9 H11 U3Y sing 482 n n 
C9 H9 U3Y sing 483 n n 
N10 H24 U3Y sing 484 n n 
N6 H16 U3Y sing 485 n n 
N3 H8 U3Y sing 486 n n 
N4 H12 U3Y sing 487 n n 
#
_atom_sites.entry_id                     6WFO 
_atom_sites.fract_transf_matrix[1][1]    0.02089 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006022 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009744 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015418 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ACO A 1 201 201 ACO ACO . 
E 3 U3Y A 1 202 301 U3Y UNL . 
F 2 ACO B 1 201 201 ACO ACO . 
G 3 U3Y B 1 202 301 U3Y UNL . 
H 2 ACO C 1 201 201 ACO ACO . 
I 3 U3Y C 1 202 301 U3Y UNL . 
J 4 HOH A 1 301 4 HOH HOH . 
J 4 HOH A 2 302 80 HOH HOH . 
J 4 HOH A 3 303 18 HOH HOH . 
J 4 HOH A 4 304 70 HOH HOH . 
J 4 HOH A 5 305 17 HOH HOH . 
J 4 HOH A 6 306 5 HOH HOH . 
J 4 HOH A 7 307 19 HOH HOH . 
J 4 HOH A 8 308 23 HOH HOH . 
J 4 HOH A 9 309 26 HOH HOH . 
J 4 HOH A 10 310 22 HOH HOH . 
J 4 HOH A 11 311 55 HOH HOH . 
J 4 HOH A 12 312 73 HOH HOH . 
J 4 HOH A 13 313 24 HOH HOH . 
J 4 HOH A 14 314 64 HOH HOH . 
J 4 HOH A 15 315 14 HOH HOH . 
J 4 HOH A 16 316 69 HOH HOH . 
J 4 HOH A 17 317 29 HOH HOH . 
J 4 HOH A 18 318 66 HOH HOH . 
J 4 HOH A 19 319 28 HOH HOH . 
J 4 HOH A 20 320 1 HOH HOH . 
J 4 HOH A 21 321 72 HOH HOH . 
J 4 HOH A 22 322 31 HOH HOH . 
J 4 HOH A 23 323 79 HOH HOH . 
J 4 HOH A 24 324 27 HOH HOH . 
J 4 HOH A 25 325 30 HOH HOH . 
J 4 HOH A 26 326 25 HOH HOH . 
J 4 HOH A 27 327 77 HOH HOH . 
K 4 HOH B 1 301 37 HOH HOH . 
K 4 HOH B 2 302 49 HOH HOH . 
K 4 HOH B 3 303 32 HOH HOH . 
K 4 HOH B 4 304 63 HOH HOH . 
K 4 HOH B 5 305 53 HOH HOH . 
K 4 HOH B 6 306 36 HOH HOH . 
K 4 HOH B 7 307 3 HOH HOH . 
K 4 HOH B 8 308 35 HOH HOH . 
K 4 HOH B 9 309 75 HOH HOH . 
K 4 HOH B 10 310 51 HOH HOH . 
K 4 HOH B 11 311 57 HOH HOH . 
K 4 HOH B 12 312 11 HOH HOH . 
K 4 HOH B 13 313 68 HOH HOH . 
K 4 HOH B 14 314 38 HOH HOH . 
K 4 HOH B 15 315 54 HOH HOH . 
K 4 HOH B 16 316 8 HOH HOH . 
K 4 HOH B 17 317 12 HOH HOH . 
K 4 HOH B 18 318 65 HOH HOH . 
K 4 HOH B 19 319 61 HOH HOH . 
K 4 HOH B 20 320 13 HOH HOH . 
K 4 HOH B 21 321 74 HOH HOH . 
K 4 HOH B 22 322 76 HOH HOH . 
K 4 HOH B 23 323 10 HOH HOH . 
K 4 HOH B 24 324 62 HOH HOH . 
K 4 HOH B 25 325 6 HOH HOH . 
K 4 HOH B 26 326 39 HOH HOH . 
K 4 HOH B 27 327 67 HOH HOH . 
K 4 HOH B 28 328 56 HOH HOH . 
K 4 HOH B 29 329 40 HOH HOH . 
K 4 HOH B 30 330 52 HOH HOH . 
K 4 HOH B 31 331 82 HOH HOH . 
K 4 HOH B 32 332 33 HOH HOH . 
K 4 HOH B 33 333 60 HOH HOH . 
K 4 HOH B 34 334 34 HOH HOH . 
K 4 HOH B 35 335 81 HOH HOH . 
K 4 HOH B 36 336 50 HOH HOH . 
L 4 HOH C 1 301 41 HOH HOH . 
L 4 HOH C 2 302 58 HOH HOH . 
L 4 HOH C 3 303 2 HOH HOH . 
L 4 HOH C 4 304 47 HOH HOH . 
L 4 HOH C 5 305 15 HOH HOH . 
L 4 HOH C 6 306 20 HOH HOH . 
L 4 HOH C 7 307 9 HOH HOH . 
L 4 HOH C 8 308 21 HOH HOH . 
L 4 HOH C 9 309 48 HOH HOH . 
L 4 HOH C 10 310 7 HOH HOH . 
L 4 HOH C 11 311 46 HOH HOH . 
L 4 HOH C 12 312 71 HOH HOH . 
L 4 HOH C 13 313 78 HOH HOH . 
L 4 HOH C 14 314 59 HOH HOH . 
L 4 HOH C 15 315 45 HOH HOH . 
L 4 HOH C 16 316 42 HOH HOH . 
L 4 HOH C 17 317 44 HOH HOH . 
L 4 HOH C 18 318 16 HOH HOH . 
L 4 HOH C 19 319 43 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C19 U3Y . . . E 3 7.972 -11.695 14.677 1 30.35 ? C19 U3Y 202 A 1 
HETATM 2 C C21 U3Y . . . E 3 6.154 -10.086 14.823 1 30.31 ? C21 U3Y 202 A 1 
HETATM 3 C C18 U3Y . . . E 3 8.789 -10.848 15.436 1 30.33 ? C18 U3Y 202 A 1 
HETATM 4 C C22 U3Y . . . E 3 6.968 -9.228 15.575 1 30.34 ? C22 U3Y 202 A 1 
HETATM 5 C C7 U3Y . . . E 3 13.825 -9.74 19.051 1 30.55 ? C7 U3Y 202 A 1 
HETATM 6 C C20 U3Y . . . E 3 6.651 -11.321 14.375 1 33.84 ? C20 U3Y 202 A 1 
HETATM 7 C C17 U3Y . . . E 3 8.28 -9.617 15.867 1 31.82 ? C17 U3Y 202 A 1 
HETATM 8 C C6 U3Y . . . E 3 13.952 -8.417 19.402 1 38.87 ? C6 U3Y 202 A 1 
HETATM 9 C C23 U3Y . . . E 3 5.8 -12.215 13.558 1 39.21 ? C23 U3Y 202 A 1 
HETATM 10 C C5 U3Y . . . E 3 12.312 -8.179 17.921 1 38.09 ? C5 U3Y 202 A 1 
HETATM 11 C C13 U3Y . . . E 3 10.551 -6.549 10.103 1 31.31 ? C13 U3Y 202 A 1 
HETATM 12 C C14 U3Y . . . E 3 12.386 -7.83 8.991 1 29.58 ? C14 U3Y 202 A 1 
HETATM 13 C C16 U3Y . . . E 3 9.112 -8.717 16.667 1 33.77 ? C16 U3Y 202 A 1 
HETATM 14 C C8 U3Y . . . E 3 14.939 -7.944 20.349 1 41.11 ? C8 U3Y 202 A 1 
HETATM 15 C C10 U3Y . . . E 3 12.555 -7.613 12.302 1 30.24 ? C10 U3Y 202 A 1 
HETATM 16 C C12 U3Y . . . E 3 11.669 -5.805 10.817 1 30.04 ? C12 U3Y 202 A 1 
HETATM 17 C C4 U3Y . . . E 3 12.027 -6.731 15.906 1 30.04 ? C4 U3Y 202 A 1 
HETATM 18 C C2 U3Y . . . E 3 10.757 -8.358 14.761 1 29.98 ? C2 U3Y 202 A 1 
HETATM 19 C C1 U3Y . . . E 3 11.286 -7.528 16.994 1 30.4 ? C1 U3Y 202 A 1 
HETATM 20 C C11 U3Y . . . E 3 12.859 -6.677 11.16 1 30.32 ? C11 U3Y 202 A 1 
HETATM 21 C C3 U3Y . . . E 3 12.148 -7.713 14.739 1 30.35 ? C3 U3Y 202 A 1 
HETATM 22 C C15 U3Y . . . E 3 10.061 -8.475 8.604 1 29.78 ? C15 U3Y 202 A 1 
HETATM 23 C C9 U3Y . . . E 3 14.088 -7.984 22.553 0 29.77 ? C9 U3Y 202 A 1 
HETATM 24 N N10 U3Y . . . E 3 6.184 -13.437 13.134 1 40.05 ? N10 U3Y 202 A 1 
HETATM 25 N N2 U3Y . . . E 3 13.091 -7.539 18.764 1 40.27 ? N2 U3Y 202 A 1 
HETATM 26 N N7 U3Y . . . E 3 4.58 -11.87 13.094 1 41.06 ? N7 U3Y 202 A 1 
HETATM 27 N N9 U3Y . . . E 3 5.153 -13.861 12.362 1 39.53 ? N9 U3Y 202 A 1 
HETATM 28 N N8 U3Y . . . E 3 4.176 -12.928 12.341 1 39.26 ? N8 U3Y 202 A 1 
HETATM 29 N N6 U3Y . . . E 3 13.247 -7.475 10.019 1 30.26 ? N6 U3Y 202 A 1 
HETATM 30 N N5 U3Y . . . E 3 11.016 -7.633 9.304 1 32.34 ? N5 U3Y 202 A 1 
HETATM 31 N N1 U3Y . . . E 3 10.394 -8.414 16.189 1 31.73 ? N1 U3Y 202 A 1 
HETATM 32 N N3 U3Y . . . E 3 14.35 -7.253 21.353 0 30.6 ? N3 U3Y 202 A 1 
HETATM 33 N N4 U3Y . . . E 3 12.5 -6.988 13.523 1 30.27 ? N4 U3Y 202 A 1 
HETATM 34 O O4 U3Y . . . E 3 9.388 -6.191 10.22 1 30.09 ? O4 U3Y 202 A 1 
HETATM 35 O O3 U3Y . . . E 3 12.767 -8.294 7.931 1 29.61 ? O3 U3Y 202 A 1 
HETATM 36 O O5 U3Y . . . E 3 8.603 -8.321 17.708 1 35.43 ? O5 U3Y 202 A 1 
HETATM 37 O O1 U3Y . . . E 3 16.151 -8.15 20.238 1 46.28 ? O1 U3Y 202 A 1 
HETATM 38 O O2 U3Y . . . E 3 12.382 -8.81 12.156 1 30.89 ? O2 U3Y 202 A 1 
HETATM 39 S S1 U3Y . . . E 3 12.568 -9.864 17.888 1 43.58 ? S1 U3Y 202 A 1 
HETATM 40 H H21 U3Y . . . E 3 8.37 -12.644 14.337 1 30 ? H21 U3Y 202 A 1 
HETATM 41 H H22 U3Y . . . E 3 5.139 -9.785 14.593 1 30 ? H22 U3Y 202 A 1 
HETATM 42 H H20 U3Y . . . E 3 9.806 -11.135 15.676 1 30 ? H20 U3Y 202 A 1 
HETATM 43 H H23 U3Y . . . E 3 6.584 -8.275 15.923 1 30 ? H23 U3Y 202 A 1 
HETATM 44 H H7 U3Y . . . E 3 14.373 -10.593 19.419 1 30 ? H7 U3Y 202 A 1 
HETATM 45 H H15 U3Y . . . E 3 11.264 -5.35 11.718 1 30 ? H15 U3Y 202 A 1 
HETATM 46 H H14 U3Y . . . E 3 11.991 -4.999 10.154 1 30 ? H14 U3Y 202 A 1 
HETATM 47 H H5 U3Y . . . E 3 11.444 -5.853 15.613 1 30 ? H5 U3Y 202 A 1 
HETATM 48 H H6 U3Y . . . E 3 13.015 -6.404 16.242 1 30 ? H6 U3Y 202 A 1 
HETATM 49 H H3 U3Y . . . E 3 10.79 -9.371 14.355 1 30 ? H3 U3Y 202 A 1 
HETATM 50 H H2 U3Y . . . E 3 10.011 -7.765 14.231 1 30 ? H2 U3Y 202 A 1 
HETATM 51 H H1 U3Y . . . E 3 10.662 -6.841 17.572 1 30 ? H1 U3Y 202 A 1 
HETATM 52 H H13 U3Y . . . E 3 13.717 -6.068 11.443 1 30 ? H13 U3Y 202 A 1 
HETATM 53 H H4 U3Y . . . E 3 12.914 -8.466 14.955 1 30 ? H4 U3Y 202 A 1 
HETATM 54 H H19 U3Y . . . E 3 10.457 -9.493 8.551 1 30 ? H19 U3Y 202 A 1 
HETATM 55 H H17 U3Y . . . E 3 9.931 -8.082 7.592 1 30 ? H17 U3Y 202 A 1 
HETATM 56 H H18 U3Y . . . E 3 9.103 -8.484 9.128 1 30 ? H18 U3Y 202 A 1 
HETATM 57 H H10 U3Y . . . E 3 13.557 -7.327 23.247 1 30 ? H10 U3Y 202 A 1 
HETATM 58 H H11 U3Y . . . E 3 15.041 -8.31 22.981 1 30 ? H11 U3Y 202 A 1 
HETATM 59 H H9 U3Y . . . E 3 13.471 -8.851 22.297 1 30 ? H9 U3Y 202 A 1 
HETATM 60 H H16 U3Y . . . E 3 14.23 -7.679 9.899 1 30 ? H16 U3Y 202 A 1 
HETATM 61 H H8 U3Y . . . E 3 13.751 -6.471 21.111 1 30 ? H8 U3Y 202 A 1 
HETATM 62 H H12 U3Y . . . E 3 12.653 -5.986 13.573 1 30 ? H12 U3Y 202 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           62 
#