data_6WGO
#
_model_server_result.job_id            Mb4FrfMXf7-HNVuRxWcWzA 
_model_server_result.datetime_utc      '2024-11-01 01:27:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wgo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    6WGO 
#
_exptl.entry_id    6WGO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              444.32 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            {(2R)-1-[(anthracen-9-yl)methyl]-3-methyl-2,3-dihydro-1H-imidazol-2-yl}(dichloro)ruthenium 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WGO 
_cell.length_a            78.305 
_cell.length_b            78.305 
_cell.length_c            38.025 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WGO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc1 A O SER 60 A SER 60 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc2 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
metalc ? metalc3 A OG SER 72 A SER 72 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc4 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc5 A OD2 ASP 119 A ASP 119 1_555 E RU39 U0J . A U0J 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc6 B NA NA . A NA 201 1_555 F O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc7 E RU39 U0J . A U0J 204 1_555 F O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc8 E RU39 U0J . A U0J 204 1_555 F O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
#
_chem_comp.formula           'C19 H16 Cl2 N2 Ru' 
_chem_comp.formula_weight    444.32 
_chem_comp.id                U0J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              {(2R)-1-[(anthracen-9-yl)methyl]-3-methyl-2,3-dihydro-1H-imidazol-2-yl}(dichloro)ruthenium 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C03 U0J doub 364 n n 
C01 N35 U0J sing 365 n n 
C03 N36 U0J sing 366 n n 
C05 N35 U0J sing 367 n n 
C09 C12 U0J sing 368 n n 
C09 N36 U0J sing 369 n n 
C12 C13 U0J doub 370 n y 
C12 C34 U0J sing 371 n y 
C13 C14 U0J sing 372 n y 
C13 C22 U0J sing 373 n y 
C14 C16 U0J doub 374 n y 
C16 C18 U0J sing 375 n y 
C18 C20 U0J doub 376 n y 
C20 C22 U0J sing 377 n y 
C22 C23 U0J doub 378 n y 
C23 C25 U0J sing 379 n y 
C25 C26 U0J doub 380 n y 
C25 C34 U0J sing 381 n y 
C26 C28 U0J sing 382 n y 
C28 C30 U0J doub 383 n y 
C30 C32 U0J sing 384 n y 
C32 C34 U0J doub 385 n y 
N35 C43 U0J sing 386 n n 
N36 C43 U0J sing 387 n n 
RU39 C43 U0J sing 388 n n 
RU39 CL37 U0J sing 389 n n 
RU39 CL38 U0J sing 390 n n 
C01 H1 U0J sing 391 n n 
C03 H2 U0J sing 392 n n 
C05 H3 U0J sing 393 n n 
C05 H4 U0J sing 394 n n 
C05 H5 U0J sing 395 n n 
C09 H6 U0J sing 396 n n 
C09 H7 U0J sing 397 n n 
C14 H8 U0J sing 398 n n 
C16 H9 U0J sing 399 n n 
C18 H10 U0J sing 400 n n 
C20 H11 U0J sing 401 n n 
C23 H12 U0J sing 402 n n 
C26 H13 U0J sing 403 n n 
C28 H14 U0J sing 404 n n 
C30 H15 U0J sing 405 n n 
C32 H16 U0J sing 406 n n 
#
_atom_sites.entry_id                     6WGO 
_atom_sites.fract_transf_matrix[1][1]    0.012771 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026298 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 201 1 NA NA . 
C 3 ACT A 1 202 10 ACT ACT . 
D 3 ACT A 1 203 11 ACT ACT . 
E 4 U0J A 1 204 1 U0J R9A . 
F 5 HOH A 1 301 92 HOH HOH . 
F 5 HOH A 2 302 25 HOH HOH . 
F 5 HOH A 3 303 96 HOH HOH . 
F 5 HOH A 4 304 44 HOH HOH . 
F 5 HOH A 5 305 62 HOH HOH . 
F 5 HOH A 6 306 67 HOH HOH . 
F 5 HOH A 7 307 18 HOH HOH . 
F 5 HOH A 8 308 43 HOH HOH . 
F 5 HOH A 9 309 84 HOH HOH . 
F 5 HOH A 10 310 85 HOH HOH . 
F 5 HOH A 11 311 3 HOH HOH . 
F 5 HOH A 12 312 90 HOH HOH . 
F 5 HOH A 13 313 15 HOH HOH . 
F 5 HOH A 14 314 51 HOH HOH . 
F 5 HOH A 15 315 2 HOH HOH . 
F 5 HOH A 16 316 37 HOH HOH . 
F 5 HOH A 17 317 38 HOH HOH . 
F 5 HOH A 18 318 23 HOH HOH . 
F 5 HOH A 19 319 14 HOH HOH . 
F 5 HOH A 20 320 50 HOH HOH . 
F 5 HOH A 21 321 76 HOH HOH . 
F 5 HOH A 22 322 2 HOH HOH . 
F 5 HOH A 23 323 68 HOH HOH . 
F 5 HOH A 24 324 83 HOH HOH . 
F 5 HOH A 25 325 4 HOH HOH . 
F 5 HOH A 26 326 16 HOH HOH . 
F 5 HOH A 27 327 24 HOH HOH . 
F 5 HOH A 28 328 19 HOH HOH . 
F 5 HOH A 29 329 3 HOH HOH . 
F 5 HOH A 30 330 20 HOH HOH . 
F 5 HOH A 31 331 61 HOH HOH . 
F 5 HOH A 32 332 9 HOH HOH . 
F 5 HOH A 33 333 95 HOH HOH . 
F 5 HOH A 34 334 45 HOH HOH . 
F 5 HOH A 35 335 6 HOH HOH . 
F 5 HOH A 36 336 57 HOH HOH . 
F 5 HOH A 37 337 54 HOH HOH . 
F 5 HOH A 38 338 26 HOH HOH . 
F 5 HOH A 39 339 12 HOH HOH . 
F 5 HOH A 40 340 34 HOH HOH . 
F 5 HOH A 41 341 29 HOH HOH . 
F 5 HOH A 42 342 63 HOH HOH . 
F 5 HOH A 43 343 48 HOH HOH . 
F 5 HOH A 44 344 47 HOH HOH . 
F 5 HOH A 45 345 36 HOH HOH . 
F 5 HOH A 46 346 53 HOH HOH . 
F 5 HOH A 47 347 5 HOH HOH . 
F 5 HOH A 48 348 10 HOH HOH . 
F 5 HOH A 49 349 35 HOH HOH . 
F 5 HOH A 50 350 41 HOH HOH . 
F 5 HOH A 51 351 66 HOH HOH . 
F 5 HOH A 52 352 91 HOH HOH . 
F 5 HOH A 53 353 1 HOH HOH . 
F 5 HOH A 54 354 65 HOH HOH . 
F 5 HOH A 55 355 32 HOH HOH . 
F 5 HOH A 56 356 13 HOH HOH . 
F 5 HOH A 57 357 72 HOH HOH . 
F 5 HOH A 58 358 49 HOH HOH . 
F 5 HOH A 59 359 64 HOH HOH . 
F 5 HOH A 60 360 33 HOH HOH . 
F 5 HOH A 61 361 70 HOH HOH . 
F 5 HOH A 62 362 60 HOH HOH . 
F 5 HOH A 63 363 40 HOH HOH . 
F 5 HOH A 64 364 89 HOH HOH . 
F 5 HOH A 65 365 46 HOH HOH . 
F 5 HOH A 66 366 42 HOH HOH . 
F 5 HOH A 67 367 81 HOH HOH . 
F 5 HOH A 68 368 27 HOH HOH . 
F 5 HOH A 69 369 17 HOH HOH . 
F 5 HOH A 70 370 39 HOH HOH . 
F 5 HOH A 71 371 82 HOH HOH . 
F 5 HOH A 72 372 58 HOH HOH . 
F 5 HOH A 73 373 52 HOH HOH . 
F 5 HOH A 74 374 7 HOH HOH . 
F 5 HOH A 75 375 11 HOH HOH . 
F 5 HOH A 76 376 28 HOH HOH . 
F 5 HOH A 77 377 8 HOH HOH . 
F 5 HOH A 78 378 71 HOH HOH . 
F 5 HOH A 79 379 22 HOH HOH . 
F 5 HOH A 80 380 69 HOH HOH . 
F 5 HOH A 81 381 79 HOH HOH . 
F 5 HOH A 82 382 30 HOH HOH . 
F 5 HOH A 83 383 59 HOH HOH . 
F 5 HOH A 84 384 78 HOH HOH . 
F 5 HOH A 85 385 73 HOH HOH . 
F 5 HOH A 86 386 21 HOH HOH . 
F 5 HOH A 87 387 86 HOH HOH . 
F 5 HOH A 88 388 74 HOH HOH . 
F 5 HOH A 89 389 77 HOH HOH . 
F 5 HOH A 90 390 56 HOH HOH . 
F 5 HOH A 91 391 31 HOH HOH . 
F 5 HOH A 92 392 55 HOH HOH . 
F 5 HOH A 93 393 88 HOH HOH . 
F 5 HOH A 94 394 87 HOH HOH . 
F 5 HOH A 95 395 80 HOH HOH . 
F 5 HOH A 96 396 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 U0J . . . E 4 14.728 -35.93 -15.362 0.8 21.16 ? C01 U0J 204 A 1 
HETATM 2 C C03 U0J . . . E 4 15.059 -36.99 -14.604 0.8 22.08 ? C03 U0J 204 A 1 
HETATM 3 C C05 U0J . . . E 4 12.81 -34.331 -15.566 0.8 20.45 ? C05 U0J 204 A 1 
HETATM 4 C C09 U0J . . . E 4 13.813 -38.232 -12.732 0.8 21.92 ? C09 U0J 204 A 1 
HETATM 5 C C12 U0J . . . E 4 14.984 -39.152 -12.597 0.8 22.39 ? C12 U0J 204 A 1 
HETATM 6 C C13 U0J . . . E 4 15.188 -40.176 -13.57 0.8 19.51 ? C13 U0J 204 A 1 
HETATM 7 C C14 U0J . . . E 4 14.381 -40.383 -14.731 0.8 18.97 ? C14 U0J 204 A 1 
HETATM 8 C C16 U0J . . . E 4 14.649 -41.351 -15.645 0.8 18.09 ? C16 U0J 204 A 1 
HETATM 9 C C18 U0J . . . E 4 15.732 -42.215 -15.468 0.8 20.85 ? C18 U0J 204 A 1 
HETATM 10 C C20 U0J . . . E 4 16.544 -42.068 -14.398 0.8 21.01 ? C20 U0J 204 A 1 
HETATM 11 C C22 U0J . . . E 4 16.312 -41.069 -13.427 0.8 21.33 ? C22 U0J 204 A 1 
HETATM 12 C C23 U0J . . . E 4 17.178 -40.923 -12.353 0.8 22.89 ? C23 U0J 204 A 1 
HETATM 13 C C25 U0J . . . E 4 16.979 -39.952 -11.39 0.8 24.41 ? C25 U0J 204 A 1 
HETATM 14 C C26 U0J . . . E 4 17.891 -39.848 -10.301 0.8 26.07 ? C26 U0J 204 A 1 
HETATM 15 C C28 U0J . . . E 4 17.732 -38.892 -9.368 0.8 27.26 ? C28 U0J 204 A 1 
HETATM 16 C C30 U0J . . . E 4 16.655 -37.987 -9.431 0.8 28.78 ? C30 U0J 204 A 1 
HETATM 17 C C32 U0J . . . E 4 15.759 -38.034 -10.445 0.8 25.27 ? C32 U0J 204 A 1 
HETATM 18 C C34 U0J . . . E 4 15.883 -38.999 -11.499 0.8 22.56 ? C34 U0J 204 A 1 
HETATM 19 N N35 U0J . . . E 4 13.5 -35.484 -14.982 0.8 20.18 ? N35 U0J 204 A 1 
HETATM 20 N N36 U0J . . . E 4 14.006 -37.217 -13.751 0.8 22.65 ? N36 U0J 204 A 1 
HETATM 21 CL CL37 U0J . . . E 4 12.313 -35.584 -10.913 0.8 34.87 ? CL37 U0J 204 A 1 
HETATM 22 CL CL38 U0J . . . E 4 11.126 -33.591 -13.012 0.8 45.11 ? CL38 U0J 204 A 1 
HETATM 23 RU RU39 U0J . . . E 4 11.063 -36.026 -12.937 0.8 22.48 ? RU39 U0J 204 A 1 
HETATM 24 C C43 U0J . . . E 4 13.095 -36.259 -14.001 0.8 19.9 ? C43 U0J 204 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#