data_6WFO # _model_server_result.job_id RVHzlp2OYBKTmQf97MNUzw _model_server_result.datetime_utc '2024-11-28 22:38:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wfo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":202}' # _entry.id 6WFO # _exptl.entry_id 6WFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 552.566 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-1-methyl-N-{(3S,5R)-5-[4-(methylcarbamoyl)-1,3-thiazol-2-yl]-1-[4-(1H-tetrazol-5-yl)benzene-1-carbonyl]pyrrolidin-3-yl}-2,6-dioxohexahydropyrimidine-4-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.08 _cell.angle_gamma 90 _cell.entry_id 6WFO _cell.length_a 47.87 _cell.length_b 102.63 _cell.length_c 67.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,J 1 1 B,F,G,K 2 1 C,H,I,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # _chem_comp.formula 'C23 H24 N10 O5 S' _chem_comp.formula_weight 552.566 _chem_comp.id U3Y _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-1-methyl-N-{(3S,5R)-5-[4-(methylcarbamoyl)-1,3-thiazol-2-yl]-1-[4-(1H-tetrazol-5-yl)benzene-1-carbonyl]pyrrolidin-3-yl}-2,6-dioxohexahydropyrimidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C14 U3Y doub 421 n n C15 N5 U3Y sing 422 n n C14 N5 U3Y sing 423 n n C14 N6 U3Y sing 424 n n N5 C13 U3Y sing 425 n n N6 C11 U3Y sing 426 n n C13 O4 U3Y doub 427 n n C13 C12 U3Y sing 428 n n C12 C11 U3Y sing 429 n n C11 C10 U3Y sing 430 n n O2 C10 U3Y doub 431 n n C10 N4 U3Y sing 432 n n N8 N9 U3Y doub 433 n y N8 N7 U3Y sing 434 n y N9 N10 U3Y sing 435 n y N7 C23 U3Y doub 436 n y N10 C23 U3Y sing 437 n y N4 C3 U3Y sing 438 n n C23 C20 U3Y sing 439 n n C20 C19 U3Y doub 440 n y C20 C21 U3Y sing 441 n y C19 C18 U3Y sing 442 n y C3 C2 U3Y sing 443 n n C3 C4 U3Y sing 444 n n C2 N1 U3Y sing 445 n n C21 C22 U3Y doub 446 n y C18 C17 U3Y doub 447 n y C22 C17 U3Y sing 448 n y C17 C16 U3Y sing 449 n n C4 C1 U3Y sing 450 n n N1 C16 U3Y sing 451 n n N1 C1 U3Y sing 452 n n C16 O5 U3Y doub 453 n n C1 C5 U3Y sing 454 n n S1 C5 U3Y sing 455 n y S1 C7 U3Y sing 456 n y C5 N2 U3Y doub 457 n y N2 C6 U3Y sing 458 n y C7 C6 U3Y doub 459 n y C6 C8 U3Y sing 460 n n O1 C8 U3Y doub 461 n n C8 N3 U3Y sing 462 n n N3 C9 U3Y sing 463 n n C19 H21 U3Y sing 464 n n C21 H22 U3Y sing 465 n n C18 H20 U3Y sing 466 n n C22 H23 U3Y sing 467 n n C7 H7 U3Y sing 468 n n C12 H15 U3Y sing 469 n n C12 H14 U3Y sing 470 n n C4 H5 U3Y sing 471 n n C4 H6 U3Y sing 472 n n C2 H3 U3Y sing 473 n n C2 H2 U3Y sing 474 n n C1 H1 U3Y sing 475 n n C11 H13 U3Y sing 476 n n C3 H4 U3Y sing 477 n n C15 H19 U3Y sing 478 n n C15 H17 U3Y sing 479 n n C15 H18 U3Y sing 480 n n C9 H10 U3Y sing 481 n n C9 H11 U3Y sing 482 n n C9 H9 U3Y sing 483 n n N10 H24 U3Y sing 484 n n N6 H16 U3Y sing 485 n n N3 H8 U3Y sing 486 n n N4 H12 U3Y sing 487 n n # _atom_sites.entry_id 6WFO _atom_sites.fract_transf_matrix[1][1] 0.02089 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006022 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ACO A 1 201 201 ACO ACO . E 3 U3Y A 1 202 301 U3Y UNL . F 2 ACO B 1 201 201 ACO ACO . G 3 U3Y B 1 202 301 U3Y UNL . H 2 ACO C 1 201 201 ACO ACO . I 3 U3Y C 1 202 301 U3Y UNL . J 4 HOH A 1 301 4 HOH HOH . J 4 HOH A 2 302 80 HOH HOH . J 4 HOH A 3 303 18 HOH HOH . J 4 HOH A 4 304 70 HOH HOH . J 4 HOH A 5 305 17 HOH HOH . J 4 HOH A 6 306 5 HOH HOH . J 4 HOH A 7 307 19 HOH HOH . J 4 HOH A 8 308 23 HOH HOH . J 4 HOH A 9 309 26 HOH HOH . J 4 HOH A 10 310 22 HOH HOH . J 4 HOH A 11 311 55 HOH HOH . J 4 HOH A 12 312 73 HOH HOH . J 4 HOH A 13 313 24 HOH HOH . J 4 HOH A 14 314 64 HOH HOH . J 4 HOH A 15 315 14 HOH HOH . J 4 HOH A 16 316 69 HOH HOH . J 4 HOH A 17 317 29 HOH HOH . J 4 HOH A 18 318 66 HOH HOH . J 4 HOH A 19 319 28 HOH HOH . J 4 HOH A 20 320 1 HOH HOH . J 4 HOH A 21 321 72 HOH HOH . J 4 HOH A 22 322 31 HOH HOH . J 4 HOH A 23 323 79 HOH HOH . J 4 HOH A 24 324 27 HOH HOH . J 4 HOH A 25 325 30 HOH HOH . J 4 HOH A 26 326 25 HOH HOH . J 4 HOH A 27 327 77 HOH HOH . K 4 HOH B 1 301 37 HOH HOH . K 4 HOH B 2 302 49 HOH HOH . K 4 HOH B 3 303 32 HOH HOH . K 4 HOH B 4 304 63 HOH HOH . K 4 HOH B 5 305 53 HOH HOH . K 4 HOH B 6 306 36 HOH HOH . K 4 HOH B 7 307 3 HOH HOH . K 4 HOH B 8 308 35 HOH HOH . K 4 HOH B 9 309 75 HOH HOH . K 4 HOH B 10 310 51 HOH HOH . K 4 HOH B 11 311 57 HOH HOH . K 4 HOH B 12 312 11 HOH HOH . K 4 HOH B 13 313 68 HOH HOH . K 4 HOH B 14 314 38 HOH HOH . K 4 HOH B 15 315 54 HOH HOH . K 4 HOH B 16 316 8 HOH HOH . K 4 HOH B 17 317 12 HOH HOH . K 4 HOH B 18 318 65 HOH HOH . K 4 HOH B 19 319 61 HOH HOH . K 4 HOH B 20 320 13 HOH HOH . K 4 HOH B 21 321 74 HOH HOH . K 4 HOH B 22 322 76 HOH HOH . K 4 HOH B 23 323 10 HOH HOH . K 4 HOH B 24 324 62 HOH HOH . K 4 HOH B 25 325 6 HOH HOH . K 4 HOH B 26 326 39 HOH HOH . K 4 HOH B 27 327 67 HOH HOH . K 4 HOH B 28 328 56 HOH HOH . K 4 HOH B 29 329 40 HOH HOH . K 4 HOH B 30 330 52 HOH HOH . K 4 HOH B 31 331 82 HOH HOH . K 4 HOH B 32 332 33 HOH HOH . K 4 HOH B 33 333 60 HOH HOH . K 4 HOH B 34 334 34 HOH HOH . K 4 HOH B 35 335 81 HOH HOH . K 4 HOH B 36 336 50 HOH HOH . L 4 HOH C 1 301 41 HOH HOH . L 4 HOH C 2 302 58 HOH HOH . L 4 HOH C 3 303 2 HOH HOH . L 4 HOH C 4 304 47 HOH HOH . L 4 HOH C 5 305 15 HOH HOH . L 4 HOH C 6 306 20 HOH HOH . L 4 HOH C 7 307 9 HOH HOH . L 4 HOH C 8 308 21 HOH HOH . L 4 HOH C 9 309 48 HOH HOH . L 4 HOH C 10 310 7 HOH HOH . L 4 HOH C 11 311 46 HOH HOH . L 4 HOH C 12 312 71 HOH HOH . L 4 HOH C 13 313 78 HOH HOH . L 4 HOH C 14 314 59 HOH HOH . L 4 HOH C 15 315 45 HOH HOH . L 4 HOH C 16 316 42 HOH HOH . L 4 HOH C 17 317 44 HOH HOH . L 4 HOH C 18 318 16 HOH HOH . L 4 HOH C 19 319 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 U3Y . . . I 3 6.278 73.454 10.1 1 30.37 ? C19 U3Y 202 C 1 HETATM 2 C C21 U3Y . . . I 3 8.23 73 11.486 1 30.38 ? C21 U3Y 202 C 1 HETATM 3 C C18 U3Y . . . I 3 5.49 73.584 11.252 1 30.34 ? C18 U3Y 202 C 1 HETATM 4 C C22 U3Y . . . I 3 7.442 73.107 12.639 1 30.32 ? C22 U3Y 202 C 1 HETATM 5 C C7 U3Y . . . I 3 0.625 75.713 13.789 1 30.63 ? C7 U3Y 202 C 1 HETATM 6 C C20 U3Y . . . I 3 7.653 73.169 10.213 1 34.74 ? C20 U3Y 202 C 1 HETATM 7 C C17 U3Y . . . I 3 6.077 73.395 12.509 1 32.42 ? C17 U3Y 202 C 1 HETATM 8 C C6 U3Y . . . I 3 0.232 75.29 15.038 1 36.91 ? C6 U3Y 202 C 1 HETATM 9 C C23 U3Y . . . I 3 8.492 73.007 9.002 1 36.86 ? C23 U3Y 202 C 1 HETATM 10 C C5 U3Y . . . I 3 2.09 74.117 14.868 1 39.36 ? C5 U3Y 202 C 1 HETATM 11 C C13 U3Y . . . I 3 4.446 66.767 12.324 1 30.57 ? C13 U3Y 202 C 1 HETATM 12 C C14 U3Y . . . I 3 2.496 66.493 10.773 1 31.9 ? C14 U3Y 202 C 1 HETATM 13 C C16 U3Y . . . I 3 5.296 73.54 13.741 1 36.66 ? C16 U3Y 202 C 1 HETATM 14 C C8 U3Y . . . I 3 -0.998 75.797 15.609 1 38.4 ? C8 U3Y 202 C 1 HETATM 15 C C10 U3Y . . . I 3 2.193 69.007 12.831 1 33.22 ? C10 U3Y 202 C 1 HETATM 16 C C12 U3Y . . . I 3 3.417 66.841 13.449 1 30.02 ? C12 U3Y 202 C 1 HETATM 17 C C4 U3Y . . . I 3 2.734 71.716 15.383 1 30.04 ? C4 U3Y 202 C 1 HETATM 18 C C2 U3Y . . . I 3 3.656 71.707 13.176 1 30.07 ? C2 U3Y 202 C 1 HETATM 19 C C1 U3Y . . . I 3 3.241 73.144 15.088 1 30.45 ? C1 U3Y 202 C 1 HETATM 20 C C11 U3Y . . . I 3 2.109 67.499 13.043 1 30.32 ? C11 U3Y 202 C 1 HETATM 21 C C3 U3Y . . . I 3 2.484 71.149 13.983 1 30.32 ? C3 U3Y 202 C 1 HETATM 22 C C15 U3Y . . . I 3 4.776 66.526 9.884 1 29.74 ? C15 U3Y 202 C 1 HETATM 23 C C9 U3Y . . . I 3 -2.274 76.116 17.663 1 29.8 ? C9 U3Y 202 C 1 HETATM 24 N N10 U3Y . . . I 3 8.044 73.208 7.747 1 39.25 ? N10 U3Y 202 C 1 HETATM 25 N N2 U3Y . . . I 3 1.07 74.374 15.662 1 38.17 ? N2 U3Y 202 C 1 HETATM 26 N N7 U3Y . . . I 3 9.775 72.585 9.023 1 36.51 ? N7 U3Y 202 C 1 HETATM 27 N N9 U3Y . . . I 3 9.102 72.893 6.95 1 38.74 ? N9 U3Y 202 C 1 HETATM 28 N N8 U3Y . . . I 3 10.158 72.521 7.719 1 37.46 ? N8 U3Y 202 C 1 HETATM 29 N N6 U3Y . . . I 3 1.661 66.933 11.793 1 30.24 ? N6 U3Y 202 C 1 HETATM 30 N N5 U3Y . . . I 3 3.889 66.672 11.02 1 30.45 ? N5 U3Y 202 C 1 HETATM 31 N N1 U3Y . . . I 3 4.057 72.95 13.854 1 33.43 ? N1 U3Y 202 C 1 HETATM 32 N N3 U3Y . . . I 3 -1.032 75.766 16.993 1 30.54 ? N3 U3Y 202 C 1 HETATM 33 N N4 U3Y . . . I 3 2.428 69.7 13.997 1 30.42 ? N4 U3Y 202 C 1 HETATM 34 O O4 U3Y . . . I 3 5.646 66.776 12.558 1 30.53 ? O4 U3Y 202 C 1 HETATM 35 O O3 U3Y . . . I 3 2.051 65.997 9.745 1 33.63 ? O3 U3Y 202 C 1 HETATM 36 O O5 U3Y . . . I 3 5.797 74.212 14.625 1 44.03 ? O5 U3Y 202 C 1 HETATM 37 O O1 U3Y . . . I 3 -1.913 76.215 14.896 1 41.18 ? O1 U3Y 202 C 1 HETATM 38 O O2 U3Y . . . I 3 2.067 69.575 11.75 1 33.29 ? O2 U3Y 202 C 1 HETATM 39 S S1 U3Y . . . I 3 2.106 74.95 13.371 1 45.98 ? S1 U3Y 202 C 1 HETATM 40 H H21 U3Y . . . I 3 5.823 73.585 9.126 1 30 ? H21 U3Y 202 C 1 HETATM 41 H H22 U3Y . . . I 3 9.285 72.773 11.587 1 30 ? H22 U3Y 202 C 1 HETATM 42 H H20 U3Y . . . I 3 4.435 73.815 11.169 1 30 ? H20 U3Y 202 C 1 HETATM 43 H H23 U3Y . . . I 3 7.892 72.976 13.616 1 30 ? H23 U3Y 202 C 1 HETATM 44 H H7 U3Y . . . I 3 0.139 76.426 13.14 1 30 ? H7 U3Y 202 C 1 HETATM 45 H H15 U3Y . . . I 3 3.858 67.361 14.297 1 30 ? H15 U3Y 202 C 1 HETATM 46 H H14 U3Y . . . I 3 3.217 65.814 13.766 1 30 ? H14 U3Y 202 C 1 HETATM 47 H H5 U3Y . . . I 3 3.482 71.133 15.92 1 30 ? H5 U3Y 202 C 1 HETATM 48 H H6 U3Y . . . I 3 1.809 71.736 15.965 1 30 ? H6 U3Y 202 C 1 HETATM 49 H H3 U3Y . . . I 3 3.362 71.936 12.149 1 30 ? H3 U3Y 202 C 1 HETATM 50 H H2 U3Y . . . I 3 4.507 71.022 13.175 1 30 ? H2 U3Y 202 C 1 HETATM 51 H H1 U3Y . . . I 3 3.854 73.485 15.929 1 30 ? H1 U3Y 202 C 1 HETATM 52 H H13 U3Y . . . I 3 1.334 67.303 13.785 1 30 ? H13 U3Y 202 C 1 HETATM 53 H H4 U3Y . . . I 3 1.545 71.536 13.577 1 30 ? H4 U3Y 202 C 1 HETATM 54 H H19 U3Y . . . I 3 4.313 66.983 9.004 1 30 ? H19 U3Y 202 C 1 HETATM 55 H H17 U3Y . . . I 3 4.938 65.46 9.701 1 30 ? H17 U3Y 202 C 1 HETATM 56 H H18 U3Y . . . I 3 5.731 67.021 10.077 1 30 ? H18 U3Y 202 C 1 HETATM 57 H H10 U3Y . . . I 3 -2.331 75.586 18.614 1 30 ? H10 U3Y 202 C 1 HETATM 58 H H11 U3Y . . . I 3 -3.132 75.825 17.049 1 30 ? H11 U3Y 202 C 1 HETATM 59 H H9 U3Y . . . I 3 -2.281 77.196 17.823 1 30 ? H9 U3Y 202 C 1 HETATM 60 H H16 U3Y . . . I 3 0.672 66.73 11.705 1 30 ? H16 U3Y 202 C 1 HETATM 61 H H8 U3Y . . . I 3 -0.181 75.645 17.534 1 30 ? H8 U3Y 202 C 1 HETATM 62 H H12 U3Y . . . I 3 2.545 69.202 14.871 1 30 ? H12 U3Y 202 C 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 387 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 62 #